BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012759
         (1863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   778   0.0  
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   771   0.0  
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   761   0.0  
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   673   0.0  
emb|CBI16283.3| unnamed protein product [Vitis vinifera]              672   0.0  

>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
            max]
          Length = 420

 Score =  778 bits (2009), Expect = 0.0
 Identities = 371/420 (88%), Positives = 392/420 (93%)
 Frame = -3

Query: 1681 MNNIAQRPLNGDIEDDDEDEANGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIQHAQ 1502
            MNN+A+RPLNGD+EDDDED+  GLEAWER Y EDRSWE+LQEDESGLLRPIDTTAI HAQ
Sbjct: 1    MNNVAERPLNGDVEDDDEDDGGGLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQ 60

Query: 1501 YXXXXXXXXXXXXXXRIQKGLIRYLYIVVDLSKAAADTDFRPSRMAVIGKQVEAFIREFF 1322
            Y              RIQKGLIRYLYIVVDLSKAA++ DFRPSRMAV+GKQVEAFIREFF
Sbjct: 61   YRRRLRTLAATAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMAVMGKQVEAFIREFF 120

Query: 1321 DQNPLSHVGLVTIKDGTAHCLTDLGGSPESHIKALMGKLECSGDASLQNALELVLENLKQ 1142
            DQNPLSHVGLVTIKDG AHC+T+LGGSPESHIKALMGKLECSGDASLQNALELVL  L Q
Sbjct: 121  DQNPLSHVGLVTIKDGIAHCITELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQ 180

Query: 1141 IPSYGHREVLILYSALSTCDPGDLMKTIQECKKSKIRCSVIGLAAEMFICKHLCQETGGT 962
            IPSYGHREVLILYSALSTCDPGDLM+TIQ+CKKSKIRCSVIGLAAEMF+CKHLCQETGGT
Sbjct: 181  IPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGT 240

Query: 961  YSVALDESHFKELILEHAPPPPAIAEYATSNLIKMGFPQRAAEGSVAICTCHEEAKTGGG 782
            YSVALDESHFKELILEHAPPPPAIAEYAT+NLIKMGFPQR+AEGSVAICTCHEEAKTGGG
Sbjct: 241  YSVALDESHFKELILEHAPPPPAIAEYATANLIKMGFPQRSAEGSVAICTCHEEAKTGGG 300

Query: 781  YTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSSQNDPSHNFPN 602
            YTCPRCKVRVCELPTECR+CGLTLISSPHLARSYHHLFPIV FDEV+PSSQND +H+FPN
Sbjct: 301  YTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPN 360

Query: 601  TCFGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSKSVTAAQ 422
            TCFGCQQSLLSQGNKPGLSV CPKCKQQFCLDCDIY+HESLHNCPGCES RHSKSVTA+Q
Sbjct: 361  TCFGCQQSLLSQGNKPGLSVICPKCKQQFCLDCDIYVHESLHNCPGCESSRHSKSVTASQ 420


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355499974|gb|AES81177.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 426

 Score =  771 bits (1992), Expect = 0.0
 Identities = 377/426 (88%), Positives = 392/426 (92%), Gaps = 6/426 (1%)
 Frame = -3

Query: 1681 MNNIAQRPLNGDIEDDDEDEAN--GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIQH 1508
            MNNIA +PLNGD+EDDDEDEAN  GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAI H
Sbjct: 1    MNNIAGKPLNGDLEDDDEDEANDDGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHH 60

Query: 1507 AQYXXXXXXXXXXXXXXRIQKGLIRYLYIVVDLSKAAADTDFRPSRMAVIGKQVEAFIRE 1328
            AQY              RIQKGLIRYLYIVVDLSKAA++ DFRPSRMAVI KQVE FIRE
Sbjct: 61   AQYRRRLRALASNAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIRE 120

Query: 1327 FFDQNPLSHVGLVTIKDGTAHCLTDLGGSPESHIKALMGKLECSGDASLQNALELVLENL 1148
            FFDQNPLSHVGLVT KDG A+CLTDLGGSPESHIKALMGKLECSGDASLQNALELV  NL
Sbjct: 121  FFDQNPLSHVGLVTTKDGVANCLTDLGGSPESHIKALMGKLECSGDASLQNALELVHSNL 180

Query: 1147 KQIPSYGHREVLILYSALSTCDPGDLMKTIQECKKSKIRCSVIGLAAEMFICKHLCQETG 968
             QIPSYGHREVLILYSALSTCDPGDLM+TIQ+CKKSKIRCSVIGLAAEMFICKHLCQETG
Sbjct: 181  NQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETG 240

Query: 967  GTYSVALDESHFKELILEHAPPPPAIAEYATSNLIKMGFPQRAAEGSVAICTCHEEAKTG 788
            GTYSVALDESHFKELILEH+PPPPAIAEYAT+NLIKMGFPQRAAEGSVAICTCHEEAKTG
Sbjct: 241  GTYSVALDESHFKELILEHSPPPPAIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTG 300

Query: 787  GGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSSQNDPSHNF 608
            GGYTCPRCKVRVCELPTECR+CGLTLISSPHLARSYHHLFPIVPF E+SPSSQNDP+H+F
Sbjct: 301  GGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVPFAEISPSSQNDPNHSF 360

Query: 607  PNTCFGCQQSLLSQ----GNKPGLSVTCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSK 440
            PNTCFGCQQSLLSQ    GNK  LSV+CPKCKQQFCLDCD+YIHESLHNCPGCESFRHSK
Sbjct: 361  PNTCFGCQQSLLSQGFGAGNKAELSVSCPKCKQQFCLDCDMYIHESLHNCPGCESFRHSK 420

Query: 439  SVTAAQ 422
            SVT AQ
Sbjct: 421  SVTIAQ 426


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
            max]
          Length = 419

 Score =  761 bits (1964), Expect = 0.0
 Identities = 365/420 (86%), Positives = 387/420 (92%)
 Frame = -3

Query: 1681 MNNIAQRPLNGDIEDDDEDEANGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIQHAQ 1502
            MNN+A+RPLN D+EDDDED+  GLEAWER Y EDRSWE+LQEDESGLLRPIDTTAI HAQ
Sbjct: 1    MNNVAERPLNKDVEDDDEDDGGGLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQ 60

Query: 1501 YXXXXXXXXXXXXXXRIQKGLIRYLYIVVDLSKAAADTDFRPSRMAVIGKQVEAFIREFF 1322
            Y              RIQKGLIRYLYIVVDLSKAA++ DFRPSRM V+GKQVEAFIREFF
Sbjct: 61   YRRRLRTLAATAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMVVMGKQVEAFIREFF 120

Query: 1321 DQNPLSHVGLVTIKDGTAHCLTDLGGSPESHIKALMGKLECSGDASLQNALELVLENLKQ 1142
            DQNPLSHVGLVTIKDG AHC+T+LGGSPESHIKALMGKLECSGDASLQNALELVL  L Q
Sbjct: 121  DQNPLSHVGLVTIKDGIAHCITELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQ 180

Query: 1141 IPSYGHREVLILYSALSTCDPGDLMKTIQECKKSKIRCSVIGLAAEMFICKHLCQETGGT 962
            IPSYGHREVLILYSALSTCDPGDLM+TIQ+CKKSKIRCSVIGLAAEMF+CKHLC+ETGGT
Sbjct: 181  IPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCEETGGT 240

Query: 961  YSVALDESHFKELILEHAPPPPAIAEYATSNLIKMGFPQRAAEGSVAICTCHEEAKTGGG 782
            YSVALDESHFKELILEHAPPPPAIAEY+T+NLIKMGFPQR+AEGSVAICTCHEEAKTGGG
Sbjct: 241  YSVALDESHFKELILEHAPPPPAIAEYSTANLIKMGFPQRSAEGSVAICTCHEEAKTGGG 300

Query: 781  YTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSSQNDPSHNFPN 602
            YTCPRCKVRVCELPTECR+CGLTLISSPHLARSYHHLFPIV FDEV+P SQ D S +FPN
Sbjct: 301  YTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVMFDEVTP-SQKDSSRSFPN 359

Query: 601  TCFGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSKSVTAAQ 422
            TCFGCQQSLLSQGNKPGLSV CPKCKQQFCLDCDIY+HESLHNCPGCES RHSKSVTA+Q
Sbjct: 360  TCFGCQQSLLSQGNKPGLSVICPKCKQQFCLDCDIYVHESLHNCPGCESSRHSKSVTASQ 419


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
            sativus]
          Length = 423

 Score =  673 bits (1736), Expect = 0.0
 Identities = 319/421 (75%), Positives = 355/421 (84%), Gaps = 3/421 (0%)
 Frame = -3

Query: 1681 MNNIAQRPLNGDI-EDDDEDEANGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIQHA 1505
            MNN   R LNG+  E+DD+D+ANGL AWER Y +DRSWE+LQEDESGLLRPID  AI HA
Sbjct: 1    MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHA 60

Query: 1504 QYXXXXXXXXXXXXXXRIQKGLIRYLYIVVDLSKAAADTDFRPSRMAVIGKQVEAFIREF 1325
            QY              RIQKGLIRYLYIV+D SKAA + DFRPSRMAV+ K V+AF+REF
Sbjct: 61   QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREF 120

Query: 1324 FDQNPLSHVGLVTIKDGTAHCLTDLGGSPESHIKALMGKLECSGDASLQNALELVLENLK 1145
            FDQNPLS +GLVTIKDG A+CLTDLGGSPESH+KALMGKLECSGDASLQN LELV   L 
Sbjct: 121  FDQNPLSQIGLVTIKDGFANCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN 180

Query: 1144 QIPSYGHREVLILYSALSTCDPGDLMKTIQECKKSKIRCSVIGLAAEMFICKHLCQETGG 965
            QIPSYGHREVL+LYSAL++CDPGD+M+T+Q+CK SKIRCSVIGL AE+FIC+HLCQETGG
Sbjct: 181  QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG 240

Query: 964  TYSVALDESHFKELILEHAPPPPAIAEYATSNLIKMGFPQRAAEGSVAICTCHEEAKTGG 785
            +YSVALDESHFKEL+LEHAPPPPAIA+ A  NLIKMGFPQRAAE S+AIC+CH+EAK GG
Sbjct: 241  SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG 300

Query: 784  GYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSSQNDPSHNFP 605
            GYTCPRCK RVCELPTECRICGLTLISSPHLARSYHHLFPI+PFDEVS    +DP H  P
Sbjct: 301  GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP 360

Query: 604  NTCFGCQQSLL--SQGNKPGLSVTCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSKSVT 431
              CFGCQ+SL+  S GN P + V+CPKCKQ FCLDCDIYIHESLHNCPGCESFR  K  T
Sbjct: 361  KVCFGCQESLMNPSTGNSPSIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPKLAT 420

Query: 430  A 428
            +
Sbjct: 421  S 421


>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  672 bits (1733), Expect = 0.0
 Identities = 320/418 (76%), Positives = 357/418 (85%), Gaps = 4/418 (0%)
 Frame = -3

Query: 1663 RPLNGDIEDDDEDE----ANGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIQHAQYX 1496
            R L+G+ E+++EDE      GL+AWERAY ++RSWESLQEDESGLLRPID   I HAQY 
Sbjct: 76   RRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYR 135

Query: 1495 XXXXXXXXXXXXXRIQKGLIRYLYIVVDLSKAAADTDFRPSRMAVIGKQVEAFIREFFDQ 1316
                         RIQKGLIRYLYIVVDLS+AA++ DF+PSRMAV+ K +EAFIREFFDQ
Sbjct: 136  RRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQ 195

Query: 1315 NPLSHVGLVTIKDGTAHCLTDLGGSPESHIKALMGKLECSGDASLQNALELVLENLKQIP 1136
            NPLS +GLVTIKDG A CLTDLGGSP+SH+KALMGKLECSGD+SLQNAL+LV   L QIP
Sbjct: 196  NPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIP 255

Query: 1135 SYGHREVLILYSALSTCDPGDLMKTIQECKKSKIRCSVIGLAAEMFICKHLCQETGGTYS 956
            SYGHREVLILYSALSTCDPGD+M+TIQECKKSKIRCSVIGL+AE+FIC+HLCQETGG+YS
Sbjct: 256  SYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYS 315

Query: 955  VALDESHFKELILEHAPPPPAIAEYATSNLIKMGFPQRAAEGSVAICTCHEEAKTGGGYT 776
            VALDESHFKEL+LEHAPPPPAIAE+A +NLIKMGFPQRAAEG ++IC+CH+EAK GGGYT
Sbjct: 316  VALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYT 375

Query: 775  CPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSSQNDPSHNFPNTC 596
            CPRCK RVCELPTECRICGLTL+SSPHLARSYHHLFPI PFDEVS S  N+P       C
Sbjct: 376  CPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRAC 435

Query: 595  FGCQQSLLSQGNKPGLSVTCPKCKQQFCLDCDIYIHESLHNCPGCESFRHSKSVTAAQ 422
            FGCQ+SLL  GNKP L V CPKCKQ FCLDCDIYIHESLHNCPGCESFRHSK V+  +
Sbjct: 436  FGCQESLLIPGNKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTE 493