BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012669
         (1716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   691   0.0  
ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   684   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   665   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   662   0.0  
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   660   0.0  

>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 1015

 Score =  691 bits (1784), Expect = 0.0
 Identities = 338/366 (92%), Positives = 352/366 (96%)
 Frame = +2

Query: 2    SLEGRETFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALRSSSPETFIS 181
            S EGR  FTENHF+DIFDSADKPL+GRRWWL AEDPLQCLA CITLTEALRSSSPETFIS
Sbjct: 650  SHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFIS 709

Query: 182  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRKDAQKDP 361
            HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV +IM++DAQKDP
Sbjct: 710  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVSNIMQRDAQKDP 769

Query: 362  AIFPDARHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDAISDDSELFGA 541
            AIFPDA HARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER+AISDD+ELFGA
Sbjct: 770  AIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDTELFGA 829

Query: 542  SCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 721
            SCYAAKVTLTALEEMFQGAR IMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLG+H
Sbjct: 830  SCYAAKVTLTALEEMFQGARGIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGKH 889

Query: 722  IIKTSLQMLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLSFAGVHDS 901
            IIKTSLQML+LQRETDKVMV RQRTAFPPNFVHSLDGSHMMMTAVACK  GL+FAGVHDS
Sbjct: 890  IIKTSLQMLTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLNFAGVHDS 949

Query: 902  YWTHACDVDNMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFDLREVLE 1081
            YWTHACDVD MNRILREKFVELYETP+LENLLESF+ SFP+LSFP LP+RGDFDLREVLE
Sbjct: 950  YWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSLPERGDFDLREVLE 1009

Query: 1082 SPYFFN 1099
            SPYFFN
Sbjct: 1010 SPYFFN 1015


>ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 992

 Score =  684 bits (1765), Expect = 0.0
 Identities = 334/366 (91%), Positives = 349/366 (95%)
 Frame = +2

Query: 2    SLEGRETFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALRSSSPETFIS 181
            S EGR  FTENHF+DIFDSADKPLEGRRWWL AEDPLQCLA CITLTEALRSSSPETFIS
Sbjct: 627  SYEGRLAFTENHFEDIFDSADKPLEGRRWWLKAEDPLQCLAVCITLTEALRSSSPETFIS 686

Query: 182  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRKDAQKDP 361
            HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLV GEKPADVYSGIAARV +IM++DAQKDP
Sbjct: 687  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVTGEKPADVYSGIAARVSNIMQRDAQKDP 746

Query: 362  AIFPDARHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDAISDDSELFGA 541
            A+F DA HARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKER+AISDD ELFGA
Sbjct: 747  AVFRDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERNAISDDKELFGA 806

Query: 542  SCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 721
            SCYAAKVTLTALEEMFQGAR IM+WLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLG+H
Sbjct: 807  SCYAAKVTLTALEEMFQGARGIMSWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGKH 866

Query: 722  IIKTSLQMLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLSFAGVHDS 901
            IIKTSLQ+L+LQRETDKVMV RQRTAFPPNFVHSLDGSHMMMTAVACK  GLSFAGVHDS
Sbjct: 867  IIKTSLQILTLQRETDKVMVTRQRTAFPPNFVHSLDGSHMMMTAVACKKEGLSFAGVHDS 926

Query: 902  YWTHACDVDNMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFDLREVLE 1081
            YWTHACDVD MNRILREKFVELYETP+LENLLESF+ SFP+LSFP LP+RGDFDL+EVLE
Sbjct: 927  YWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFPSLPERGDFDLKEVLE 986

Query: 1082 SPYFFN 1099
            SPYFFN
Sbjct: 987  SPYFFN 992


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  665 bits (1716), Expect = 0.0
 Identities = 320/366 (87%), Positives = 347/366 (94%)
 Frame = +2

Query: 2    SLEGRETFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALRSSSPETFIS 181
            S EGR TFTENH DDIFDSAD+PLEG+RWWLNAEDP Q LAACI L+EALRSSSPET IS
Sbjct: 670  SHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTIS 729

Query: 182  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRKDAQKDP 361
            HIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIAARVLDIM++DA+KDP
Sbjct: 730  HIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDP 789

Query: 362  AIFPDARHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDAISDDSELFGA 541
            AIFPDA  AR L+NQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER+AI+DD ELFGA
Sbjct: 790  AIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGA 849

Query: 542  SCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 721
            +CYAAK+TLTAL EMFQ ARSIM+WLGDCAK+IASENQPVRWTTPLGLPVVQPYRKLGRH
Sbjct: 850  ACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRH 909

Query: 722  IIKTSLQMLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLSFAGVHDS 901
            +IKTSLQ+L+LQRET+ +MVKRQRTAFPPNFVHSLDGSHMMMTA+ACK AGL+FAGVHDS
Sbjct: 910  LIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDS 969

Query: 902  YWTHACDVDNMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFDLREVLE 1081
            YWTHACDVD MNR+LREKFV+LYETPILENLLESF++SFP L FPPLP+RGDFDLREVLE
Sbjct: 970  YWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLE 1029

Query: 1082 SPYFFN 1099
            SPYFFN
Sbjct: 1030 SPYFFN 1035


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  662 bits (1709), Expect = 0.0
 Identities = 319/366 (87%), Positives = 346/366 (94%)
 Frame = +2

Query: 2    SLEGRETFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALRSSSPETFIS 181
            SLEGR  FTENH DDIFDSADKPLEGRRWWLNAEDP QCLA CI L+EA+RSSSPET IS
Sbjct: 656  SLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSIS 715

Query: 182  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRKDAQKDP 361
            HIPVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIAARVLDIM++DAQ+DP
Sbjct: 716  HIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDP 775

Query: 362  AIFPDARHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDAISDDSELFGA 541
            A FPDA  AR LVNQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER AI+DDSELFGA
Sbjct: 776  AEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGA 835

Query: 542  SCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 721
            +CYAAKVTLTAL EMF+ ARSIM WLG+CAK+IASEN+PVRWTTPLGLPVVQPYRK+GRH
Sbjct: 836  ACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRH 895

Query: 722  IIKTSLQMLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLSFAGVHDS 901
            +IKTSLQ+L+LQ+ET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+ AGL+FAGVHDS
Sbjct: 896  LIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDS 955

Query: 902  YWTHACDVDNMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFDLREVLE 1081
            YWTHACDVD +NRILREKFVELYETPILE LLESF+ S+PTL FPPLP+RGDFDLR+VLE
Sbjct: 956  YWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLE 1015

Query: 1082 SPYFFN 1099
            SPYFFN
Sbjct: 1016 SPYFFN 1021


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  660 bits (1704), Expect = 0.0
 Identities = 317/366 (86%), Positives = 345/366 (94%)
 Frame = +2

Query: 2    SLEGRETFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALRSSSPETFIS 181
            SLEGR  FTENH DDIFDS+DKPLEGRRWWLNAEDP QCLA CI L+EA+RSSSPET +S
Sbjct: 655  SLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVS 714

Query: 182  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRKDAQKDP 361
            HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM++DAQ+DP
Sbjct: 715  HIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDP 774

Query: 362  AIFPDARHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDAISDDSELFGA 541
            A FPDA  AR LVNQVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER AI+DDSELFGA
Sbjct: 775  AEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGA 834

Query: 542  SCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGRH 721
            +CYAAKVTLTAL EMF+ ARSIM WLG+CAK+IASEN+PVRWTTPLGLPVVQPYRK+GRH
Sbjct: 835  ACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRH 894

Query: 722  IIKTSLQMLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKNAGLSFAGVHDS 901
            +IKTSLQ+L+LQRET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+ AGL+FAGVHDS
Sbjct: 895  LIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDS 954

Query: 902  YWTHACDVDNMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFDLREVLE 1081
            YWTHACDVD +NRILREKFVELYE PILE LLESF+ S+PTL FPPLP+RGDFD+R+VLE
Sbjct: 955  YWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLE 1014

Query: 1082 SPYFFN 1099
            SPYFFN
Sbjct: 1015 SPYFFN 1020