BLASTX nr result

ID: Glycyrrhiza23_contig00012687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012687
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49645.1| nuclear transcription factor Y subunit A3 [Medica...   348   2e-93
gb|AFK41890.1| unknown [Medicago truncatula]                          338   2e-90
ref|XP_003533780.1| PREDICTED: nuclear transcription factor Y su...   335   1e-89
ref|XP_003546473.1| PREDICTED: nuclear transcription factor Y su...   334   3e-89
gb|ACU24533.1| unknown [Glycine max]                                  334   3e-89

>gb|AFK49645.1| nuclear transcription factor Y subunit A3 [Medicago truncatula]
          Length = 235

 Score =  348 bits (893), Expect = 2e-93
 Identities = 191/243 (78%), Positives = 201/243 (82%), Gaps = 3/243 (1%)
 Frame = +1

Query: 253 MKPFLFLNHPDTEFNCSQVDRDHSMA--HAPYPYGGDQIFAGSLVSYGPQAVNQPQMLPQ 426
           MKPFL LNHPDTEFNCSQVD + SMA  HA YPY  D IFAGSLV+Y P AVNQPQMLPQ
Sbjct: 1   MKPFLSLNHPDTEFNCSQVDHNQSMAQTHAHYPYS-DPIFAGSLVAYAPHAVNQPQMLPQ 59

Query: 427 MLGLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRH 606
           M+GLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIK+RKPYLHESRH
Sbjct: 60  MMGLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRH 119

Query: 607 RHALNRVRGSGGRFLSTKQLSQSNAEFVTGSHSGSGPVNKYQKEDPLEARS-HSSKTGDN 783
           +HALNRVRGSGGRFLSTKQLS+SNAEFVTGSHSG G  N YQKED  E  S HSSKT DN
Sbjct: 120 KHALNRVRGSGGRFLSTKQLSESNAEFVTGSHSGPG--NNYQKEDTSEMESHHSSKTRDN 177

Query: 784 VSSSISTCSDRTCLSGNSVSFRQAAEHMFLGNTANMXXXXXXXXXXXXLAFGGTNQRCAS 963
           + SSI++CSDRTC SGNS SFRQ  EHMFLGN+ NM            L FGGT QR AS
Sbjct: 178 I-SSITSCSDRTCFSGNSFSFRQ-PEHMFLGNSPNM--GGGAPQCSGGLTFGGTKQR-AS 232

Query: 964 VVR 972
           VVR
Sbjct: 233 VVR 235


>gb|AFK41890.1| unknown [Medicago truncatula]
          Length = 233

 Score =  338 bits (866), Expect = 2e-90
 Identities = 178/216 (82%), Positives = 188/216 (87%), Gaps = 3/216 (1%)
 Frame = +1

Query: 253 MKPFLFLNHPDTEFNCSQVDRDHSMA--HAPYPYGGDQIFAGSLVSYGPQAVNQPQMLPQ 426
           MKPFL LNHPDTEFNCSQVD + SMA  HA YPY  D IFAGSLV+Y P AVNQPQMLPQ
Sbjct: 1   MKPFLSLNHPDTEFNCSQVDHNQSMAQTHAHYPYS-DPIFAGSLVAYAPHAVNQPQMLPQ 59

Query: 427 MLGLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRH 606
           M+GLASTRVALPLDLAQDGPIYVN KQYHGILRRRQSRAKLEAQNKLIK+RKPYLHESRH
Sbjct: 60  MMGLASTRVALPLDLAQDGPIYVNVKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRH 119

Query: 607 RHALNRVRGSGGRFLSTKQLSQSNAEFVTGSHSGSGPVNKYQKEDPLEARS-HSSKTGDN 783
           +HALNRVRGSGGRFLSTKQLS+SNAEFVTGSHSG G  N YQKED  E  S HSSKT DN
Sbjct: 120 KHALNRVRGSGGRFLSTKQLSESNAEFVTGSHSGPG--NNYQKEDTSEMESHHSSKTRDN 177

Query: 784 VSSSISTCSDRTCLSGNSVSFRQAAEHMFLGNTANM 891
           + SSI++CSDRTC SGNS SFRQ  EHMFLGN+ NM
Sbjct: 178 I-SSITSCSDRTCFSGNSFSFRQ-PEHMFLGNSPNM 211


>ref|XP_003533780.1| PREDICTED: nuclear transcription factor Y subunit A-3-like [Glycine
           max]
          Length = 228

 Score =  335 bits (860), Expect = 1e-89
 Identities = 181/240 (75%), Positives = 196/240 (81%)
 Frame = +1

Query: 253 MKPFLFLNHPDTEFNCSQVDRDHSMAHAPYPYGGDQIFAGSLVSYGPQAVNQPQMLPQML 432
           MKPFLFLN P+TEFN SQVD +HSMAH+ YPYG D IFA     YGPQA++ PQM+P ML
Sbjct: 1   MKPFLFLNLPNTEFNSSQVDCNHSMAHSSYPYG-DPIFA-----YGPQAISHPQMIPPML 54

Query: 433 GLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRH 612
           GLASTRVALPLDLA+DGPIYVNAKQYHGILRRRQSRAKLEAQNKLIK+RKPYLHESRHRH
Sbjct: 55  GLASTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRHRH 114

Query: 613 ALNRVRGSGGRFLSTKQLSQSNAEFVTGSHSGSGPVNKYQKEDPLEARSHSSKTGDNVSS 792
           ALNRVRGSGGRFLSTKQL+QSNAEFVTG+HSGS P N+YQKE   E  SHSSK GDN SS
Sbjct: 115 ALNRVRGSGGRFLSTKQLAQSNAEFVTGAHSGSDPTNRYQKEHLSEVESHSSKDGDN-SS 173

Query: 793 SISTCSDRTCLSGNSVSFRQAAEHMFLGNTANMXXXXXXXXXXXXLAFGGTNQRCASVVR 972
            I+TCSDR CLSGN+V+FRQ  E MFLGN+ANM            L FGG  QR  SVVR
Sbjct: 174 FITTCSDRPCLSGNNVNFRQ-QECMFLGNSANM---GGSPQFSGGLTFGGAKQR-TSVVR 228


>ref|XP_003546473.1| PREDICTED: nuclear transcription factor Y subunit A-3-like [Glycine
           max]
          Length = 228

 Score =  334 bits (857), Expect = 3e-89
 Identities = 178/240 (74%), Positives = 195/240 (81%)
 Frame = +1

Query: 253 MKPFLFLNHPDTEFNCSQVDRDHSMAHAPYPYGGDQIFAGSLVSYGPQAVNQPQMLPQML 432
           MK FLFLN PDTE NCSQVD +HSMAH+ YPYG        +++YGPQA++ PQM+PQML
Sbjct: 1   MKQFLFLNLPDTEINCSQVDCNHSMAHSSYPYGDP------ILAYGPQAISHPQMVPQML 54

Query: 433 GLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRH 612
           GLASTRVALPLDLA+DGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRH
Sbjct: 55  GLASTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRH 114

Query: 613 ALNRVRGSGGRFLSTKQLSQSNAEFVTGSHSGSGPVNKYQKEDPLEARSHSSKTGDNVSS 792
           ALNRVRGSGGRFLSTKQL+QSNAEFVTG+HSGS P N YQKE PLE  SHSSK GDN +S
Sbjct: 115 ALNRVRGSGGRFLSTKQLAQSNAEFVTGAHSGSDPTNIYQKEHPLEVESHSSKDGDN-AS 173

Query: 793 SISTCSDRTCLSGNSVSFRQAAEHMFLGNTANMXXXXXXXXXXXXLAFGGTNQRCASVVR 972
            I+T SDR CLSGN+++FRQ  E MFLGN+ANM            L FGG  QR  SVVR
Sbjct: 174 FITTYSDRPCLSGNNLNFRQ-QECMFLGNSANM---SGAPQCSGGLTFGGAKQR-TSVVR 228


>gb|ACU24533.1| unknown [Glycine max]
          Length = 228

 Score =  334 bits (857), Expect = 3e-89
 Identities = 181/240 (75%), Positives = 195/240 (81%)
 Frame = +1

Query: 253 MKPFLFLNHPDTEFNCSQVDRDHSMAHAPYPYGGDQIFAGSLVSYGPQAVNQPQMLPQML 432
           MKPFLFLN P+TEFN SQVD +HSMAH+ YPYG D IFA     YGPQA++ PQM+P ML
Sbjct: 1   MKPFLFLNLPNTEFNSSQVDCNHSMAHSSYPYG-DPIFA-----YGPQAISHPQMIPPML 54

Query: 433 GLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRH 612
           GLASTRVALPLDLA+DGPIYVNAKQYHGILRRRQSRAKLEAQNKLIK+RKPYLHESRHRH
Sbjct: 55  GLASTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRHRH 114

Query: 613 ALNRVRGSGGRFLSTKQLSQSNAEFVTGSHSGSGPVNKYQKEDPLEARSHSSKTGDNVSS 792
           ALNRVRGSGGRFLSTKQL+QSNAEFVTG HSGS P N+YQKE   E  SHSSK GDN SS
Sbjct: 115 ALNRVRGSGGRFLSTKQLAQSNAEFVTGVHSGSDPTNRYQKEHLSEVESHSSKDGDN-SS 173

Query: 793 SISTCSDRTCLSGNSVSFRQAAEHMFLGNTANMXXXXXXXXXXXXLAFGGTNQRCASVVR 972
            I+TCSDR CLSGN+V+FRQ  E MFLGN+ANM            L FGG  QR  SVVR
Sbjct: 174 FITTCSDRPCLSGNNVNFRQ-QECMFLGNSANM---GGSPQFSGGLTFGGAKQR-TSVVR 228


Top