BLASTX nr result

ID: Glycyrrhiza23_contig00013011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013011
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatu...   201   4e-50
ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glyci...   192   3e-47
ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glyci...   191   7e-47
emb|CBI22299.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis...   142   4e-32

>ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatula]
           gi|355493734|gb|AES74937.1| Sister chromatid cohesion
           [Medicago truncatula]
          Length = 1167

 Score =  201 bits (512), Expect = 4e-50
 Identities = 100/120 (83%), Positives = 109/120 (90%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   GISLSNTIHSEVASCLPLPSLPVFCGASDQDLRLFDSPMLLNRVDILAQSGKIAEMLRHT 181
           GIS++NT+HSEVASCLPLPSLPVFCGASD +LRLFDSP+ LNRV+IL+QS KIAEMLR+T
Sbjct: 21  GISMANTVHSEVASCLPLPSLPVFCGASDHNLRLFDSPLPLNRVEILSQSSKIAEMLRNT 80

Query: 182 DVSYLNLRDDA-GAPYNYVEPLELHDEVLRCNPEAFECSAGGPVKEQISGSALPEKKLFE 358
           DVSYLNLRDDA   PYNY EPLELHDEVLRCNPEAFECS  GPVKE+ISGSALPE KL E
Sbjct: 81  DVSYLNLRDDAKTVPYNYAEPLELHDEVLRCNPEAFECSHEGPVKEKISGSALPETKLSE 140


>ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1655

 Score =  192 bits (487), Expect = 3e-47
 Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   GISLSNTIHSEVASCLPLPSLPVFCGASDQDLRLFDSPMLLNRVDILAQSGKIAEMLRHT 181
           GI LSNT+HSE+A+CLPLPSLPVFCGASDQDLRL DSP  LNRVD+LAQS KIAE+LRHT
Sbjct: 19  GIGLSNTVHSELAACLPLPSLPVFCGASDQDLRLVDSPARLNRVDVLAQSAKIAELLRHT 78

Query: 182 DVSYLNLRDDA-GAPYNYVEPLELHDEVLRCNPEAFECSAGGPVKEQISGS-ALPEKKLF 355
           DVSYLNLRD+A G PY YVEPLELHDEVLRCNPEAFE S  G VKEQISGS A+PEK+  
Sbjct: 79  DVSYLNLRDEAKGVPYIYVEPLELHDEVLRCNPEAFEYSTAGHVKEQISGSAAVPEKRQS 138

Query: 356 E 358
           E
Sbjct: 139 E 139


>ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1723

 Score =  191 bits (484), Expect = 7e-47
 Identities = 94/117 (80%), Positives = 103/117 (88%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   GISLSNTIHSEVASCLPLPSLPVFCGASDQDLRLFDSPMLLNRVDILAQSGKIAEMLRHT 181
           GI LSNT+HSE+A+CLPLPSLPVFCGASDQDLRL DSP  LNRVD+LAQS KIAE+LRHT
Sbjct: 21  GIGLSNTVHSELAACLPLPSLPVFCGASDQDLRLVDSPARLNRVDVLAQSAKIAELLRHT 80

Query: 182 DVSYLNLRDDA-GAPYNYVEPLELHDEVLRCNPEAFECSAGGPVKEQISGSALPEKK 349
           DVSYLNLR +A G PY YVEPLELHDEV+RCNPEAFE S  GPVKEQI GSA+ EK+
Sbjct: 81  DVSYLNLRGEAKGVPYIYVEPLELHDEVIRCNPEAFEYSTAGPVKEQIYGSAVSEKR 137


>emb|CBI22299.3| unnamed protein product [Vitis vinifera]
          Length = 1748

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/114 (65%), Positives = 88/114 (77%), Gaps = 4/114 (3%)
 Frame = +2

Query: 2   GISLSNTIHSEVASCLPLPSLPVFCGASDQDLRLFDSP---MLLNRVDILAQSGKIAEML 172
           GI LSNTIHSEVA CLPLPSLPVFCGA DQ+LRLFD P     LNR D+++Q+ +IA++L
Sbjct: 20  GIGLSNTIHSEVAPCLPLPSLPVFCGAYDQELRLFDEPRNARSLNRRDVISQASRIADLL 79

Query: 173 RHTDVSYLNLRDD-AGAPYNYVEPLELHDEVLRCNPEAFECSAGGPVKEQISGS 331
           R TD+SYLNLRDD    PY +VEPL L+DEV+RCNPEAFE     PV + IS S
Sbjct: 80  RETDISYLNLRDDECSFPYGFVEPLVLYDEVVRCNPEAFEYIT--PVSQVISRS 131


>ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis vinifera]
          Length = 1967

 Score =  142 bits (357), Expect = 4e-32
 Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 4/100 (4%)
 Frame = +2

Query: 2   GISLSNTIHSEVASCLPLPSLPVFCGASDQDLRLFDSP---MLLNRVDILAQSGKIAEML 172
           GI LSNTIHSEVA CLPLPSLPVFCGA DQ+LRLFD P     LNR D+++Q+ +IA++L
Sbjct: 20  GIGLSNTIHSEVAPCLPLPSLPVFCGAYDQELRLFDEPRNARSLNRRDVISQASRIADLL 79

Query: 173 RHTDVSYLNLRDD-AGAPYNYVEPLELHDEVLRCNPEAFE 289
           R TD+SYLNLRDD    PY +VEPL L+DEV+RCNPEAFE
Sbjct: 80  RETDISYLNLRDDECSFPYGFVEPLVLYDEVVRCNPEAFE 119


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