BLASTX nr result
ID: Glycyrrhiza23_contig00012939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00012939 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532662.1| PREDICTED: RING-H2 finger protein ATL73-like... 134 1e-29 ref|XP_003524127.1| PREDICTED: RING-H2 finger protein ATL44-like... 118 4e-25 ref|XP_003547414.1| PREDICTED: RING-H2 finger protein ATL73-like... 115 3e-24 ref|XP_002304266.1| predicted protein [Populus trichocarpa] gi|2... 108 3e-22 ref|XP_002326634.1| predicted protein [Populus trichocarpa] gi|2... 108 3e-22 >ref|XP_003532662.1| PREDICTED: RING-H2 finger protein ATL73-like [Glycine max] Length = 168 Score = 134 bits (336), Expect = 1e-29 Identities = 71/111 (63%), Positives = 81/111 (72%) Frame = -1 Query: 333 MAETHNSHSQPPYTPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLNT 154 MAET + P +P GPIIS QV GFDW+VLVAAILCAFVCALGLNT Sbjct: 1 MAETPS----PSESPTASFGPIISNG--------QVGGFDWIVLVAAILCAFVCALGLNT 48 Query: 153 MLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALPISTYSHSDSGSPS 1 MLQCVFQC RV+TEP QWIASRR+NSG+K+KEMVALP STY+ + S + S Sbjct: 49 MLQCVFQCACRVLTEPRQWIASRRLNSGLKKKEMVALPTSTYTTTHSAAAS 99 >ref|XP_003524127.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max] Length = 162 Score = 118 bits (296), Expect = 4e-25 Identities = 72/111 (64%), Positives = 78/111 (70%), Gaps = 2/111 (1%) Frame = -1 Query: 333 MAETHN-SHSQPPYTPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLN 157 MAET + S SQ P P GPIIS QV GFDWMVL+AAILCAFVCALGLN Sbjct: 1 MAETPSPSLSQSPSPP---FGPIISDG--------QVGGFDWMVLLAAILCAFVCALGLN 49 Query: 156 TMLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALPISTY-SHSDSGS 7 TMLQC RV TEP QWIASRR+NSG+KRKEMVALP STY +HS + S Sbjct: 50 TMLQCAC----RVFTEPRQWIASRRLNSGLKRKEMVALPTSTYTTHSSAAS 96 >ref|XP_003547414.1| PREDICTED: RING-H2 finger protein ATL73-like [Glycine max] Length = 169 Score = 115 bits (289), Expect = 3e-24 Identities = 63/111 (56%), Positives = 76/111 (68%) Frame = -1 Query: 333 MAETHNSHSQPPYTPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLNT 154 MAETH+ P TP + P S + MV++A I+CAF+CALGLNT Sbjct: 1 MAETHSFTHTPLITPT--ISPTRSKPCNPPEHSINL-----MVVLAVIVCAFLCALGLNT 53 Query: 153 MLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALPISTYSHSDSGSPS 1 MLQCVFQC RV+TEPLQWIASRR+NSG+K++EMVALP STY+HS SPS Sbjct: 54 MLQCVFQCANRVLTEPLQWIASRRLNSGLKKREMVALPTSTYTHS-CASPS 103 >ref|XP_002304266.1| predicted protein [Populus trichocarpa] gi|222841698|gb|EEE79245.1| predicted protein [Populus trichocarpa] Length = 166 Score = 108 bits (271), Expect = 3e-22 Identities = 55/98 (56%), Positives = 68/98 (69%) Frame = -1 Query: 294 TPNTGLGPIISXXXXXXXXXDQVAGFDWMVLVAAILCAFVCALGLNTMLQCVFQCVGRVV 115 +P+ L P +S + F+ MV+VAA+LCAFVCALGLN+MLQCVFQC R V Sbjct: 5 SPSPTLSPTVSAPSCHDQSQEPTMDFNVMVIVAAMLCAFVCALGLNSMLQCVFQCTQRTV 64 Query: 114 TEPLQWIASRRVNSGIKRKEMVALPISTYSHSDSGSPS 1 TE WI+SRR NSG+K++EMV LP STY+H GSPS Sbjct: 65 TETAGWISSRRQNSGLKKREMVGLPTSTYAH--QGSPS 100 >ref|XP_002326634.1| predicted protein [Populus trichocarpa] gi|222833956|gb|EEE72433.1| predicted protein [Populus trichocarpa] Length = 138 Score = 108 bits (271), Expect = 3e-22 Identities = 52/73 (71%), Positives = 62/73 (84%) Frame = -1 Query: 219 FDWMVLVAAILCAFVCALGLNTMLQCVFQCVGRVVTEPLQWIASRRVNSGIKRKEMVALP 40 F+ MV+VAA++CA VCALGLN+MLQCVFQC R VTEP +WI+SRR NSG+K+KEMVALP Sbjct: 3 FNVMVIVAAMICALVCALGLNSMLQCVFQCTRRAVTEPAEWISSRRRNSGLKKKEMVALP 62 Query: 39 ISTYSHSDSGSPS 1 STY+H GSPS Sbjct: 63 TSTYAH--QGSPS 73