BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012685
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    50   5e-11
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6...    47   2e-08
ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Gl...    54   3e-08
ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein A...    54   3e-08
gb|EEC68446.1| hypothetical protein OsI_36656 [Oryza sativa Indi...    45   1e-07

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 50.4 bits (119), Expect(2) = 5e-11
 Identities = 30/107 (28%), Positives = 50/107 (46%)
 Frame = -1

Query: 384  LS*HTICEGRKMNVSGTCPICQQSSETLEHALLYCQWTRPVWFGLQLGVRSEYSHDTNIA 205
            L+ +T    R MN+ G CP C +  ET EH +  C  +   W+   L + +      +  
Sbjct: 1075 LAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFR 1134

Query: 204  QWLETQMEDIYNLPCPKAQKEFALTSLSTTLWGIWKSRNEAIFERKK 64
             W+E+ ++        K  + +AL  +    W IW  RN+ +FE+KK
Sbjct: 1135 IWVESLLD------THKDTEWWALFWM--ICWNIWLGRNKWVFEKKK 1173



 Score = 41.6 bits (96), Expect(2) = 5e-11
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -2

Query: 476  PLNTLVPT*RTWQGIWKVQVPRKIRVFLWKICHNILSV 363
            P  +  P  + WQ IWK ++P K+++F WK  HN L+V
Sbjct: 1040 PSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAV 1077


>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
           gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
           III subunit RPC6 [Medicago truncatula]
          Length = 456

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
 Frame = -1

Query: 372 TICEGRKMNV--SGTCPICQQSSETLEHALLYCQWTRPVWFGLQLGVRSEYSHDTNIAQW 199
           T C  R+  V     CP+C  + E+  H  + C  T  VWF   LG +     D N   W
Sbjct: 286 TRCNLRRRGVVLDTVCPLCFDADESSNHRFMACPMTLQVWFASPLGFQPPPQTDLN--AW 343

Query: 198 LETQMEDIYNLPCPKAQKEFALTSLSTTLWGIWKSRNEAIFER 70
           L         L    A++  A+      LW IW  RN+ IF +
Sbjct: 344 L---------LSWLSAKEPLAVQLFCVCLWKIWFFRNQVIFNQ 377



 Score = 36.6 bits (83), Expect(2) = 2e-08
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -2

Query: 479 MPLNTLVPT*RTWQGIWKVQVPRKIRVFLWKICHNILSVK 360
           +P  +L+   + W+ IWK+ +P ++R F+WK+  NI+  +
Sbjct: 248 LPGPSLLHWDKLWKLIWKLPLPTRVRNFMWKLARNIIPTR 287


>ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1248

 Score = 53.5 bits (127), Expect(2) = 3e-08
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -1

Query: 357  RKMNVSGTCPICQQSSETLEHALLYCQWTRPVWFG 253
            RK+  S  CPIC    ET+EHA L+C WTRP+WFG
Sbjct: 1129 RKLVNSPLCPICGTEPETVEHAFLFCPWTRPLWFG 1163



 Score = 29.3 bits (64), Expect(2) = 3e-08
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 449  RTWQGIWKVQVPRKIRVFLWKICHNILSVKE 357
            R W  I  +  P  ++V +W IC N L   E
Sbjct: 1094 RLWLEICSIVAPADVKVLMWSICQNALPTFE 1124


>ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 475

 Score = 53.9 bits (128), Expect(2) = 3e-08
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = -1

Query: 333 CPICQQSSETLEHALLYCQWTRPVWFGLQLGVRSEYSHDT---NIAQWLETQMEDIYNLP 163
           C +C Q+ ET+ H L+ C ++R VW+ +   +RS  +  T   + A W +  +       
Sbjct: 376 CSLCDQTMETMNHLLVDCPFSRSVWYEVLSWIRSTGAPPTTGVSFADWWQASVHS----- 430

Query: 162 CPKAQKEFALTSLSTTLWGIWKSRNEAIFE 73
            P   ++   + +  T W IWK RN A+F+
Sbjct: 431 APSVARKGTSSIIMLTAWWIWKHRNAAVFD 460



 Score = 28.9 bits (63), Expect(2) = 3e-08
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 446 TWQGIWKVQVPRKIRVFLWKICHNILSVKEER 351
           TW+  WK   P +++ FLW  C +     E R
Sbjct: 334 TWKLNWKSWAPPRVKFFLWLACQDRCWTAERR 365


>gb|EEC68446.1| hypothetical protein OsI_36656 [Oryza sativa Indica Group]
          Length = 314

 Score = 45.1 bits (105), Expect(2) = 1e-07
 Identities = 31/91 (34%), Positives = 43/91 (47%)
 Frame = -1

Query: 357 RKMNVSGTCPICQQSSETLEHALLYCQWTRPVWFGLQLGVRSEYSHDTNIAQWLETQMED 178
           R + +  TC IC    E + HAL +CQ  R +W  +        SHD N A W  T    
Sbjct: 89  RNLELLSTCCICGAEEEDVAHALCHCQQARNLWSAMYSA--RAISHDVNSA-WSGTDW-- 143

Query: 177 IYNLPCPKAQKEFALTSLSTTLWGIWKSRNE 85
           I NL     ++E A+  +   +W IW +RNE
Sbjct: 144 ILNLLEVLPKEEDAMFLM--LMWRIWHNRNE 172



 Score = 35.8 bits (81), Expect(2) = 1e-07
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 449 RTWQGIWKVQVPRKIRVFLWKICHNILSVKEER 351
           ++W+ IW   VP+K+R+F WK   N L   + +
Sbjct: 54  KSWKRIWACNVPQKVRIFAWKAISNSLPTMKNK 86