BLASTX nr result

ID: Glycyrrhiza23_contig00012645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012645
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycin...   348   9e-94
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin...   347   2e-93
ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   302   7e-80
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi...   289   7e-76
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75

>ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
          Length = 394

 Score =  348 bits (893), Expect = 9e-94
 Identities = 180/262 (68%), Positives = 201/262 (76%), Gaps = 24/262 (9%)
 Frame = -3

Query: 866 TTTSQENGDVVSTATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAI 687
           TTTSQ+NGD  +T TK+YVGGIPYYSTEDDIRSYFE CGTITEVDCMTFPE+GKFRGIAI
Sbjct: 135 TTTSQDNGDAPNTNTKIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAI 194

Query: 686 ISFKTEXXXXXXXXXXXXDMGGLFLKIQPYKAPTQPFKAEARFAPEMMEGYNRIYVGNLS 507
           I+FKTE            DMGGLFLKIQPYKA T+  KA + FAPE++EGYNRIYVGNLS
Sbjct: 195 ITFKTEAAAKRALALDGADMGGLFLKIQPYKA-TRANKA-SDFAPEILEGYNRIYVGNLS 252

Query: 506 WDITEDEVRKFFSKCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRP 327
           WDITE+E+RKFF+   ITS++FGMDKETGEFRGYAHVDFGDSQSLK AL LDQ+VLFGRP
Sbjct: 253 WDITEEELRKFFNNSEITSLRFGMDKETGEFRGYAHVDFGDSQSLKKALALDQNVLFGRP 312

Query: 326 VRISCAVPLKKKPGEQPS------------------------EQPSPTVSGKMKRRICYE 219
           VRISCAVPLKKK G   S                        ++ S T SGKM+RR CYE
Sbjct: 313 VRISCAVPLKKKTGTHASSTVNEANGDKSSSTGSDKINGADGDKSSSTGSGKMRRRTCYE 372

Query: 218 CREKGHTLSACPNKKTVASTTT 153
           C EKGHT +ACP K+TVA+TTT
Sbjct: 373 CGEKGHTFAACPTKQTVAATTT 394


>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
           gi|255644669|gb|ACU22837.1| unknown [Glycine max]
          Length = 411

 Score =  347 bits (891), Expect = 2e-93
 Identities = 182/262 (69%), Positives = 204/262 (77%), Gaps = 24/262 (9%)
 Frame = -3

Query: 866 TTTSQENGDVVSTATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAI 687
           TTTS++NGD   T TK YVGGIPYYSTEDDIRSYFE CGTITEVDCMTFPE+GKFRGIAI
Sbjct: 153 TTTSKDNGDA-PTNTKAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAI 211

Query: 686 ISFKTEXXXXXXXXXXXXDMGGLFLKIQPYKAPTQPFKAEARFAPEMMEGYNRIYVGNLS 507
           I+FKTE            DMGGLFLKIQPYKA T+  KA + FAPE++EGYNRIYVGNLS
Sbjct: 212 ITFKTEAAAKRALALDGADMGGLFLKIQPYKA-TRANKA-SDFAPEILEGYNRIYVGNLS 269

Query: 506 WDITEDEVRKFFSKCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRP 327
           WDITE+E+RKFF+ C ITS++FGMDKETGEFRGYAHVDF DSQSLKTAL LDQ+VLFGRP
Sbjct: 270 WDITEEELRKFFNGCEITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALDQNVLFGRP 329

Query: 326 VRISCAVPLKKKP------------GEQPS------------EQPSPTVSGKMKRRICYE 219
           VRISCAVPLKKK             G++PS            ++PS T SGKM+RR CYE
Sbjct: 330 VRISCAVPLKKKTGTHTSSTVNGANGDKPSSTGSDRIDGADGDKPSSTGSGKMRRRTCYE 389

Query: 218 CREKGHTLSACPNKKTVASTTT 153
           C EKGHT +ACP K+TVA+TTT
Sbjct: 390 CGEKGHTFAACPKKQTVAATTT 411


>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  302 bits (773), Expect = 7e-80
 Identities = 157/240 (65%), Positives = 174/240 (72%), Gaps = 12/240 (5%)
 Frame = -3

Query: 857 SQENGDVVSTATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAIISF 678
           SQENGD    + KVYVGGIPYYSTEDDIRSYF+ CGTITEVDCM FPESGKFRGIAIISF
Sbjct: 174 SQENGDA---SNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRGIAIISF 230

Query: 677 KTEXXXXXXXXXXXXDMGGLFLKIQPYKAPTQPFKAEARFAPEMMEGYNRIYVGNLSWDI 498
           KTE            DMGGLFLKIQPYK  T      + FAPEM+EGYNRIYVGNL WDI
Sbjct: 231 KTEAAAKRALALDGADMGGLFLKIQPYK--TTRANKSSDFAPEMVEGYNRIYVGNLPWDI 288

Query: 497 TEDEVRKFFSKCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRPVRI 318
           TEDEVRKFFS+CN++SI+FGMDKET EFRGYAHVDF D+ SL  AL LDQ ++ GRP +I
Sbjct: 289 TEDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMALKLDQEIVCGRPAKI 348

Query: 317 SCAVPLKKKPGEQPSEQPSPTV------------SGKMKRRICYECREKGHTLSACPNKK 174
            CAVP   K G +    P+P+             SGKMKRR CYEC E+GH  SACP K+
Sbjct: 349 RCAVP---KKGAKDYSTPAPSSEKAENDGGLTSGSGKMKRRTCYECGERGHISSACPKKQ 405


>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
           gi|223528378|gb|EEF30417.1| Protein gar2, putative
           [Ricinus communis]
          Length = 436

 Score =  289 bits (739), Expect = 7e-76
 Identities = 145/237 (61%), Positives = 174/237 (73%), Gaps = 12/237 (5%)
 Frame = -3

Query: 830 TATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAIISFKTEXXXXXX 651
           +ATKVYVGGIPYYSTE+DIRSYFEGCGTITEVDCMTFP+SGKFRGIAII FKTE      
Sbjct: 179 SATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFKTEAAAKRA 238

Query: 650 XXXXXXDMGGLFLKIQPYKAPTQPFKAE--ARFAPEMMEGYNRIYVGNLSWDITEDEVRK 477
                 DMGG FLKIQPYK  T+ F+A+  + FAP+++EGYNRIYVGNLSWDITE+++RK
Sbjct: 239 LALDGSDMGGFFLKIQPYKT-TRTFQAKKVSDFAPKIVEGYNRIYVGNLSWDITEEDLRK 297

Query: 476 FFSKCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRPVRISCAVPLK 297
           FFS C I+S+++G DKETGEFRGY HV+F D+ SL  AL LDQ ++ GR ++ISCAVP+K
Sbjct: 298 FFSGCKISSVRWGTDKETGEFRGYGHVEFSDNLSLLMALKLDQQIVCGRAIKISCAVPMK 357

Query: 296 ----------KKPGEQPSEQPSPTVSGKMKRRICYECREKGHTLSACPNKKTVASTT 156
                        G +       TVSGKM+RR CYEC +KGH  +ACP     A+ T
Sbjct: 358 GAKVHATAAPTATGNEADNGELSTVSGKMRRRTCYECHQKGHVSTACPKVLASAAAT 414


>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  286 bits (733), Expect = 3e-75
 Identities = 150/248 (60%), Positives = 171/248 (68%), Gaps = 25/248 (10%)
 Frame = -3

Query: 827 ATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAIISFKTEXXXXXXX 648
           A +VYVGGIPYYSTEDDIRS+FEGCGTITEVDCMTFP+SGKFRGIAIISFKTE       
Sbjct: 194 ADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAKRAL 253

Query: 647 XXXXXDMGGLFLKIQPYKAPTQPFKAEARFAPEMMEGYNRIYVGNLSWDITEDEVRKFFS 468
                DMGG +LKIQPYK  T     E  FAP ++EGYNRIYVGNLSWDITED+++KFFS
Sbjct: 254 DLDGSDMGGFYLKIQPYK--TTKVNKEPNFAPGIVEGYNRIYVGNLSWDITEDDLKKFFS 311

Query: 467 KCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRPVRISCAVPLKKKP 288
            C I+SI+FGMDKETGEFRGY HVDF D+ SL  AL LDQ ++ GRP++ISCAVP  KK 
Sbjct: 312 DCKISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIVCGRPIKISCAVP--KKG 369

Query: 287 GEQPSEQPS------------------------PTV-SGKMKRRICYECREKGHTLSACP 183
           G+    Q                          P++ SGK+KRR CYEC EKGH  +ACP
Sbjct: 370 GKLQENQNQIVEEAKIQSTAMPMITSDEVNNGVPSISSGKIKRRTCYECGEKGHISTACP 429

Query: 182 NKKTVAST 159
            K T   T
Sbjct: 430 KKLTADPT 437


Top