BLASTX nr result

ID: Glycyrrhiza23_contig00013062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013062
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525005.1| PREDICTED: uncharacterized membrane protein ...   406   e-111
ref|XP_003531297.1| PREDICTED: uncharacterized membrane protein ...   398   e-108
ref|XP_002533021.1| Transcription factor RF2a, putative [Ricinus...   373   e-101
gb|ABK95886.1| unknown [Populus trichocarpa]                          360   5e-97
ref|XP_002304048.1| predicted protein [Populus trichocarpa] gi|2...   350   5e-94

>ref|XP_003525005.1| PREDICTED: uncharacterized membrane protein At4g06598-like [Glycine
            max]
          Length = 375

 Score =  406 bits (1044), Expect = e-111
 Identities = 205/285 (71%), Positives = 229/285 (80%), Gaps = 1/285 (0%)
 Frame = +2

Query: 341  MANLKGSPGIRNLMYSGKHALLPPKIPFPIVSNLYADHMPKPTNGSKIAQKPSEGNPHHH 520
            MAN KGS G RN MY GKH LLPPK PFP VS  YAD++P P  G K   +P +GN HH 
Sbjct: 1    MANSKGSSGFRNFMYPGKHPLLPPKSPFPSVSQAYADYVPNPAVGLKAGNRPRDGNTHHQ 60

Query: 521  RTSSESLVMDEHPSWLDDLLNEPETPVRKGGHRRSSSDSFAYSDA-NVSNISYADQDEYK 697
            RTSSESLV++E PSWLDDLLNEPETPVR+GGHRRSSSDSFAY D  N SNI+YA+QDEYK
Sbjct: 61   RTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNINYANQDEYK 120

Query: 698  FRNLTYIPSWSSHSQDFDHGKGARQILSCAEMNSTKLKNRAWDSCLNSVTHPGGVLSGKD 877
            ++N+  IPSWSS  QDFD  K AR +   AEMNS K KNR+WDS  N++T+P GV SGKD
Sbjct: 121  YKNMMSIPSWSS--QDFDRSKDARHVPVYAEMNSVKQKNRSWDSFSNAMTNPVGVPSGKD 178

Query: 878  NVASWSSGLSCPPHEADGVPSTANEKHDSVESGAQDAKSFPDRKDGSNANSSASETDTKR 1057
            + A  SSGL C PHEADG+P  ++EKHDSVESG QDAK FP++KD S+A SSASETDTKR
Sbjct: 179  SAAFQSSGLQCTPHEADGLPPASSEKHDSVESGLQDAKPFPEKKDSSHAKSSASETDTKR 238

Query: 1058 TKQQFAQRSRVRKLQYIAELERNVQGLQAEGSGVSAELEFLNQQN 1192
             KQQFAQRSRVRKLQYIAELERNVQ LQAEGS VSAELEFLNQQN
Sbjct: 239  AKQQFAQRSRVRKLQYIAELERNVQVLQAEGSEVSAELEFLNQQN 283


>ref|XP_003531297.1| PREDICTED: uncharacterized membrane protein At4g06598 [Glycine max]
          Length = 376

 Score =  398 bits (1022), Expect = e-108
 Identities = 202/285 (70%), Positives = 225/285 (78%), Gaps = 1/285 (0%)
 Frame = +2

Query: 341  MANLKGSPGIRNLMYSGKHALLPPKIPFPIVSNLYADHMPKPTNGSKIAQKPSEGNPHHH 520
            MAN KGS   RN MY GKH LLPPK PFP VS  YAD++P P  G K   +P +GN HH 
Sbjct: 1    MANSKGSSSFRNFMYPGKHPLLPPKSPFPSVSQAYADYVPNPAVGLKAGNRPRDGNTHHQ 60

Query: 521  RTSSESLVMDEHPSWLDDLLNEPETPVRKGGHRRSSSDSFAYSDA-NVSNISYADQDEYK 697
            RTSSESLV++E PSWLDDLLNEPETPVR+GGHRRSSSDSFAY D  N SN++YA QDEYK
Sbjct: 61   RTSSESLVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNLNYASQDEYK 120

Query: 698  FRNLTYIPSWSSHSQDFDHGKGARQILSCAEMNSTKLKNRAWDSCLNSVTHPGGVLSGKD 877
            ++N+  IP WS   QDFD  K AR +   AEMNSTK KNR+WDS  N++T+P GV SGKD
Sbjct: 121  YKNMMSIPPWSP--QDFDCSKDARHVPVYAEMNSTKQKNRSWDSFSNAMTNPVGVPSGKD 178

Query: 878  NVASWSSGLSCPPHEADGVPSTANEKHDSVESGAQDAKSFPDRKDGSNANSSASETDTKR 1057
            + A  SSGL C PHEAD +P  A+EKHDSVE G QDAKSFP++KD S+A SSASETDTKR
Sbjct: 179  SAAFQSSGLQCTPHEADALPPAASEKHDSVELGLQDAKSFPEKKDISHAKSSASETDTKR 238

Query: 1058 TKQQFAQRSRVRKLQYIAELERNVQGLQAEGSGVSAELEFLNQQN 1192
             KQQFAQRSRVRKLQYIAELERNVQ LQAEGS VSAELEFLNQQN
Sbjct: 239  AKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQN 283


>ref|XP_002533021.1| Transcription factor RF2a, putative [Ricinus communis]
            gi|223527183|gb|EEF29352.1| Transcription factor RF2a,
            putative [Ricinus communis]
          Length = 380

 Score =  373 bits (958), Expect = e-101
 Identities = 188/286 (65%), Positives = 222/286 (77%), Gaps = 2/286 (0%)
 Frame = +2

Query: 341  MANLKGSPGIRNLMYSGKHALLPPKIPFPIVSNLYADHMPKPTNGSKIAQKPSEGNPHHH 520
            MAN KGSP +RNLMYSGKHALLPPKIPFP VS  Y D++P    GSK  Q+P EGN HH 
Sbjct: 1    MANSKGSPNVRNLMYSGKHALLPPKIPFPSVSPSYVDYVPSNVIGSKAVQRPREGNAHHQ 60

Query: 521  RTSSESLVMDEHPSWLDDLLNEPETPVRKGGHRRSSSDSFAYSD-ANVSNISYADQDEYK 697
            RTSSE+L+++E PSWLDDLLNEPETPVR+GGHRRSSSDSFAY D ANVSNI Y+ QD+Y+
Sbjct: 61   RTSSETLLIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDVANVSNIDYSTQDDYR 120

Query: 698  FRNL-TYIPSWSSHSQDFDHGKGARQILSCAEMNSTKLKNRAWDSCLNSVTHPGGVLSGK 874
            ++N+ + +PSW    QD+D+ K ARQ+  CA++N +K KNR W+S LN      G+ S +
Sbjct: 121  YKNMMSVLPSWGP--QDYDYHKDARQVSLCADVNMSKQKNRTWESSLNPAARQSGLPSSR 178

Query: 875  DNVASWSSGLSCPPHEADGVPSTANEKHDSVESGAQDAKSFPDRKDGSNANSSASETDTK 1054
            +N  S SS  SC   EADG+ S+ +EK DS ESG  D+K+  DRKDG +A SS SETDTK
Sbjct: 179  ENAVSQSSVSSCALQEADGIQSSLSEKQDSAESGPHDSKASSDRKDGCHAKSSVSETDTK 238

Query: 1055 RTKQQFAQRSRVRKLQYIAELERNVQGLQAEGSGVSAELEFLNQQN 1192
            R KQQFAQRSRVRKLQYIAELERNVQ LQAEGS VSAE+EFLNQQN
Sbjct: 239  RAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAEVEFLNQQN 284


>gb|ABK95886.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  360 bits (923), Expect = 5e-97
 Identities = 189/285 (66%), Positives = 215/285 (75%), Gaps = 1/285 (0%)
 Frame = +2

Query: 341  MANLKGSPGIRNLMYSGKHALLPPKIPFPIVSNLYADHMPKPTNGSKIAQKPSEGNPHHH 520
            MAN KGS  IRNLMYSGKH LLPPK PFP VS  Y DH+P  + GSK AQKP EGN HH 
Sbjct: 1    MANSKGSANIRNLMYSGKHPLLPPKSPFPSVSPSYIDHVPSNSFGSKTAQKPREGNTHHQ 60

Query: 521  RTSSESLVMDEHPSWLDDLLNEPETPVRKGGHRRSSSDSFAYSD-ANVSNISYADQDEYK 697
            RTSSE+L ++E PSWLDDLLNEPETPVR+GGHRRSSSDSFAY D AN SNI YA+QD+Y 
Sbjct: 61   RTSSETLFIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDVANASNIDYAEQDDYM 120

Query: 698  FRNLTYIPSWSSHSQDFDHGKGARQILSCAEMNSTKLKNRAWDSCLNSVTHPGGVLSGKD 877
            ++N+  IPSW SH  DFDH +  RQ    +EMN TK KNR WDS LN+ T P  + S ++
Sbjct: 121  YKNVMSIPSWRSH--DFDHHQDVRQASLYSEMNLTKQKNRVWDSSLNAPTFPSSLSSVRE 178

Query: 878  NVASWSSGLSCPPHEADGVPSTANEKHDSVESGAQDAKSFPDRKDGSNANSSASETDTKR 1057
            N    SSG SC P EAD V  + +EK D ++ G  D K   ++KD SN+ SSAS+TDTKR
Sbjct: 179  NAGMQSSGSSCAPREADCV--SESEKQDPLD-GPHDPKISLEKKDSSNSKSSASDTDTKR 235

Query: 1058 TKQQFAQRSRVRKLQYIAELERNVQGLQAEGSGVSAELEFLNQQN 1192
             KQQFAQRSRVRKLQYIAELERNVQ LQAEGS VSAELEF+NQQN
Sbjct: 236  AKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFVNQQN 280


>ref|XP_002304048.1| predicted protein [Populus trichocarpa] gi|222841480|gb|EEE79027.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  350 bits (897), Expect = 5e-94
 Identities = 189/297 (63%), Positives = 215/297 (72%), Gaps = 13/297 (4%)
 Frame = +2

Query: 341  MANLKGSPGIRNLMYSGKHALLPPKIPFPIVSNLYADHMPKPTNGSKIAQKPSEGNPHHH 520
            MAN KGS  IRNLMYSGKH LLPPK PFP VS  Y DH+P  + GSK AQKP EGN HH 
Sbjct: 1    MANSKGSANIRNLMYSGKHPLLPPKSPFPSVSPSYIDHVPSNSFGSKTAQKPREGNTHHQ 60

Query: 521  RTSSESLVMDEHPSWLDDLLNEPETPVRKGGHRRSSSDSFAYSD-ANVSNISYADQDEYK 697
            RTSSE+L ++E PSWLDDLLNEPETPVR+GGHRRSSSDSFAY D AN SNI YA+QD+Y 
Sbjct: 61   RTSSETLFIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDVANASNIDYAEQDDYI 120

Query: 698  FRNLTYIPSWSSHSQDFDHGKGARQILSCAEMNSTKLKNRAWDSCLNSVTHPGGVLSGKD 877
            ++N+  IPSW SH  DFDH +  RQ    +EMN TK KNR WDS LN+ T P  + S ++
Sbjct: 121  YKNVMSIPSWRSH--DFDHHQDVRQASLYSEMNLTKQKNRVWDSSLNAPTFPSSLSSVRE 178

Query: 878  NVASWSSGLSCPPHEADGVPSTANEKHDSVESGAQDAKSFPDRKDGSNANSSASETDTKR 1057
            N    SSG SC P EAD V  + +EK D ++ G  D K   ++KD SN+ SSAS+TDTKR
Sbjct: 179  NAGMRSSGSSCAPREADCV--SESEKQDPLD-GPHDPKISLEKKDSSNSKSSASDTDTKR 235

Query: 1058 TKQQFAQRSRVRKLQYIAELERNVQGLQ------------AEGSGVSAELEFLNQQN 1192
             KQQFAQRSRVRKLQYIAELERNVQ LQ            AEGS VSAELEF+NQQN
Sbjct: 236  AKQQFAQRSRVRKLQYIAELERNVQALQASISISAEAACEAEGSEVSAELEFVNQQN 292


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