BLASTX nr result

ID: Glycyrrhiza23_contig00012797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012797
         (1409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525727.1| PREDICTED: F-box protein PP2-A12-like [Glyci...   510   e-142
ref|XP_003550877.1| PREDICTED: F-box protein PP2-A12-like [Glyci...   509   e-142
gb|AFK40981.1| unknown [Medicago truncatula]                          502   e-139
ref|XP_003611144.1| F-box family protein [Medicago truncatula] g...   466   e-129
ref|XP_002298062.1| f-box family protein [Populus trichocarpa] g...   442   e-121

>ref|XP_003525727.1| PREDICTED: F-box protein PP2-A12-like [Glycine max]
          Length = 287

 Score =  510 bits (1313), Expect = e-142
 Identities = 240/287 (83%), Positives = 261/287 (90%), Gaps = 6/287 (2%)
 Frame = -3

Query: 1209 MGIRFSIS----SEASKPG--LGEMPESCVAAIMGYLDPPEICKLASLNRTFRGASWADF 1048
            MG+RFS S    SE++ P   LGE+PESCVA IM Y+DPP+ICKLA+LNR FRGAS ADF
Sbjct: 1    MGLRFSSSEAAASESASPSSSLGELPESCVAQIMTYMDPPQICKLATLNRAFRGASSADF 60

Query: 1047 VWESKLPPNYDAVLRKIFDDFPSDLGKRAIYARLCRVNTFDGGTKKVWLDRGMGKLCLSI 868
            VWESKLPPNYD +LR+IF DFPS LGKR IYARLCR+N+ D GTKKVWLDRGMGKLCL +
Sbjct: 61   VWESKLPPNYDILLRRIFADFPSHLGKRGIYARLCRLNSLDDGTKKVWLDRGMGKLCLCV 120

Query: 867  SAKGLAITGIDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVDFPFPAGTYSLFFRLH 688
            SAKGL+ITGIDDRRYWNHIPT+ESRFSSVAYLQQIWWF+VDGEV+FPFPAG YS+FFR+H
Sbjct: 121  SAKGLSITGIDDRRYWNHIPTDESRFSSVAYLQQIWWFQVDGEVEFPFPAGKYSVFFRIH 180

Query: 687  LGRAYKRFGRRVCNTEHVHGWDIKPVQFQLWTSDGQYAATQCFLKGPGKWRYYHAGDFVV 508
            LGRA KRFGRRVCNTEHVHGWD KPV+FQLWTSDGQY A+QCFL GPGKW +YHAGDFVV
Sbjct: 181  LGRAGKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLNGPGKWIFYHAGDFVV 240

Query: 507  EDGNASTKVKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS 367
            EDGNASTKVKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS
Sbjct: 241  EDGNASTKVKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS 287


>ref|XP_003550877.1| PREDICTED: F-box protein PP2-A12-like [Glycine max]
          Length = 286

 Score =  509 bits (1310), Expect = e-142
 Identities = 241/286 (84%), Positives = 258/286 (90%), Gaps = 5/286 (1%)
 Frame = -3

Query: 1209 MGIRFSISSEA---SKPG--LGEMPESCVAAIMGYLDPPEICKLASLNRTFRGASWADFV 1045
            MGIRFS S  A   S P   LGE+PESCVA IM Y+DPP+ICKLA+LNR FRGAS ADFV
Sbjct: 1    MGIRFSSSQAAPSESSPASSLGELPESCVAQIMTYMDPPQICKLATLNRAFRGASSADFV 60

Query: 1044 WESKLPPNYDAVLRKIFDDFPSDLGKRAIYARLCRVNTFDGGTKKVWLDRGMGKLCLSIS 865
            WESKLPPNYD +LR+IF DFPS LGKR IYARLCR+N+ D GTKKVWLDRGMGKLCL +S
Sbjct: 61   WESKLPPNYDVLLRRIFADFPSHLGKRGIYARLCRLNSLDDGTKKVWLDRGMGKLCLCVS 120

Query: 864  AKGLAITGIDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVDFPFPAGTYSLFFRLHL 685
            AKGL+ITGIDDRR WNHIPT+ESRFSSVAYLQQIWWFEVDGEV+FPFPAG YS+FFR+HL
Sbjct: 121  AKGLSITGIDDRRNWNHIPTDESRFSSVAYLQQIWWFEVDGEVEFPFPAGKYSVFFRIHL 180

Query: 684  GRAYKRFGRRVCNTEHVHGWDIKPVQFQLWTSDGQYAATQCFLKGPGKWRYYHAGDFVVE 505
            GRA KRFGRRVCNTEHVHGWD KPV+FQLWTSDGQY A+QCFL GPGKW YYHAGDFVVE
Sbjct: 181  GRAGKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLNGPGKWIYYHAGDFVVE 240

Query: 504  DGNASTKVKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS 367
            DGNASTKVKFSMTQIDCTHTKGGLCLDSVL+YPSEFRKVKAFLNYS
Sbjct: 241  DGNASTKVKFSMTQIDCTHTKGGLCLDSVLIYPSEFRKVKAFLNYS 286


>gb|AFK40981.1| unknown [Medicago truncatula]
          Length = 286

 Score =  502 bits (1292), Expect = e-139
 Identities = 233/286 (81%), Positives = 255/286 (89%), Gaps = 5/286 (1%)
 Frame = -3

Query: 1209 MGIRFSISSEASK---PGLGEMPESCVAAIMGYLDPPEICKLASLNRTFRGASWADFVWE 1039
            MGI FSISS++S    P LGE+PESC+A IM Y+DPP+ICKLASLNR F G S ADFVWE
Sbjct: 1    MGILFSISSQSSSSPNPSLGELPESCIAVIMEYMDPPQICKLASLNRAFHGTSLADFVWE 60

Query: 1038 SKLPPNYDAVLRKIFD--DFPSDLGKRAIYARLCRVNTFDGGTKKVWLDRGMGKLCLSIS 865
            SKLP NY  +++KIFD   FPS LGKR IY+RLC +NTFD GTKKVWLDR MGK+CLS+S
Sbjct: 61   SKLPSNYHVIIQKIFDGSSFPSHLGKRGIYSRLCSLNTFDEGTKKVWLDRSMGKVCLSVS 120

Query: 864  AKGLAITGIDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVDFPFPAGTYSLFFRLHL 685
            AKGL+ITGIDDRRYWNH+PTEESRFSSVAYLQQIWWFEVDGEV+FPFPAGTYSLFFR+HL
Sbjct: 121  AKGLSITGIDDRRYWNHVPTEESRFSSVAYLQQIWWFEVDGEVEFPFPAGTYSLFFRIHL 180

Query: 684  GRAYKRFGRRVCNTEHVHGWDIKPVQFQLWTSDGQYAATQCFLKGPGKWRYYHAGDFVVE 505
            G+  KRFGRRVCNTEHVHGWD+KPV+FQLWTSD QY ++QCFLKGPGKWRYYHAGDFVVE
Sbjct: 181  GKPSKRFGRRVCNTEHVHGWDVKPVRFQLWTSDDQYDSSQCFLKGPGKWRYYHAGDFVVE 240

Query: 504  DGNASTKVKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS 367
            D N STKVKFSMTQIDCTHTKGGLCLDSV VYPSEFRKVK FLNYS
Sbjct: 241  DSNVSTKVKFSMTQIDCTHTKGGLCLDSVFVYPSEFRKVKEFLNYS 286


>ref|XP_003611144.1| F-box family protein [Medicago truncatula]
            gi|355512479|gb|AES94102.1| F-box family protein
            [Medicago truncatula]
          Length = 283

 Score =  466 bits (1200), Expect = e-129
 Identities = 217/283 (76%), Positives = 245/283 (86%), Gaps = 2/283 (0%)
 Frame = -3

Query: 1209 MGIRFS-ISSEASKPGLGEMPESCVAAIMGYLDPPEICKLASLNRTFRGASWADFVWESK 1033
            MGIRFS   S  +   LGE+PESCVA+I+GY+DPP+IC+LA+LNR FR AS ADFVWESK
Sbjct: 1    MGIRFSSFRSNLTGSTLGELPESCVASIIGYMDPPQICQLATLNRAFRAASSADFVWESK 60

Query: 1032 LPPNYDAVLRKIFDDFPSDLGKRAIYARLCRVNTFDGGTKKVWLDRGMGKLCLSISA-KG 856
            LPPNY  +L KIF  FP +LGKR IYA LCR+NT D GTKKVW+DR  GKLCL+ISA KG
Sbjct: 61   LPPNYHLLLAKIFHHFPINLGKRDIYASLCRLNTIDDGTKKVWIDRATGKLCLAISANKG 120

Query: 855  LAITGIDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVDFPFPAGTYSLFFRLHLGRA 676
            L++ G+DDRRYWN+I TEESRF++VAYLQ  WWFEVDGEVDFPFPAGTYSLFFR+HLG+A
Sbjct: 121  LSVLGVDDRRYWNYIITEESRFNTVAYLQHTWWFEVDGEVDFPFPAGTYSLFFRIHLGQA 180

Query: 675  YKRFGRRVCNTEHVHGWDIKPVQFQLWTSDGQYAATQCFLKGPGKWRYYHAGDFVVEDGN 496
            YKRFGRRVCNTEHVHGWD KPV+FQLWTSDGQY A+QCFLKG G W +YHAGDF VEDGN
Sbjct: 181  YKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKGTGNWTFYHAGDFTVEDGN 240

Query: 495  ASTKVKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNYS 367
            +STKVKFSMTQIDCTHTKGGLCLDS  +YPSEF+K K+FLN S
Sbjct: 241  SSTKVKFSMTQIDCTHTKGGLCLDSAFIYPSEFKKSKSFLNCS 283


>ref|XP_002298062.1| f-box family protein [Populus trichocarpa]
            gi|222845320|gb|EEE82867.1| f-box family protein [Populus
            trichocarpa]
          Length = 299

 Score =  442 bits (1136), Expect = e-121
 Identities = 200/262 (76%), Positives = 229/262 (87%), Gaps = 1/262 (0%)
 Frame = -3

Query: 1173 KPGLGEMPESCVAAIMGYLDPPEICKLASLNRTFRGASWADFVWESKLPPNYDAVLRKIF 994
            KPGLG++PESCVA ++ YL+P EIC+LA LNR FRGASWADFVWESKLP NY+ ++ ++F
Sbjct: 33   KPGLGDLPESCVALVLEYLNPSEICRLAKLNRAFRGASWADFVWESKLPVNYEDLIERVF 92

Query: 993  DDFPSD-LGKRAIYARLCRVNTFDGGTKKVWLDRGMGKLCLSISAKGLAITGIDDRRYWN 817
             D   D L KR +Y RLCR NTFD GTKK WLD+  G +CLSI++KGLAITGIDDRRYWN
Sbjct: 93   GDGLEDKLCKREVYTRLCRANTFDDGTKKAWLDKRTGGVCLSIASKGLAITGIDDRRYWN 152

Query: 816  HIPTEESRFSSVAYLQQIWWFEVDGEVDFPFPAGTYSLFFRLHLGRAYKRFGRRVCNTEH 637
            HIPTEES F+SVAYLQQIWWFEVDG+ +FPFPAGTYSLFFRL LGRA KRFGRR+CNTEH
Sbjct: 153  HIPTEESSFNSVAYLQQIWWFEVDGQFEFPFPAGTYSLFFRLQLGRAAKRFGRRICNTEH 212

Query: 636  VHGWDIKPVQFQLWTSDGQYAATQCFLKGPGKWRYYHAGDFVVEDGNASTKVKFSMTQID 457
            VHGWDIKPVQFQLWTSDGQYA++QCFL+ PGKW  YHAGDFVV+  NASTK+KFSMTQID
Sbjct: 213  VHGWDIKPVQFQLWTSDGQYASSQCFLEDPGKWNLYHAGDFVVDGTNASTKLKFSMTQID 272

Query: 456  CTHTKGGLCLDSVLVYPSEFRK 391
            CTHTKGGLCLDS+LVYP + ++
Sbjct: 273  CTHTKGGLCLDSILVYPCKLKE 294


Top