BLASTX nr result

ID: Glycyrrhiza23_contig00012745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012745
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloro...   156   6e-36
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   152   1e-34
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...   152   1e-34
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...   148   2e-33
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32

>ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 656

 Score =  156 bits (395), Expect = 6e-36
 Identities = 92/155 (59%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
 Frame = -3

Query: 733 NRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNNNNXXXXXXXXXXXXXXXXXXXXXAIF 554
           +RPSTSCDRHPQENFTGFCPSCLCERLAVLDPN+++                      IF
Sbjct: 24  HRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNSSSTSSAARKPPTSSTAAAALKA--IF 81

Query: 553 RSSSSTAPRGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCDVRGRSTLY 374
           R S +      NRPP S   SFLPELRRTKSFSASKNE  +  FEPQRKSCDVRGRSTL+
Sbjct: 82  RPSIAA----RNRPPPS---SFLPELRRTKSFSASKNEALSGFFEPQRKSCDVRGRSTLF 134

Query: 373 SLFSQDDERKIPKPEPPRVSDVETR-NLPSSSIVQ 272
           SLF+Q         E     +VETR NLPSSS+VQ
Sbjct: 135 SLFNQ---------EAAVAVEVETRHNLPSSSVVQ 160


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  152 bits (384), Expect = 1e-34
 Identities = 82/145 (56%), Positives = 99/145 (68%), Gaps = 4/145 (2%)
 Frame = -3

Query: 733 NRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNNNNXXXXXXXXXXXXXXXXXXXXXAIF 554
           +RPSTSCDRHP+E FTGFCPSCLCERLAVL+P+ ++                     AIF
Sbjct: 16  HRPSTSCDRHPEERFTGFCPSCLCERLAVLEPSTSSSSSTSSRKPPINSSAAAAALKAIF 75

Query: 553 RSSSSTAP----RGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCDVRGR 386
           R S++ A      G N+P     +SFLPELRRTKSFSASKNE ++  FEPQRKSCDVR R
Sbjct: 76  RPSATGAGPGGLSGRNKP-----SSFLPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVR 130

Query: 385 STLYSLFSQDDERKIPKPEPPRVSD 311
           +TL++LF+QDDER   K E PRVS+
Sbjct: 131 NTLWTLFTQDDERNPLKNEAPRVSN 155


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score =  152 bits (384), Expect = 1e-34
 Identities = 82/145 (56%), Positives = 99/145 (68%), Gaps = 4/145 (2%)
 Frame = -3

Query: 733 NRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNNNNXXXXXXXXXXXXXXXXXXXXXAIF 554
           +RPSTSCDRHP+E FTGFCPSCLCERLAVL+P+ ++                     AIF
Sbjct: 16  HRPSTSCDRHPEERFTGFCPSCLCERLAVLEPSTSSSSSTSSRKPPINSSAAAAALKAIF 75

Query: 553 RSSSSTAP----RGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCDVRGR 386
           R S++ A      G N+P     +SFLPELRRTKSFSASKNE ++  FEPQRKSCDVR R
Sbjct: 76  RPSATGAGPGGLSGRNKP-----SSFLPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVR 130

Query: 385 STLYSLFSQDDERKIPKPEPPRVSD 311
           +TL++LF+QDDER   K E PRVS+
Sbjct: 131 NTLWTLFTQDDERNPLKNEAPRVSN 155


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score =  148 bits (373), Expect = 2e-33
 Identities = 84/159 (52%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
 Frame = -3

Query: 733 NRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNNNNXXXXXXXXXXXXXXXXXXXXXAIF 554
           +RPSTSCDRHP+E+FTGFCPSCLCERLAVL+P+++                      AIF
Sbjct: 21  HRPSTSCDRHPEEHFTGFCPSCLCERLAVLEPSSSTASSSRKPPPIPTTTTATAALKAIF 80

Query: 553 RSSSSTAPRGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCDVRGRSTLY 374
           + SSS  P            SF PELRRTKSFSASKNE ++  FEPQRKSCDVR RSTL+
Sbjct: 81  KPSSSDRP------------SFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRSTLW 128

Query: 373 SLFSQDDERKIPKPEP----PRVSDVETRNLPSSSIVQG 269
           SLF QDDE++ P  +     P + +VE+R   SSS V+G
Sbjct: 129 SLFYQDDEQRNPSKKDSLKGPEIIEVESR--ISSSSVRG 165


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  144 bits (364), Expect = 2e-32
 Identities = 79/150 (52%), Positives = 95/150 (63%), Gaps = 5/150 (3%)
 Frame = -3

Query: 733 NRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNNNNXXXXXXXXXXXXXXXXXXXXXAIF 554
           +RPSTSCDRHP+E+FTGFCPSCLCERLAVLDPN ++                      IF
Sbjct: 14  HRPSTSCDRHPEEHFTGFCPSCLCERLAVLDPNTSSAASSSSSRKPTATAALKA----IF 69

Query: 553 RSSSSTAPRGNNRPPTSTSTSFLPELRRTKSFSASKNEVYTNAFEPQRKSCDVRGRSTLY 374
           +    ++   NN    S+ +SF PELRRTKSFSASKNE ++  FEPQRKSCDVR R+TL+
Sbjct: 70  KPPQPSSSNNNNN---SSKSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRNTLW 126

Query: 373 SLFSQDDER-----KIPKPEPPRVSDVETR 299
           SLF+QD ER     K P    P +  VE R
Sbjct: 127 SLFNQDSERNPSVKKEPFKGGPEIEAVEPR 156


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