BLASTX nr result

ID: Glycyrrhiza23_contig00012938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012938
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   177   2e-42
ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1...   170   2e-40
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   137   2e-30
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   132   4e-29
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              132   4e-29

>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  177 bits (448), Expect = 2e-42
 Identities = 85/122 (69%), Positives = 99/122 (81%)
 Frame = +3

Query: 3   DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182
           D+RRNQ+ LKPEPIAEL+GH G VT LH+D YKIVTGGP  AYVNVWEV TG +TNSLLC
Sbjct: 376 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 435

Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKLENEPPSKFWVR 362
             T+  G  SGCDA+ VDGCRI TAS ++D G+LR+ DFN+AT PVTKLENEP SKFW+ 
Sbjct: 436 SSTDDAG--SGCDAMTVDGCRITTASYYEDLGVLRFRDFNHATNPVTKLENEPSSKFWIS 493

Query: 363 LS 368
           +S
Sbjct: 494 MS 495


>ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max]
          Length = 452

 Score =  170 bits (430), Expect = 2e-40
 Identities = 85/123 (69%), Positives = 98/123 (79%), Gaps = 1/123 (0%)
 Frame = +3

Query: 3   DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182
           D+RRNQ+ LKPEPIAEL+GH G VT LH+D YKIVTGGP  AYVNVWEV TG +TNSLLC
Sbjct: 326 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 385

Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFN-NATRPVTKLENEPPSKFWV 359
            LT  DG  SGCDA+AVDGCRI T S  +D G+L + D+N +AT PVTKLENEP SKFW+
Sbjct: 386 SLT--DGAGSGCDAMAVDGCRITTTSYSEDSGVLCFRDYNHDATNPVTKLENEPSSKFWI 443

Query: 360 RLS 368
            +S
Sbjct: 444 SMS 446


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  137 bits (344), Expect = 2e-30
 Identities = 67/120 (55%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182
           DIR NQ+ LKPEP+AEL+GH+GPVT LH+D YKIVTGGP  +Y+NVWE  TG +TNS +C
Sbjct: 367 DIRINQETLKPEPVAELDGHTGPVTLLHMDPYKIVTGGPEDSYINVWETDTGAQTNSFIC 426

Query: 183 CLTEIDGGIS--GCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKLENEPPSKFW 356
           C ++     S  GC A+AV+G RI TAS  ++ G++ + DF NAT  V+K E+   SKFW
Sbjct: 427 CPSDAASSSSGMGCSAMAVNGTRIVTASYGEEHGLVCFRDFFNATCAVSKREDVLASKFW 486


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  132 bits (333), Expect = 4e-29
 Identities = 64/119 (53%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182
           DIR++Q+ LKPEP+ E++GH+GPVT LH+D YKIVTGGP   +VNVWE+ TG +TN+L C
Sbjct: 363 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 422

Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKL-ENEPPSKFW 356
              E      GC A+A DGCRI TAS   + G++ + DF +AT PV+   E++P SKFW
Sbjct: 423 SSDEGPNSNPGCSAMAADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFW 481


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  132 bits (333), Expect = 4e-29
 Identities = 64/119 (53%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182
           DIR++Q+ LKPEP+ E++GH+GPVT LH+D YKIVTGGP   +VNVWE+ TG +TN+L C
Sbjct: 360 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 419

Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKL-ENEPPSKFW 356
              E      GC A+A DGCRI TAS   + G++ + DF +AT PV+   E++P SKFW
Sbjct: 420 SSDEGPNSNPGCSAMAADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFW 478


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