BLASTX nr result
ID: Glycyrrhiza23_contig00012641
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00012641
(1107 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610579.1| Pentatricopeptide repeat-containing protein ... 536 e-150
ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containi... 514 e-143
ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containi... 506 e-141
ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containi... 486 e-135
emb|CBI25753.3| unnamed protein product [Vitis vinifera] 486 e-135
>ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 706
Score = 536 bits (1382), Expect = e-150
Identities = 271/361 (75%), Positives = 300/361 (83%), Gaps = 8/361 (2%)
Frame = +2
Query: 47 MAYHLCSSPSSLFHDLFISSSSRKFKVRNFASSFQPPSP--------LTPHSKTFLHANH 202
M+YHLCSS S LFHD ++ SSRKFK+RNF SSF PS LTPHSKT LH
Sbjct: 1 MSYHLCSSSSPLFHDP-LTISSRKFKLRNFPSSFHTPSSSSSSSSSSLTPHSKTLLH--- 56
Query: 203 VSLQEPIPQQLAQGVISEVHANSEDPLGXXXXXXXXXXXYIWVNPKSRRAKQLGKKSYDA 382
+SLQE IPQQ Q S+ A ++P+G YIWVNPKS RAKQLGKKSYDA
Sbjct: 57 ISLQESIPQQQPQDANSQKDAKFDNPIGNSTSSKSS---YIWVNPKSPRAKQLGKKSYDA 113
Query: 383 RYTSLVNIAHSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQR 562
RY+SLV ++++LDSC PTEHDVS++LK LGDKV+EQDAVI+INNM NSV P VL+Y QR
Sbjct: 114 RYSSLVKLSNALDSCEPTEHDVSQILKCLGDKVIEQDAVIIINNMENSVVVPFVLQYVQR 173
Query: 563 KITPTREVILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPN 742
K PTREVILYNVTLKVFRKCKDLDGAEK+F EML+RGVKPDNVTFSTIISCARSCYLP+
Sbjct: 174 KSIPTREVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCARSCYLPD 233
Query: 743 KAVEWFEKMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLI 922
KAVEWFEKMP +GCEPDDVTYSVMID+YGKAG+IDMALNLYDRARTEKWRI+ TFSTLI
Sbjct: 234 KAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLI 293
Query: 923 KMYGLAGNYDGCLNVYEEMKAVGVKPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFS 1102
KMYG+AGNYDGCLNVYEEMKA+GVKPNLVVYNTLLDAMGRAKRPWQA+TIYKEM NN
Sbjct: 294 KMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDIL 353
Query: 1103 P 1105
P
Sbjct: 354 P 354
Score = 72.8 bits (177), Expect = 1e-10
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Frame = +2
Query: 581 EVILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVEWF 760
E ++ +K++ + DG +++EM GVKP+ V ++T++ P +A +
Sbjct: 285 EPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIY 344
Query: 761 EKMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLA 940
++M + P+ TY+ ++ AYG+A + AL +Y R ++ ++T +++L+ M
Sbjct: 345 KEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADV 404
Query: 941 GNYDGCLNVYEEMKAVGV-KPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
G D ++E+MK+ P+ +++L+ + R +A+ + EM +GF P
Sbjct: 405 GYTDLAFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNEMIESGFEP 460
>ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 514 bits (1324), Expect = e-143
Identities = 263/356 (73%), Positives = 288/356 (80%), Gaps = 3/356 (0%)
Frame = +2
Query: 47 MAYHLCSSPSSLFHDL---FISSSSRKFKVRNFASSFQPPSPLTPHSKTFLHANHVSLQE 217
MAY+LCSSPSSLFHDL SSSSRKFK+RN +SS LTPHSKT LH + + E
Sbjct: 1 MAYNLCSSPSSLFHDLPSISSSSSSRKFKLRNLSSS-----SLTPHSKTLLHVS-LHEHE 54
Query: 218 PIPQQLAQGVISEVHANSEDPLGXXXXXXXXXXXYIWVNPKSRRAKQLGKKSYDARYTSL 397
PIP+ L S + S YIWVNP+S RAKQL +SYDARYTSL
Sbjct: 55 PIPEHLPPDAKSSSSSKSN---------------YIWVNPRSPRAKQLESRSYDARYTSL 99
Query: 398 VNIAHSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITPT 577
VN+AHSLDSCNP++ DVS VLK LGD+V+EQDAVIVINNM NS P VL YFQR+I PT
Sbjct: 100 VNLAHSLDSCNPSQEDVSLVLKDLGDRVIEQDAVIVINNMSNSRVVPFVLNYFQRRIRPT 159
Query: 578 REVILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVEW 757
REVILYNVTLKVFRK KDLD EKLFDEML+RGV+PDNVTFSTIISCAR C LPNKAVEW
Sbjct: 160 REVILYNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVTFSTIISCARICSLPNKAVEW 219
Query: 758 FEKMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGL 937
FEKM S+GCEPDDVTYS MIDAYG+AGNIDMAL LYDRARTEKWR+DTVTFSTLIKMYGL
Sbjct: 220 FEKMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGL 279
Query: 938 AGNYDGCLNVYEEMKAVGVKPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
AGNYDGCLNVY+EMK +GVKPN+V+YNTLLDAMGRAKRPWQAK+IY EM NNGFSP
Sbjct: 280 AGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSP 335
Score = 64.7 bits (156), Expect = 4e-08
Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 36/211 (17%)
Frame = +2
Query: 581 EVILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVEWF 760
+ + ++ +K++ + DG ++ EM GVKP+ V ++T++ P +A +
Sbjct: 266 DTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIY 325
Query: 761 EKMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRI--------------- 895
+M + G P+ VTY+ ++ AYG+ + AL +Y + + +
Sbjct: 326 TEMTNNGFSPNWVTYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADL 385
Query: 896 ---------------------DTVTFSTLIKMYGLAGNYDGCLNVYEEMKAVGVKPNLVV 1012
D+ TFS+LI +Y GN + EM G +P + V
Sbjct: 386 GLANEAFEIFEDMKTSATCLCDSWTFSSLITIYSCTGNVSEAERMLNEMIESGSQPTIFV 445
Query: 1013 YNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
+L+ G+ R + ++ + G SP
Sbjct: 446 LTSLVQCYGKVGRTDDVVKTFNQLLDLGISP 476
>ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 689
Score = 506 bits (1304), Expect = e-141
Identities = 261/357 (73%), Positives = 286/357 (80%), Gaps = 4/357 (1%)
Frame = +2
Query: 47 MAYHLCSSPSSLFHDL----FISSSSRKFKVRNFASSFQPPSPLTPHSKTFLHANHVSLQ 214
MAY+LCSSPSSLFHDL SSS RKFK+RN +S FQP TPHSKT LH VSL
Sbjct: 1 MAYNLCSSPSSLFHDLPSISSSSSSCRKFKLRNSSSFFQPSPSPTPHSKTLLH---VSLH 57
Query: 215 EPIPQQLAQGVISEVHANSEDPLGXXXXXXXXXXXYIWVNPKSRRAKQLGKKSYDARYTS 394
EPIP+ L HANS YIWVNP+S RAKQL ++SYDARYTS
Sbjct: 58 EPIPEHLPP------HANSSSS---------SKSNYIWVNPRSPRAKQLERRSYDARYTS 102
Query: 395 LVNIAHSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITP 574
LVN+A SLDSCNP++ DVS VLK L +V+EQDAVIVINNM N P VL YFQR+I P
Sbjct: 103 LVNLALSLDSCNPSQEDVSLVLKDLWGRVIEQDAVIVINNMSNPRVVPFVLNYFQRRIRP 162
Query: 575 TREVILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVE 754
TREVILYNVTLKVFRK KDLD EKLFDEML+RGV+PDNV+FSTIISCAR C LPNKAVE
Sbjct: 163 TREVILYNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVSFSTIISCARICSLPNKAVE 222
Query: 755 WFEKMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYG 934
WFEKMPS+ CEPDDVTYS MIDAYG+AGNIDMAL LYDRARTEKWR+D+VTFSTLIKMYG
Sbjct: 223 WFEKMPSFRCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDSVTFSTLIKMYG 282
Query: 935 LAGNYDGCLNVYEEMKAVGVKPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
LAGNYDGCLNVY+EMKA+GVK N+V+YNTLLDAMGRAKRPWQAK+IY EM NNGF P
Sbjct: 283 LAGNYDGCLNVYQEMKALGVKSNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLP 339
Score = 63.9 bits (154), Expect = 7e-08
Identities = 39/174 (22%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Frame = +2
Query: 587 ILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVEWFEK 766
+ ++ +K++ + DG ++ EM GVK + V ++T++ P +A + +
Sbjct: 272 VTFSTLIKMYGLAGNYDGCLNVYQEMKALGVKSNMVIYNTLLDAMGRAKRPWQAKSIYTE 331
Query: 767 MPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 946
M + G P+ TY+ ++ AYG+ + AL +Y + + ++T ++TL+ M G
Sbjct: 332 MTNNGFLPNWATYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGL 391
Query: 947 YDGCLNVYEEMKAVGV-KPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
D ++E+MK+ + +++L+ + +A+ + EM +GF P
Sbjct: 392 ADDAFKIFEDMKSSATCLCDSWTFSSLITIYSCSGNVSEAERMLNEMIESGFQP 445
Score = 60.5 bits (145), Expect = 7e-07
Identities = 38/175 (21%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Frame = +2
Query: 584 VILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVEWFE 763
+++YN L + K A+ ++ EM G P+ T+++++ A+ ++
Sbjct: 306 MVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLPNWATYASLLRAYGRGRYSEDALFVYK 365
Query: 764 KMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRI-DTVTFSTLIKMYGLA 940
+M G E + Y+ ++ G D A +++ ++ + D+ TFS+LI +Y +
Sbjct: 366 EMKEKGMEMNTHLYNTLLAMCADLGLADDAFKIFEDMKSSATCLCDSWTFSSLITIYSCS 425
Query: 941 GNYDGCLNVYEEMKAVGVKPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
GN + EM G +P + V +L+ G+ R + ++ + G SP
Sbjct: 426 GNVSEAERMLNEMIESGFQPTIFVLTSLVQCYGKVGRTDDVLKTFNQLLDLGISP 480
>ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 486 bits (1252), Expect = e-135
Identities = 245/357 (68%), Positives = 282/357 (78%), Gaps = 4/357 (1%)
Frame = +2
Query: 47 MAYHLCSSPSSLFHDLFIS----SSSRKFKVRNFASSFQPPSPLTPHSKTFLHANHVSLQ 214
MAYHLCSSPSSL HD S SRK ++R+F S P+ L+ HS+TFL HVSL+
Sbjct: 1 MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60
Query: 215 EPIPQQLAQGVISEVHANSEDPLGXXXXXXXXXXXYIWVNPKSRRAKQLGKKSYDARYTS 394
+PIPQ+ + S NS+DP YIWVNP+S RA +L + SYDARY S
Sbjct: 61 DPIPQETQKADASNP-PNSQDP-------DRKTKSYIWVNPRSPRASKLRQHSYDARYAS 112
Query: 395 LVNIAHSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITP 574
LV IA SLDSC TE DVS+VL+ LGDK+LEQDAVIV+NNM N TA L +F++++ P
Sbjct: 113 LVKIAESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKP 172
Query: 575 TREVILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVE 754
+REVILYNVTLKVFRKC++LD AEKLFDEMLERGVKPDN+TFSTIISCAR LPNKAVE
Sbjct: 173 SREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVE 232
Query: 755 WFEKMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYG 934
WFEKMP +GC PDDVTYS MIDAYG+AGN+DMAL LYDRARTEKWRID VTFSTLI++YG
Sbjct: 233 WFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYG 292
Query: 935 LAGNYDGCLNVYEEMKAVGVKPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
++GN+DGCLNVYEEMKA+GVKPNLV+YNTLLDAMGRAKRPWQAK IYKEM NNG P
Sbjct: 293 MSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQP 349
Score = 73.6 bits (179), Expect = 8e-11
Identities = 40/174 (22%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 587 ILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVEWFEK 766
+ ++ ++++ + DG +++EM GVKP+ V ++T++ P +A +++
Sbjct: 282 VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKE 341
Query: 767 MPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 946
M + G +P TY+ ++ AYG+A + AL +Y + + + V ++TL+ M G
Sbjct: 342 MTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGY 401
Query: 947 YDGCLNVYEEMKAVG-VKPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
+ ++E+MK+ G P+ +++L+ + + +A+ + M GF P
Sbjct: 402 TEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEP 455
>emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 486 bits (1252), Expect = e-135
Identities = 245/357 (68%), Positives = 282/357 (78%), Gaps = 4/357 (1%)
Frame = +2
Query: 47 MAYHLCSSPSSLFHDLFIS----SSSRKFKVRNFASSFQPPSPLTPHSKTFLHANHVSLQ 214
MAYHLCSSPSSL HD S SRK ++R+F S P+ L+ HS+TFL HVSL+
Sbjct: 1 MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60
Query: 215 EPIPQQLAQGVISEVHANSEDPLGXXXXXXXXXXXYIWVNPKSRRAKQLGKKSYDARYTS 394
+PIPQ+ + S NS+DP YIWVNP+S RA +L + SYDARY S
Sbjct: 61 DPIPQETQKADASNP-PNSQDP-------DRKTKSYIWVNPRSPRASKLRQHSYDARYAS 112
Query: 395 LVNIAHSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITP 574
LV IA SLDSC TE DVS+VL+ LGDK+LEQDAVIV+NNM N TA L +F++++ P
Sbjct: 113 LVKIAESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKP 172
Query: 575 TREVILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVE 754
+REVILYNVTLKVFRKC++LD AEKLFDEMLERGVKPDN+TFSTIISCAR LPNKAVE
Sbjct: 173 SREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVE 232
Query: 755 WFEKMPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYG 934
WFEKMP +GC PDDVTYS MIDAYG+AGN+DMAL LYDRARTEKWRID VTFSTLI++YG
Sbjct: 233 WFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYG 292
Query: 935 LAGNYDGCLNVYEEMKAVGVKPNLVVYNTLLDAMGRAKRPWQAKTIYKEMANNGFSP 1105
++GN+DGCLNVYEEMKA+GVKPNLV+YNTLLDAMGRAKRPWQAK IYKEM NNG P
Sbjct: 293 MSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQP 349
Score = 74.3 bits (181), Expect = 5e-11
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Frame = +2
Query: 587 ILYNVTLKVFRKCKDLDGAEKLFDEMLERGVKPDNVTFSTIISCARSCYLPNKAVEWFEK 766
+ ++ ++++ + DG +++EM GVKP+ V ++T++ P +A +++
Sbjct: 282 VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKE 341
Query: 767 MPSYGCEPDDVTYSVMIDAYGKAGNIDMALNLYDRARTE---KWRIDTVTFSTLIKMYGL 937
M + G +P TY+ ++ AYG+A + AL +Y + + D+ TFS+LI +Y
Sbjct: 342 MTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLITIYSC 401
Query: 938 AGNYDGCLNVYEEMKAVGVKPNLVVYNTLLDAMGRAKR 1051
+G + M G +PN+ V +L+ G+A R
Sbjct: 402 SGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANR 439