BLASTX nr result

ID: Glycyrrhiza23_contig00012695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012695
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621725.1| F-box protein [Medicago truncatula] gi|35549...   100   1e-19
ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|35549...    96   2e-18
gb|AFK40721.1| unknown [Lotus japonicus]                               87   1e-15
gb|ABD32486.1| Cyclin-like F-box [Medicago truncatula]                 82   5e-14
ref|XP_003618573.1| F-box family-3 [Medicago truncatula] gi|3554...    82   5e-14

>ref|XP_003621725.1| F-box protein [Medicago truncatula] gi|355496740|gb|AES77943.1|
           F-box protein [Medicago truncatula]
          Length = 409

 Score =  100 bits (249), Expect = 1e-19
 Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 16/165 (9%)
 Frame = +2

Query: 14  KVENLCLVLPTTISL--PSSVLTSTNLVILKLRGLNV-YHTLSSVDLPPLKTLHLREVHF 184
           +V++L +    T+ L  P  VL ST LV+LKL  L + Y   SS +LP LK LHL +VHF
Sbjct: 148 QVQHLDVTSSATLCLCVPYKVLNSTALVVLKLNALTIDYVHRSSTNLPSLKILHLTQVHF 207

Query: 185 VGQAYLVEILSACPTLEILLMKFLRF-DNVLSGGDFIHL---PKLVKVDISRSNI---FL 343
           +   +L++ILS  P LE LL+K L+  DN L+  D   L   PKL++ D+S S+I    L
Sbjct: 208 LKLKFLIKILSMSPLLEDLLLKDLQVTDNTLAHDDAAALKPFPKLLRADVSESSISAFLL 267

Query: 344 PLEALCNVELLRADVMVPT-----GSHTFLNLTYLELRFF-GYHW 460
           PL+   NV+ LR+ V++ T      +  FLNLT+++L F  GY+W
Sbjct: 268 PLKLFYNVQFLRSQVLLQTLEQDFSTTQFLNLTHMDLIFHDGYYW 312


>ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|355496732|gb|AES77935.1|
           F-box protein [Medicago truncatula]
          Length = 431

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 71/162 (43%), Positives = 96/162 (59%), Gaps = 13/162 (8%)
 Frame = +2

Query: 14  KVENLCLVLPTTISL--PSSVLTSTNLVILKLRGLNV-YHTLSSVDLPPLKTLHLREVHF 184
           KV++L +    T+ L  P  VLTST LV+LKL  L + Y   SS +LP LK LHL +VHF
Sbjct: 148 KVQHLDVTSSATLCLCVPYKVLTSTALVVLKLNALTIDYVHRSSTNLPSLKILHLTQVHF 207

Query: 185 VGQAYLVEILSACPTLEILLMKFLRF-DNVLSGGDFIHL---PKLVKVDISRSNI---FL 343
           +   +L++ILS  P LE LL+K L+  DN L+  D   L   PKL++ DIS S I    L
Sbjct: 208 LKLKFLIKILSMSPLLEDLLLKDLQVTDNTLAQDDAAALKPFPKLLRADISDSCISPLLL 267

Query: 344 PLEALCNVELLRADV--MVPTGSHTFLNLTYLELRF-FGYHW 460
           PL+   NV  LR+ +  +       FL+LT+L+L F  GY+W
Sbjct: 268 PLKLFYNVHFLRSQLQTLEEQQDTQFLSLTHLDLSFDHGYYW 309


>gb|AFK40721.1| unknown [Lotus japonicus]
          Length = 394

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
 Frame = +2

Query: 8   KRKVENL----------CLVLPTTISLPSSVLTSTNLVILKLRGLNVYHTLSSVDLPPLK 157
           KR+VE++           L LP  +    S+ + T LV+LKL GL +    SSVDLP LK
Sbjct: 110 KRRVEHIDISLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLK 169

Query: 158 TLHLREVHFVGQAYLVEILSACPTLEILLMKFLRFDNVLSGGDFIHLPKLVKVDISRS-- 331
            LHL+++    +  L EILS C  LE L  + + FD   +  +FI LPKLV+ DIS S  
Sbjct: 170 VLHLQDLLLQDEGCLAEILSGCLALEDLKARDVFFDGNKADAEFITLPKLVRADISESGG 229

Query: 332 NIFLPLEALCNVELLRADV----MVPTGSHTFLNLTYLELRFFGYHWGW 466
           +    ++ + NV  LR       ++  G   F NLT+LEL +  ++  W
Sbjct: 230 SQHFMMKVVNNVSFLRIHEIDYNLIYMGEDMFHNLTHLELVYTTFNRDW 278


>gb|ABD32486.1| Cyclin-like F-box [Medicago truncatula]
          Length = 392

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 70/185 (37%), Positives = 90/185 (48%), Gaps = 44/185 (23%)
 Frame = +2

Query: 44  TTISLPSSVLTSTNLVILKLRGLNVYHTLSSV-----DLPPLKTLHLREVHFVGQAYLVE 208
           T I LP+++L ST LV+L L G  V  T+  V     +LP L+ LH+ +VHF+   YL++
Sbjct: 120 TPIYLPNNILCST-LVVLNLNGNGVL-TIDCVYESYTNLPNLEKLHMTKVHFLKLKYLIQ 177

Query: 209 ILSACPTLEILLMKFLRFDNVLSGGDFIHL--------------PKLVKVDISRS---NI 337
           ILS CP LE LL+K     NV +  D   L              PKL+K  IS S   + 
Sbjct: 178 ILSVCPLLEDLLIK-----NVTTNDDNDTLDALTKQRDKLLKPFPKLLKAHISDSSSISS 232

Query: 338 FLPLEALCNVELLRADVMVPT-----------------GSHTFLNLTYLELRFFG----- 451
           FLPL+   NVE LRA V V T                  +  F NLT++EL F       
Sbjct: 233 FLPLKLFYNVEFLRAQVAVQTPLKLFDYVAPVQTSEQQDTTQFFNLTHMELSFEKEDEEY 292

Query: 452 YHWGW 466
           YHW W
Sbjct: 293 YHWDW 297


>ref|XP_003618573.1| F-box family-3 [Medicago truncatula] gi|355493588|gb|AES74791.1|
           F-box family-3 [Medicago truncatula]
          Length = 408

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 70/185 (37%), Positives = 90/185 (48%), Gaps = 44/185 (23%)
 Frame = +2

Query: 44  TTISLPSSVLTSTNLVILKLRGLNVYHTLSSV-----DLPPLKTLHLREVHFVGQAYLVE 208
           T I LP+++L ST LV+L L G  V  T+  V     +LP L+ LH+ +VHF+   YL++
Sbjct: 139 TPIYLPNNILCST-LVVLNLNGNGVL-TIDCVYESYTNLPNLEKLHMTKVHFLKLKYLIQ 196

Query: 209 ILSACPTLEILLMKFLRFDNVLSGGDFIHL--------------PKLVKVDISRS---NI 337
           ILS CP LE LL+K     NV +  D   L              PKL+K  IS S   + 
Sbjct: 197 ILSVCPLLEDLLIK-----NVTTNDDNDTLDALTKQRDKLLKPFPKLLKAHISDSSSISS 251

Query: 338 FLPLEALCNVELLRADVMVPT-----------------GSHTFLNLTYLELRFFG----- 451
           FLPL+   NVE LRA V V T                  +  F NLT++EL F       
Sbjct: 252 FLPLKLFYNVEFLRAQVAVQTPLKLFDYVAPVQTSEQQDTTQFFNLTHMELSFEKEDEEY 311

Query: 452 YHWGW 466
           YHW W
Sbjct: 312 YHWDW 316


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