BLASTX nr result

ID: Glycyrrhiza23_contig00012762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012762
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522626.1| PREDICTED: uncharacterized protein LOC100812...   289   6e-76
ref|XP_003526421.1| PREDICTED: uncharacterized protein LOC100800...   287   2e-75
ref|XP_003603435.1| RNA binding protein [Medicago truncatula] gi...   249   4e-64
gb|AFK44933.1| unknown [Medicago truncatula]                          245   1e-62
emb|CBI21002.3| unnamed protein product [Vitis vinifera]              160   3e-37

>ref|XP_003522626.1| PREDICTED: uncharacterized protein LOC100812171 [Glycine max]
          Length = 355

 Score =  289 bits (739), Expect = 6e-76
 Identities = 152/226 (67%), Positives = 175/226 (77%), Gaps = 1/226 (0%)
 Frame = +1

Query: 163 MRIKKGSKVEILANTEKIGEEWRCARIISGNGHTYSVQYDCSSMTSESSVLRVPRKAIRP 342
           MR++KG+KVEI  N + +  EWRCARIISG+GHTYSVQYDCSS TS +S  RV RKAIRP
Sbjct: 1   MRLRKGNKVEIRGNADGLTVEWRCARIISGDGHTYSVQYDCSSTTSGASTERVSRKAIRP 60

Query: 343 CPPPIKGIGSWEVNDIVEVYDVGSWKAAIILKFIGGDFYLVRLWVSCKELKVRKVNMRVR 522
           CPP IKGI S   ND VEVY+ GSW+ A +LK IGGDFYLVRLWVSCKELKVRKVNMR R
Sbjct: 61  CPPLIKGIESQAANDHVEVYNAGSWRVATVLKVIGGDFYLVRLWVSCKELKVRKVNMRPR 120

Query: 523 QSWEDGQWIIKPMGPGDSGVGKSSWHLISNSYEVMPEIQQAKNVCLPG-RASGLHQPQLL 699
           QSW++GQW++ P      G GKSSW LISNSY+  PE  Q +N+  PG  ASGL + +L 
Sbjct: 121 QSWQNGQWVVVP-----KGSGKSSWCLISNSYKDQPE-NQCRNIFSPGLDASGLQESRLA 174

Query: 700 SSSTLKRVSPHGSSPIEDSPRKKRAVVNIGECERFKAVSTAQLLAK 837
           SSSTLKR+SP+ SS IE  PRK RAV N+GECERFKAV+TA LL K
Sbjct: 175 SSSTLKRMSPY-SSVIEAYPRKLRAVENMGECERFKAVTTAPLLQK 219


>ref|XP_003526421.1| PREDICTED: uncharacterized protein LOC100800837 [Glycine max]
          Length = 258

 Score =  287 bits (735), Expect = 2e-75
 Identities = 148/226 (65%), Positives = 172/226 (76%), Gaps = 1/226 (0%)
 Frame = +1

Query: 163 MRIKKGSKVEILANTEKIGEEWRCARIISGNGHTYSVQYDCSSMTSESSVLRVPRKAIRP 342
           MR++KG+KVEI  N + +  EW CARIISG+GHTYSVQYDCSS TSE+S+ RV RKAIRP
Sbjct: 1   MRLRKGNKVEIRGNADGLSVEWCCARIISGDGHTYSVQYDCSSTTSEASIERVSRKAIRP 60

Query: 343 CPPPIKGIGSWEVNDIVEVYDVGSWKAAIILKFIGGDFYLVRLWVSCKELKVRKVNMRVR 522
           CPP IKGI SW  ND VEVY  GSW+AA +LK IGGDFYLVRLWVSCKE  V KVNMR R
Sbjct: 61  CPPLIKGIESWAANDHVEVYIAGSWRAATVLKVIGGDFYLVRLWVSCKEFNVLKVNMRAR 120

Query: 523 QSWEDGQWIIKPMGPGDSGVGKSSWHLISNSYEVMPEIQQAKNVCLPG-RASGLHQPQLL 699
           QSW++GQW++   G G SG   SS +LISNSY+  PE  Q +N+  PG  ASGL + +L 
Sbjct: 121 QSWQNGQWVVMSKGSGMSGDVMSSRYLISNSYKDQPE-NQCRNIFSPGLDASGLQESRLA 179

Query: 700 SSSTLKRVSPHGSSPIEDSPRKKRAVVNIGECERFKAVSTAQLLAK 837
           SSSTLKR+SP+ SS IE  PRK R V N+G CERFKAV+TA LL K
Sbjct: 180 SSSTLKRMSPYDSSVIEAYPRKLRDVENMGVCERFKAVATAPLLQK 225


>ref|XP_003603435.1| RNA binding protein [Medicago truncatula]
           gi|355492483|gb|AES73686.1| RNA binding protein
           [Medicago truncatula]
          Length = 417

 Score =  249 bits (637), Expect = 4e-64
 Identities = 135/226 (59%), Positives = 161/226 (71%), Gaps = 1/226 (0%)
 Frame = +1

Query: 163 MRIKKGSKVEILANTEKIGEEWRCARIISGNGHTYSVQYDCSSMTSESSVLRVPRKAIRP 342
           MR+ KGSKVEIL NT+  G EW CARIISGNGH+Y+V+YD  S+T++    RVPRK IRP
Sbjct: 1   MRLVKGSKVEILVNTQGHGVEWHCARIISGNGHSYNVEYDNPSVTAKPLSNRVPRKFIRP 60

Query: 343 CPPPIKGIGSWEVNDIVEVYDVGSWKAAIILKFIGGDFYLVRLWVSCKELKVRKVNMRVR 522
           CPP I+ IGSWE ND VEV+D G WK A +L  +  +FYLVR+  SC ELKV K+  R+ 
Sbjct: 61  CPPAIENIGSWECNDTVEVWDAGCWKEATVLTDMTEEFYLVRVHGSCMELKVHKILTRIC 120

Query: 523 QSWEDGQWIIKPMGPGDSGVGKSSWHLISNSYEVMPEIQQAKNVCLPG-RASGLHQPQLL 699
           QSW++GQWII P GP  S V K S +LI N+Y+ MPE+QQAKNVC PG  AS LH   L 
Sbjct: 121 QSWQNGQWIISPKGPAKSRVVKFSQNLIPNNYKTMPEVQQAKNVCSPGLDASCLH---LY 177

Query: 700 SSSTLKRVSPHGSSPIEDSPRKKRAVVNIGECERFKAVSTAQLLAK 837
           S STLK V    SS + D PRK+ AVV +GE +RFKAVS A LL K
Sbjct: 178 SPSTLKSV----SSYVGDYPRKRSAVVIMGESKRFKAVSAAPLLEK 219


>gb|AFK44933.1| unknown [Medicago truncatula]
          Length = 417

 Score =  245 bits (625), Expect = 1e-62
 Identities = 133/226 (58%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = +1

Query: 163 MRIKKGSKVEILANTEKIGEEWRCARIISGNGHTYSVQYDCSSMTSESSVLRVPRKAIRP 342
           MR+ KGSKVEIL NT+  G EW CARIISGNGH+Y+V+YD  S+T++    RVPRK IRP
Sbjct: 1   MRLVKGSKVEILVNTQGHGVEWHCARIISGNGHSYNVEYDNPSVTAKPLSNRVPRKFIRP 60

Query: 343 CPPPIKGIGSWEVNDIVEVYDVGSWKAAIILKFIGGDFYLVRLWVSCKELKVRKVNMRVR 522
           CPP I+ IGSWE ND VEV+D G WK A +L  +  +FYLVR+  SC ELKV K+  R+ 
Sbjct: 61  CPPAIENIGSWECNDTVEVWDAGCWKEATVLTDMTEEFYLVRVHGSCMELKVHKILTRIC 120

Query: 523 QSWEDGQWIIKPMGPGDSGVGKSSWHLISNSYEVMPEIQQAKNVCLPG-RASGLHQPQLL 699
           QSW++GQWII P GP  S V K S +LI N+Y+ MPE+QQAKNVC PG  AS LH   L 
Sbjct: 121 QSWQNGQWIISPKGPAKSRVVKFSQNLIPNNYKTMPEVQQAKNVCSPGLDASCLH---LY 177

Query: 700 SSSTLKRVSPHGSSPIEDSPRKKRAVVNIGECERFKAVSTAQLLAK 837
           S S  K V    SS + D PRK+ AVV +GE +RFKAVS A LL K
Sbjct: 178 SPSKWKSV----SSYVGDYPRKRSAVVIMGESKRFKAVSAAPLLEK 219


>emb|CBI21002.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  160 bits (405), Expect = 3e-37
 Identities = 96/221 (43%), Positives = 133/221 (60%), Gaps = 12/221 (5%)
 Frame = +1

Query: 163 MRIKKGSKVEILANTEKIGEEWRCARIISGNGHTYSVQYDCS-SMTSESSVLRVPRKAIR 339
           M+ +KGSKVE+L   E     W CA IISGNGH YSV+YD    MT++++V RV RKAIR
Sbjct: 1   MKFRKGSKVEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANVDRVSRKAIR 60

Query: 340 PCPPPIKGIGSWEVNDIVEVYDVGSWKAAIILKFIGGDFYLVRLWVSCKELKVRKVNMRV 519
           PCP P+KG+ SW   D+VEV++ GSWK A++LK     +YLVRL  SC E +V K N+RV
Sbjct: 61  PCPLPVKGMESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHEFEVHKSNIRV 120

Query: 520 RQSWEDGQWIIKPMGPGDSGVGKSSWHLISNSYEVMP-EIQQA--KNVCLPG-----RAS 675
           RQ+W D +W++   G       + +  L SN ++ M  ++ QA  K     G     + +
Sbjct: 121 RQAWIDDKWVVIGQGSITFEDVRVNKLLTSNCHQKMSFQVPQADMKLKLQAGDDFFQKHA 180

Query: 676 GLHQPQLLSSSTLKRVSPHGSSPIE---DSPRKKRAVVNIG 789
                 ++SS TLKR SP+ SS +E    + +K RA+ N G
Sbjct: 181 DFQDSPMVSSKTLKRASPYCSSGLEAYSGNIQKMRAIENGG 221


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