BLASTX nr result

ID: Glycyrrhiza23_contig00012939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012939
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532662.1| PREDICTED: RING-H2 finger protein ATL73-like...   134   1e-29
ref|XP_003524127.1| PREDICTED: RING-H2 finger protein ATL44-like...   118   4e-25
ref|XP_003547414.1| PREDICTED: RING-H2 finger protein ATL73-like...   115   3e-24
ref|XP_002304266.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002326634.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22

>ref|XP_003532662.1| PREDICTED: RING-H2 finger protein ATL73-like [Glycine max]
          Length = 168

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/111 (63%), Positives = 81/111 (72%)
 Frame = -1

Query: 333 MAETHNSHSQPPYTPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLNT 154
           MAET +    P  +P    GPIIS          QV GFDW+VLVAAILCAFVCALGLNT
Sbjct: 1   MAETPS----PSESPTASFGPIISNG--------QVGGFDWIVLVAAILCAFVCALGLNT 48

Query: 153 MLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALPISTYSHSDSGSPS 1
           MLQCVFQC  RV+TEP QWIASRR+NSG+K+KEMVALP STY+ + S + S
Sbjct: 49  MLQCVFQCACRVLTEPRQWIASRRLNSGLKKKEMVALPTSTYTTTHSAAAS 99


>ref|XP_003524127.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max]
          Length = 162

 Score =  118 bits (296), Expect = 4e-25
 Identities = 72/111 (64%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
 Frame = -1

Query: 333 MAETHN-SHSQPPYTPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLN 157
           MAET + S SQ P  P    GPIIS          QV GFDWMVL+AAILCAFVCALGLN
Sbjct: 1   MAETPSPSLSQSPSPP---FGPIISDG--------QVGGFDWMVLLAAILCAFVCALGLN 49

Query: 156 TMLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALPISTY-SHSDSGS 7
           TMLQC      RV TEP QWIASRR+NSG+KRKEMVALP STY +HS + S
Sbjct: 50  TMLQCAC----RVFTEPRQWIASRRLNSGLKRKEMVALPTSTYTTHSSAAS 96


>ref|XP_003547414.1| PREDICTED: RING-H2 finger protein ATL73-like [Glycine max]
          Length = 169

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/111 (56%), Positives = 76/111 (68%)
 Frame = -1

Query: 333 MAETHNSHSQPPYTPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLNT 154
           MAETH+    P  TP   + P  S           +     MV++A I+CAF+CALGLNT
Sbjct: 1   MAETHSFTHTPLITPT--ISPTRSKPCNPPEHSINL-----MVVLAVIVCAFLCALGLNT 53

Query: 153 MLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALPISTYSHSDSGSPS 1
           MLQCVFQC  RV+TEPLQWIASRR+NSG+K++EMVALP STY+HS   SPS
Sbjct: 54  MLQCVFQCANRVLTEPLQWIASRRLNSGLKKREMVALPTSTYTHS-CASPS 103


>ref|XP_002304266.1| predicted protein [Populus trichocarpa] gi|222841698|gb|EEE79245.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -1

Query: 294 TPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLNTMLQCVFQCVGRVV 115
           +P+  L P +S         +    F+ MV+VAA+LCAFVCALGLN+MLQCVFQC  R V
Sbjct: 5   SPSPTLSPTVSAPSCHDQSQEPTMDFNVMVIVAAMLCAFVCALGLNSMLQCVFQCTQRTV 64

Query: 114 TEPLQWIASRRVNSGIKRKEMVALPISTYSHSDSGSPS 1
           TE   WI+SRR NSG+K++EMV LP STY+H   GSPS
Sbjct: 65  TETAGWISSRRQNSGLKKREMVGLPTSTYAH--QGSPS 100


>ref|XP_002326634.1| predicted protein [Populus trichocarpa] gi|222833956|gb|EEE72433.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/73 (71%), Positives = 62/73 (84%)
 Frame = -1

Query: 219 FDWMVLVAAILCAFVCALGLNTMLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALP 40
           F+ MV+VAA++CA VCALGLN+MLQCVFQC  R VTEP +WI+SRR NSG+K+KEMVALP
Sbjct: 3   FNVMVIVAAMICALVCALGLNSMLQCVFQCTRRAVTEPAEWISSRRRNSGLKKKEMVALP 62

Query: 39  ISTYSHSDSGSPS 1
            STY+H   GSPS
Sbjct: 63  TSTYAH--QGSPS 73


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