BLASTX nr result

ID: Glycyrrhiza23_contig00012754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012754
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554852.1| PREDICTED: U-box domain-containing protein 4...    74   3e-11
ref|XP_003543493.1| PREDICTED: U-box domain-containing protein 4...    67   3e-09
ref|XP_003618340.1| U-box domain-containing protein [Medicago tr...    62   2e-07

>ref|XP_003554852.1| PREDICTED: U-box domain-containing protein 40-like [Glycine max]
          Length = 549

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = +3

Query: 531 MEIQQSVKLTIHXXXXXXXXXXXXQ--PIITNTTTPRLKWKKIISFIPSNSKPNNNKTQS 704
           MEIQQS+KLTIH            +  PI T  TTP+LKWKKI  F  + +K    +TQ+
Sbjct: 1   MEIQQSLKLTIHKKWPSSPKKPPKETEPITTTPTTPKLKWKKI--FFQTKTK---TQTQT 55

Query: 705 PPEEFLCPISGSLMSDPV 758
           PPEEFLCPIS SLM DPV
Sbjct: 56  PPEEFLCPISHSLMFDPV 73


>ref|XP_003543493.1| PREDICTED: U-box domain-containing protein 40-like [Glycine max]
          Length = 557

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = +3

Query: 531 MEIQQSVKLTIHXXXXXXXXXXXXQ--PIITNTTTPRLKWKKIISFIPSNSKPNNNKTQS 704
           MEIQQS+KLTIH            +  PI     TP+LKWKKI  F  + +K    + Q+
Sbjct: 1   MEIQQSLKLTIHKKWPSSPKKPPKESEPITPTPNTPKLKWKKI--FFQTKTK---TQIQT 55

Query: 705 PPEEFLCPISGSLMSDPV 758
           PPEEFLCPIS SLM DPV
Sbjct: 56  PPEEFLCPISRSLMFDPV 73


>ref|XP_003618340.1| U-box domain-containing protein [Medicago truncatula]
           gi|355493355|gb|AES74558.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 554

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = +3

Query: 621 TTTPRLKWKKIISFIPSNSKPNNNKTQSPPEEFLCPISGSLMSDPV 758
           TTTP++KWKK++ F  +     N   Q+PP+EFLCPISGSLMSDPV
Sbjct: 26  TTTPKMKWKKMMIFFNTTKATQN---QNPPQEFLCPISGSLMSDPV 68


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