BLASTX nr result

ID: Glycyrrhiza23_contig00013105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013105
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like...   292   5e-77
ref|XP_003523240.1| PREDICTED: RING-H2 finger protein ATL78-like...   291   7e-77
gb|ACU18824.1| unknown [Glycine max]                                  291   7e-77
gb|ACU18212.1| unknown [Glycine max]                                  290   2e-76
ref|XP_003602549.1| Ring-H2 zinc finger protein [Medicago trunca...   285   5e-75

>ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
          Length = 236

 Score =  292 bits (747), Expect = 5e-77
 Identities = 156/209 (74%), Positives = 171/209 (81%), Gaps = 7/209 (3%)
 Frame = +3

Query: 114 AATSFVSPLLHDLLEDFH-SRRLLLHSP-LNQXXXXXXXXXXTNGHDSTTTESSYLGDGN 287
           A+TS  SPLLHDL E+FH SRRLLLHSP LNQ           + HDS+T   +YLGDGN
Sbjct: 5   ASTSLTSPLLHDL-ENFHYSRRLLLHSPYLNQSAKPPR-----SSHDSST--ETYLGDGN 56

Query: 288 FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVI-----INNGDSAIPPARVANTGV 452
           FDANVVMVLSVLLCALICSLGLNSIIRCALRCSN V+      NN ++  P ARVANTGV
Sbjct: 57  FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGV 116

Query: 453 KKKALKTFPTVSYSAELNLNLPSLDSECVICLSDFTNGERVRILPKCNHGFHVRCIDKWL 632
           KKKALKTF TVSYSAELNL  PSLDSECVICLS+FT+GE+VRILPKCNHGFH+RCIDKWL
Sbjct: 117 KKKALKTFTTVSYSAELNL--PSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWL 174

Query: 633 SSHSSCPKCRQCLIGTCEKIVGCGQEQGN 719
           SSHSSCPKCRQCLI TC+KIVGC  +Q +
Sbjct: 175 SSHSSCPKCRQCLIETCQKIVGCSTQQAS 203


>ref|XP_003523240.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
          Length = 239

 Score =  291 bits (746), Expect = 7e-77
 Identities = 157/208 (75%), Positives = 171/208 (82%), Gaps = 6/208 (2%)
 Frame = +3

Query: 114 AATSFVSPLLHDLLEDFH-SRRLLLHSP-LNQXXXXXXXXXXTNGHDSTTTESSYLGDGN 287
           A+TSF SPLLHDL E+FH SRRLLLHSP LNQ          T+ HDST T   YLGDGN
Sbjct: 5   ASTSFTSPLLHDL-ENFHYSRRLLLHSPYLNQSEKPP-----TSSHDSTET---YLGDGN 55

Query: 288 FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVIIN----NGDSAIPPARVANTGVK 455
           FDANVVMVLSVLLCALICSLGLNSIIRCALRCSN V+ +    N ++    ARVANTGVK
Sbjct: 56  FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVK 115

Query: 456 KKALKTFPTVSYSAELNLNLPSLDSECVICLSDFTNGERVRILPKCNHGFHVRCIDKWLS 635
           KKALKTFPTVSYSAELNL  PSLDSECVICLS+FT+G++VRILPKCNH FHVRCIDKWLS
Sbjct: 116 KKALKTFPTVSYSAELNL--PSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLS 173

Query: 636 SHSSCPKCRQCLIGTCEKIVGCGQEQGN 719
           SHSSCPKCRQCLI TC+KIVGC  +Q +
Sbjct: 174 SHSSCPKCRQCLIETCQKIVGCSTQQAS 201


>gb|ACU18824.1| unknown [Glycine max]
          Length = 239

 Score =  291 bits (746), Expect = 7e-77
 Identities = 157/208 (75%), Positives = 171/208 (82%), Gaps = 6/208 (2%)
 Frame = +3

Query: 114 AATSFVSPLLHDLLEDFH-SRRLLLHSP-LNQXXXXXXXXXXTNGHDSTTTESSYLGDGN 287
           A+TSF SPLLHDL E+FH SRRLLLHSP LNQ          T+ HDST T   YLGDGN
Sbjct: 5   ASTSFTSPLLHDL-ENFHYSRRLLLHSPYLNQSEKPP-----TSSHDSTET---YLGDGN 55

Query: 288 FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVIIN----NGDSAIPPARVANTGVK 455
           FDANVVMVLSVLLCALICSLGLNSIIRCALRCSN V+ +    N ++    ARVANTGVK
Sbjct: 56  FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVK 115

Query: 456 KKALKTFPTVSYSAELNLNLPSLDSECVICLSDFTNGERVRILPKCNHGFHVRCIDKWLS 635
           KKALKTFPTVSYSAELNL  PSLDSECVICLS+FT+G++VRILPKCNH FHVRCIDKWLS
Sbjct: 116 KKALKTFPTVSYSAELNL--PSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLS 173

Query: 636 SHSSCPKCRQCLIGTCEKIVGCGQEQGN 719
           SHSSCPKCRQCLI TC+KIVGC  +Q +
Sbjct: 174 SHSSCPKCRQCLIETCQKIVGCSTQQAS 201


>gb|ACU18212.1| unknown [Glycine max]
          Length = 236

 Score =  290 bits (743), Expect = 2e-76
 Identities = 155/209 (74%), Positives = 170/209 (81%), Gaps = 7/209 (3%)
 Frame = +3

Query: 114 AATSFVSPLLHDLLEDFH-SRRLLLHSP-LNQXXXXXXXXXXTNGHDSTTTESSYLGDGN 287
           A+TS  SPLLHDL E+FH SRRLLLHSP LNQ           + HDS+T   +YLGDGN
Sbjct: 5   ASTSLTSPLLHDL-ENFHYSRRLLLHSPYLNQSAKPPR-----SSHDSST--ETYLGDGN 56

Query: 288 FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVI-----INNGDSAIPPARVANTGV 452
           FDANVVMVLSVLLC LICSLGLNSIIRCALRCSN V+      NN ++  P ARVANTGV
Sbjct: 57  FDANVVMVLSVLLCVLICSLGLNSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGV 116

Query: 453 KKKALKTFPTVSYSAELNLNLPSLDSECVICLSDFTNGERVRILPKCNHGFHVRCIDKWL 632
           KKKALKTF TVSYSAELNL  PSLDSECVICLS+FT+GE+VRILPKCNHGFH+RCIDKWL
Sbjct: 117 KKKALKTFTTVSYSAELNL--PSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWL 174

Query: 633 SSHSSCPKCRQCLIGTCEKIVGCGQEQGN 719
           SSHSSCPKCRQCLI TC+KIVGC  +Q +
Sbjct: 175 SSHSSCPKCRQCLIETCQKIVGCSTQQAS 203


>ref|XP_003602549.1| Ring-H2 zinc finger protein [Medicago truncatula]
           gi|355491597|gb|AES72800.1| Ring-H2 zinc finger protein
           [Medicago truncatula]
          Length = 240

 Score =  285 bits (730), Expect = 5e-75
 Identities = 149/198 (75%), Positives = 163/198 (82%), Gaps = 1/198 (0%)
 Frame = +3

Query: 108 MYAATSFVSPLLHDLLEDFHSRRLLLHSPLNQXXXXXXXXXXTNGHDSTTTESSYLGDGN 287
           MYA TSFVSPLLH+L+E+FHSRRLLLHS  +           T+ HDST  ESSY GDGN
Sbjct: 1   MYATTSFVSPLLHELVENFHSRRLLLHSSNSANPPIS-----TSIHDSTK-ESSYAGDGN 54

Query: 288 FDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVIINNGDSAIP-PARVANTGVKKKA 464
           FDANVVMVLSVLLCALICSL LNSIIRCAL+CSNLV+++   SA   P R ANTG+KKKA
Sbjct: 55  FDANVVMVLSVLLCALICSLCLNSIIRCALKCSNLVVMSGDRSANNIPVRAANTGIKKKA 114

Query: 465 LKTFPTVSYSAELNLNLPSLDSECVICLSDFTNGERVRILPKCNHGFHVRCIDKWLSSHS 644
           LK F TVSYS EL L  PSLDSECVICLS+FTNG++VR+LPKCNHGFHVRCIDKWLSSHS
Sbjct: 115 LKKFTTVSYSDELKL--PSLDSECVICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSSHS 172

Query: 645 SCPKCRQCLIGTCEKIVG 698
           SCPKCRQCLI TC KIVG
Sbjct: 173 SCPKCRQCLIETCNKIVG 190


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