BLASTX nr result

ID: Glycyrrhiza23_contig00012697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012697
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [G...   259   1e-66
ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [G...   257   5e-66
ref|XP_003629302.1| Major cold-shock protein [Medicago truncatul...   194   5e-47
ref|XP_004146143.1| PREDICTED: cold shock protein 1-like [Cucumi...   171   3e-40
ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vit...   147   4e-33

>ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
          Length = 250

 Score =  259 bits (662), Expect = 1e-66
 Identities = 146/270 (54%), Positives = 149/270 (55%), Gaps = 1/270 (0%)
 Frame = +3

Query: 135 MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 314
           MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD
Sbjct: 1   MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 60

Query: 315 NDKTKAVDVTGPDGAPLQPRKDSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYHCGD 494
           NDKTKAVDVTG DGAPLQPR  +                               CY CGD
Sbjct: 61  NDKTKAVDVTGVDGAPLQPRASA----------ANNRAGGSGFGARRNGGSGAACYQCGD 110

Query: 495 FGHLARDCNRSNN-XXXXXXXXXXXXXXXXXXHLARDCXXXXXXXXXXXXXXXXXXXXXX 671
           FGHLARDCNRS+N                   HLARDC                      
Sbjct: 111 FGHLARDCNRSSNTGGGGGGSGGGCFNCGGFGHLARDC------VRGGGGNVGVGGGGGS 164

Query: 672 XXXXXXXXXXHMARDCATSKVXXXXXXXXXXCFRCGEVGHMARDCXXXXXXXXXXXXXXX 851
                     HMARDCAT K           CFRCGEVGH+ARDC               
Sbjct: 165 GSCFRCGGFGHMARDCATGKGNIGGGSSGGGCFRCGEVGHLARDC----GMEGGRYGDGG 220

Query: 852 XXXXXXXXKSTCFNCGKPGHFARECVEASG 941
                   KSTCFNCGKPGHFARECVEASG
Sbjct: 221 NSGGGGGGKSTCFNCGKPGHFARECVEASG 250


>ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
          Length = 252

 Score =  257 bits (656), Expect = 5e-66
 Identities = 145/270 (53%), Positives = 149/270 (55%), Gaps = 1/270 (0%)
 Frame = +3

Query: 135 MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 314
           MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD
Sbjct: 1   MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 60

Query: 315 NDKTKAVDVTGPDGAPLQPRKDSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYHCGD 494
           NDKTKAVDVTG DGAPLQPR  +                               CY CG+
Sbjct: 61  NDKTKAVDVTGVDGAPLQPRAAA-------GNNNRAAGSGFGFGARRNGGGGAACYQCGE 113

Query: 495 FGHLARDCNR-SNNXXXXXXXXXXXXXXXXXXHLARDCXXXXXXXXXXXXXXXXXXXXXX 671
           FGHLARDCNR SN+                  HLARDC                      
Sbjct: 114 FGHLARDCNRSSNSGGGGGGSGGGCFNCGGFGHLARDC------VRGGGGSVGIGGGGGG 167

Query: 672 XXXXXXXXXXHMARDCATSKVXXXXXXXXXXCFRCGEVGHMARDCXXXXXXXXXXXXXXX 851
                     HMARDCAT K           CFRCGEVGH+ARDC               
Sbjct: 168 GSCFRCGGFGHMARDCATGKGNIGGGGSGGGCFRCGEVGHLARDC-----GMEGGRFGGG 222

Query: 852 XXXXXXXXKSTCFNCGKPGHFARECVEASG 941
                   KSTCFNCGKPGHFARECVEASG
Sbjct: 223 GGSGGGGGKSTCFNCGKPGHFARECVEASG 252


>ref|XP_003629302.1| Major cold-shock protein [Medicago truncatula]
           gi|355523324|gb|AET03778.1| Major cold-shock protein
           [Medicago truncatula]
          Length = 329

 Score =  194 bits (492), Expect = 5e-47
 Identities = 119/291 (40%), Positives = 133/291 (45%), Gaps = 23/291 (7%)
 Frame = +3

Query: 135 MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 314
           MAEER +GVVQWFNN KGFGFIKPDD  EDLFVHQS IRS+G+R+L EGDRVEF IA GD
Sbjct: 1   MAEERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGD 60

Query: 315 NDKTKAVDVTGPDGAPLQPRKDSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYHCGD 494
           N KTKAVDVTGP G PLQ R+D+                               CY CGD
Sbjct: 61  NGKTKAVDVTGPKGEPLQVRQDN----------HGGGGGGRGFRGGERRNGGGGCYTCGD 110

Query: 495 FGHLARDCNRS--------NNXXXXXXXXXXXXXXXXXXHLARDCXXXXXXXXXXXXXXX 650
            GH+ARDC+RS        +                   H ARDC               
Sbjct: 111 TGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDC----MRGGGNNNNGG 166

Query: 651 XXXXXXXXXXXXXXXXXHMARDCATSKVXXXXXXXXXXCFRCGEVGHMARDC-------- 806
                            H+ARDCAT             C++CGEVGH+ARDC        
Sbjct: 167 GGYGGGGTSCYRCGGVGHIARDCATPS---SGGGGGGACYKCGEVGHIARDCSNEGGRFD 223

Query: 807 -------XXXXXXXXXXXXXXXXXXXXXXXKSTCFNCGKPGHFARECVEAS 938
                                         K TCFNCGK GHFAR+CVEAS
Sbjct: 224 GGNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEAS 274


>ref|XP_004146143.1| PREDICTED: cold shock protein 1-like [Cucumis sativus]
          Length = 273

 Score =  171 bits (434), Expect = 3e-40
 Identities = 108/280 (38%), Positives = 124/280 (44%), Gaps = 12/280 (4%)
 Frame = +3

Query: 135 MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 314
           MAEER TGVVQWFN+ KGFGFIKPD  G DLFVHQSSI+SDGYR+L+ GD VEF IA GD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 315 NDKTKAVDVTGPDGAPLQPRKDSF---------XXXXXXXXXXXXXXXXXXXXXXXXXXX 467
           + K+KA++V   DG+    R+D+F                                    
Sbjct: 61  DGKSKAIEVVALDGSS-GNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAG 119

Query: 468 XXXCYHCGDFGHLARDCNRSNNXXXXXXXXXXXXXXXXXXHLARDCXXXXXXXXXXXXXX 647
              CY CG+ GHLARDC R +N                  HLARDC              
Sbjct: 120 GGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDC------PRGNSGGG 173

Query: 648 XXXXXXXXXXXXXXXXXXHMARDCATSKV--XXXXXXXXXXCFRCGEVGHMARDCXXXXX 821
                             H+ARDC                 CF CGE GH+ARDC     
Sbjct: 174 GGGGGGGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESR 233

Query: 822 XXXXXXXXXXXXXXXXXXKS-TCFNCGKPGHFARECVEAS 938
                              S TCFNCGK GHFAREC +AS
Sbjct: 234 GSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS 273


>ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
          Length = 241

 Score =  147 bits (372), Expect = 4e-33
 Identities = 94/276 (34%), Positives = 119/276 (43%), Gaps = 12/276 (4%)
 Frame = +3

Query: 135 MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 314
           MA+ER TGVV+WF++ KGFGFI P++GGEDLFVHQSSI+SDG+R+L EG+ VEF I  G+
Sbjct: 1   MAQERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGE 60

Query: 315 NDKTKAVDVTGPDGAPLQ-PRKDSF-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 476
           + +TKAVDVTGPDG+ +Q  ++D++                                   
Sbjct: 61  DGRTKAVDVTGPDGSSVQGSKRDNYGGGGGGGGRGGRSGGGYGSGWRTGDRGGNGGGGAA 120

Query: 477 CYHCGDFGHLARDCNRSNN-----XXXXXXXXXXXXXXXXXXHLARDCXXXXXXXXXXXX 641
           CY+CG  GHLARDC R NN                       HLARDC            
Sbjct: 121 CYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSR---------- 170

Query: 642 XXXXXXXXXXXXXXXXXXXXHMARDCATSKVXXXXXXXXXXCFRCGEVGHMARDC-XXXX 818
                                                    C+ CG+ GH+ARDC     
Sbjct: 171 -------------------------------PSGGGGGGGGCYNCGDYGHLARDCTLESG 199

Query: 819 XXXXXXXXXXXXXXXXXXXKSTCFNCGKPGHFAREC 926
                                 C+NCG+ GHFAREC
Sbjct: 200 SAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFAREC 235


Top