BLASTX nr result

ID: Glycyrrhiza23_contig00012906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012906
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535743.1| PREDICTED: tubulin-specific chaperone D-like...   149   3e-34
ref|XP_003555220.1| PREDICTED: tubulin-specific chaperone D-like...   143   1e-32
ref|XP_002511682.1| beta-tubulin cofactor d, putative [Ricinus c...   120   9e-26
ref|XP_002320715.1| tubulin folding cofactor [Populus trichocarp...   119   3e-25
ref|XP_002274584.2| PREDICTED: tubulin-specific chaperone D isof...   117   1e-24

>ref|XP_003535743.1| PREDICTED: tubulin-specific chaperone D-like [Glycine max]
          Length = 1266

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/83 (86%), Positives = 78/83 (93%)
 Frame = -3

Query: 251  FLGHRFPKIRKASAEQVYLVLLQNGNLVAEDKIEKALEIISETCWDGDMDLAKHQRLELF 72
            FLGHR+PKIRKASAEQ+YLVLL+NGNLVAEDKI+KALEIISETCWDGDMD AKHQRL+L+
Sbjct: 1163 FLGHRYPKIRKASAEQLYLVLLENGNLVAEDKIDKALEIISETCWDGDMDSAKHQRLKLY 1222

Query: 71   ETVGLEVGPLGKNSDGTPRKTSS 3
            E VGLEVG LG NSDGT RKTSS
Sbjct: 1223 EIVGLEVGSLGNNSDGTSRKTSS 1245


>ref|XP_003555220.1| PREDICTED: tubulin-specific chaperone D-like [Glycine max]
          Length = 1257

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = -3

Query: 251  FLGHRFPKIRKASAEQVYLVLLQNGNLVAEDKIEKALEIISETCWDGDMDLAKHQRLELF 72
            FLGHR+PKIRKASAEQ+YLVLL+NG+LVAEDKI+KALEIISETCWDGDMD AKHQRL+  
Sbjct: 1154 FLGHRYPKIRKASAEQLYLVLLENGDLVAEDKIDKALEIISETCWDGDMDSAKHQRLKFS 1213

Query: 71   ETVGLEVGPLGKNSDGTPRKTSS 3
            E VGLEVG LG NSDGT RKTSS
Sbjct: 1214 EIVGLEVGSLGNNSDGTSRKTSS 1236


>ref|XP_002511682.1| beta-tubulin cofactor d, putative [Ricinus communis]
            gi|223548862|gb|EEF50351.1| beta-tubulin cofactor d,
            putative [Ricinus communis]
          Length = 1260

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/80 (70%), Positives = 69/80 (86%)
 Frame = -3

Query: 251  FLGHRFPKIRKASAEQVYLVLLQNGNLVAEDKIEKALEIISETCWDGDMDLAKHQRLELF 72
            FL HR+PKIRKASAEQVYLVLLQNGNLV EDKIE+ALEIIS+TCWDGD+++AKH+R+EL+
Sbjct: 1158 FLCHRYPKIRKASAEQVYLVLLQNGNLVPEDKIERALEIISDTCWDGDIEVAKHRRIELY 1217

Query: 71   ETVGLEVGPLGKNSDGTPRK 12
            E  GL++G L ++ D    K
Sbjct: 1218 EIAGLDLGQLPRSRDAVSNK 1237


>ref|XP_002320715.1| tubulin folding cofactor [Populus trichocarpa]
            gi|222861488|gb|EEE99030.1| tubulin folding cofactor
            [Populus trichocarpa]
          Length = 1253

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%)
 Frame = -3

Query: 248  LGHRFPKIRKASAEQVYLVLLQNGNLVAEDKIEKALEIISETCWDGDMDLAKHQRLELFE 69
            LGHR+PKIRKASAEQVY+VLLQNGNLV EDK+EKALEIISETCWDGD++  K Q+LEL+E
Sbjct: 1151 LGHRYPKIRKASAEQVYIVLLQNGNLVPEDKMEKALEIISETCWDGDVEATKLQKLELYE 1210

Query: 68   TVGLEVGPLGKNSDGTPRKTS 6
              G+E+G L K  D  P K S
Sbjct: 1211 MAGVELGLLVKPRDKLPNKDS 1231


>ref|XP_002274584.2| PREDICTED: tubulin-specific chaperone D isoform 1 [Vitis vinifera]
          Length = 1269

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/89 (68%), Positives = 69/89 (77%), Gaps = 6/89 (6%)
 Frame = -3

Query: 251  FLGHRFPKIRKASAEQVYLVLLQNGNLVAEDKIEKALEIISETCWDGDMDLAKHQRLELF 72
            FLGHR+PKIRKASAEQVYLVLLQNG LV EDK+EKALEIISETCW+GD++ AK +RLEL 
Sbjct: 1166 FLGHRYPKIRKASAEQVYLVLLQNGELVTEDKMEKALEIISETCWEGDIEEAKQRRLELH 1225

Query: 71   ETVGLEVGPLGK------NSDGTPRKTSS 3
            +  GLE G L K      N DG  R T+S
Sbjct: 1226 DMAGLETGLLPKIGNGASNRDGEKRPTAS 1254


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