BLASTX nr result
ID: Glycyrrhiza23_contig00012938
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00012938 (634 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly... 177 2e-42 ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1... 170 2e-40 ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g... 137 2e-30 ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c... 132 4e-29 emb|CBI22162.3| unnamed protein product [Vitis vinifera] 132 4e-29 >ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max] Length = 501 Score = 177 bits (448), Expect = 2e-42 Identities = 85/122 (69%), Positives = 99/122 (81%) Frame = +3 Query: 3 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182 D+RRNQ+ LKPEPIAEL+GH G VT LH+D YKIVTGGP AYVNVWEV TG +TNSLLC Sbjct: 376 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 435 Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKLENEPPSKFWVR 362 T+ G SGCDA+ VDGCRI TAS ++D G+LR+ DFN+AT PVTKLENEP SKFW+ Sbjct: 436 SSTDDAG--SGCDAMTVDGCRITTASYYEDLGVLRFRDFNHATNPVTKLENEPSSKFWIS 493 Query: 363 LS 368 +S Sbjct: 494 MS 495 >ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max] Length = 452 Score = 170 bits (430), Expect = 2e-40 Identities = 85/123 (69%), Positives = 98/123 (79%), Gaps = 1/123 (0%) Frame = +3 Query: 3 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182 D+RRNQ+ LKPEPIAEL+GH G VT LH+D YKIVTGGP AYVNVWEV TG +TNSLLC Sbjct: 326 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 385 Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFN-NATRPVTKLENEPPSKFWV 359 LT DG SGCDA+AVDGCRI T S +D G+L + D+N +AT PVTKLENEP SKFW+ Sbjct: 386 SLT--DGAGSGCDAMAVDGCRITTTSYSEDSGVLCFRDYNHDATNPVTKLENEPSSKFWI 443 Query: 360 RLS 368 +S Sbjct: 444 SMS 446 >ref|XP_002324039.1| f-box family protein [Populus trichocarpa] gi|222867041|gb|EEF04172.1| f-box family protein [Populus trichocarpa] Length = 498 Score = 137 bits (344), Expect = 2e-30 Identities = 67/120 (55%), Positives = 87/120 (72%), Gaps = 2/120 (1%) Frame = +3 Query: 3 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182 DIR NQ+ LKPEP+AEL+GH+GPVT LH+D YKIVTGGP +Y+NVWE TG +TNS +C Sbjct: 367 DIRINQETLKPEPVAELDGHTGPVTLLHMDPYKIVTGGPEDSYINVWETDTGAQTNSFIC 426 Query: 183 CLTEIDGGIS--GCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKLENEPPSKFW 356 C ++ S GC A+AV+G RI TAS ++ G++ + DF NAT V+K E+ SKFW Sbjct: 427 CPSDAASSSSGMGCSAMAVNGTRIVTASYGEEHGLVCFRDFFNATCAVSKREDVLASKFW 486 >ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera] Length = 494 Score = 132 bits (333), Expect = 4e-29 Identities = 64/119 (53%), Positives = 85/119 (71%), Gaps = 1/119 (0%) Frame = +3 Query: 3 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182 DIR++Q+ LKPEP+ E++GH+GPVT LH+D YKIVTGGP +VNVWE+ TG +TN+L C Sbjct: 363 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 422 Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKL-ENEPPSKFW 356 E GC A+A DGCRI TAS + G++ + DF +AT PV+ E++P SKFW Sbjct: 423 SSDEGPNSNPGCSAMAADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFW 481 >emb|CBI22162.3| unnamed protein product [Vitis vinifera] Length = 491 Score = 132 bits (333), Expect = 4e-29 Identities = 64/119 (53%), Positives = 85/119 (71%), Gaps = 1/119 (0%) Frame = +3 Query: 3 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 182 DIR++Q+ LKPEP+ E++GH+GPVT LH+D YKIVTGGP +VNVWE+ TG +TN+L C Sbjct: 360 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 419 Query: 183 CLTEIDGGISGCDAIAVDGCRIATASRWKDWGILRYWDFNNATRPVTKL-ENEPPSKFW 356 E GC A+A DGCRI TAS + G++ + DF +AT PV+ E++P SKFW Sbjct: 420 SSDEGPNSNPGCSAMAADGCRIVTASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFW 478