BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012640
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44709.1| unknown [Lotus japonicus]                              297   2e-78
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi...   279   5e-73
ref|XP_003596634.1| Pentatricopeptide repeat-containing protein ...   259   3e-67
ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containi...   256   3e-66
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...   222   7e-56

>gb|AFK44709.1| unknown [Lotus japonicus]
          Length = 217

 Score =  297 bits (760), Expect = 2e-78
 Identities = 147/174 (84%), Positives = 159/174 (91%)
 Frame = -3

Query: 714 EFQFFCHVIKDENPSSGTRLGYYEMMLWLRVNNEEKIQGLCNYITENDGEDTSDLREKYL 535
           EFQFFCHVIK+ENPSS TRLGYYE+MLWLRVNNEEKIQG+ NYI ENDG+D S+LRE YL
Sbjct: 38  EFQFFCHVIKEENPSSVTRLGYYELMLWLRVNNEEKIQGIYNYIAENDGQDPSNLRESYL 97

Query: 534 LALCESERKEKILEVLEFVDIMKLSSAESIEKIFQALGRLLLEPVAEKFLLDFKTSNHEA 355
           LALCES+RKEKILE+LE +DI KLSSAES+ KIFQALGRLLLEPVAEK LLDFKTSN+EA
Sbjct: 98  LALCESDRKEKILELLEIIDIKKLSSAESVAKIFQALGRLLLEPVAEKLLLDFKTSNYEA 157

Query: 354 DKITNFIASYAVSIPNLLVEDVIKKFNDLHQELEVSPSPSSYEKLVLHSCALLK 193
           D ITNFIASYAVSIPNLLVEDVI KF DLHQ LE+SPS SSYEKL+LHSCAL K
Sbjct: 158 DNITNFIASYAVSIPNLLVEDVITKFKDLHQMLEISPSSSSYEKLILHSCALFK 211


>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial [Glycine max]
          Length = 755

 Score =  279 bits (713), Expect = 5e-73
 Identities = 137/174 (78%), Positives = 156/174 (89%)
 Frame = -3

Query: 714 EFQFFCHVIKDENPSSGTRLGYYEMMLWLRVNNEEKIQGLCNYITENDGEDTSDLREKYL 535
           EFQFFC VI+DENPSS  RLGYYEM++WL+ NNEEKIQG+C+ I EN GEDTSD++E YL
Sbjct: 226 EFQFFCVVIEDENPSSVARLGYYEMLMWLKDNNEEKIQGICDNIAENKGEDTSDIQENYL 285

Query: 534 LALCESERKEKILEVLEFVDIMKLSSAESIEKIFQALGRLLLEPVAEKFLLDFKTSNHEA 355
           LALCESER E+IL++LE +DI  LSSAES+ K+FQALGRLLLEPVAEKFLLDFKTS+HEA
Sbjct: 286 LALCESERMEEILKLLEIIDIKNLSSAESVAKVFQALGRLLLEPVAEKFLLDFKTSDHEA 345

Query: 354 DKITNFIASYAVSIPNLLVEDVIKKFNDLHQELEVSPSPSSYEKLVLHSCALLK 193
           D IT+FIASYAVSIP+L V+DVIKKF DLHQ LEVSPS SSYEKL+LHSCALLK
Sbjct: 346 DNITDFIASYAVSIPDLSVKDVIKKFKDLHQRLEVSPSSSSYEKLILHSCALLK 399



 Score =  105 bits (262), Expect = 9e-21
 Identities = 69/169 (40%), Positives = 94/169 (55%), Gaps = 20/169 (11%)
 Frame = -3

Query: 447 IEKIFQALGRLLLEPVAEKF---------LLDFKTSNHEADKITNFIASYAVSIPNLLVE 295
           + +IF  + R  LE   E F         + D + +    D +       +  + N ++E
Sbjct: 438 VHRIFSTIHRYNLESNDETFRSMIDLFLKMKDIEGAYKMLDDLGKLNLKPSPGMYNAILE 497

Query: 294 DVIKKFN--------DLHQELEVSPSPSSYEKLVLHSCA---LLKNYEELKQSEFKATKQ 148
           +  ++ N        +  Q  +V P   ++  L+ +S     ++K YEELKQS   ATKQ
Sbjct: 498 ECFREKNISDGVRVLEHMQCADVKPDSQTFSYLISNSETEEDIVKYYEELKQSGIVATKQ 557

Query: 147 IFMELINTYAACGQLEKAKQVTLDPLIPVKSLNQIKSVLVSVLASHGQL 1
           IFM L+N YAACGQLEKAK+V LDPLIP KSLNQIK  LVSVLASHG+L
Sbjct: 558 IFMALVNAYAACGQLEKAKKVILDPLIPPKSLNQIKGFLVSVLASHGKL 606


>ref|XP_003596634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355485682|gb|AES66885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 523

 Score =  259 bits (663), Expect = 3e-67
 Identities = 134/197 (68%), Positives = 152/197 (77%)
 Frame = -3

Query: 714 EFQFFCHVIKDENPSSGTRLGYYEMMLWLRVNNEEKIQGLCNYITENDGEDTSDLREKYL 535
           EFQFFCH+IK+E PSS  RLGYYEMMLWL+VNNEEKIQ LCNYI END +DT  LRE YL
Sbjct: 227 EFQFFCHIIKEEVPSSTARLGYYEMMLWLKVNNEEKIQDLCNYIAENDADDTFYLRENYL 286

Query: 534 LALCESERKEKILEVLEFVDIMKLSSAESIEKIFQALGRLLLEPVAEKFLLDFKTSNHEA 355
           LALCESERKE ILEVLE +DI KLSS  SI K+FQ LGRLLLEPVAE+ LLDFK S+++ 
Sbjct: 287 LALCESERKENILEVLEIMDIKKLSSVGSIAKVFQTLGRLLLEPVAEELLLDFKASDYDE 346

Query: 354 DKITNFIASYAVSIPNLLVEDVIKKFNDLHQELEVSPSPSSYEKLVLHSCALLKNYEELK 175
           D IT FIASY VSIP+L VE  I KF DLH++LEV PS SSYEKL+ H+CALLK +    
Sbjct: 347 DNITTFIASYTVSIPDLSVEVGINKFKDLHEKLEVLPSSSSYEKLISHNCALLKEH-NCS 405

Query: 174 QSEFKATKQIFMELINT 124
             EF     +  EL +T
Sbjct: 406 DGEFDQLLLLLEELNDT 422


>ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21880,
           mitochondrial-like [Glycine max]
          Length = 705

 Score =  256 bits (654), Expect = 3e-66
 Identities = 133/181 (73%), Positives = 152/181 (83%), Gaps = 7/181 (3%)
 Frame = -3

Query: 714 EFQFFCHVIKDENPSSGTRLGYYEMMLWLRVNNEEKIQGLCNYITENDGEDTSDLREKYL 535
           EF+FFC VIKDENPSS TRLGYYEM+LWL+ NNEEKIQG+C+YI END EDTSD+     
Sbjct: 182 EFKFFCVVIKDENPSSVTRLGYYEMLLWLKDNNEEKIQGICDYIAEND-EDTSDI----- 235

Query: 534 LALCESERKEKILEVLEFVDIMKLSSAESIEKIFQALGRLLLEPVAEKFLLDFKTSNHEA 355
              CESER ++IL++LE +DI  LSSAES+ K+FQALGRLLLEP+AEKFLLDFKTS+HEA
Sbjct: 236 ---CESERMKEILKLLEIIDIKNLSSAESVAKVFQALGRLLLEPLAEKFLLDFKTSDHEA 292

Query: 354 DKITNFIASYAVSIPNL-------LVEDVIKKFNDLHQELEVSPSPSSYEKLVLHSCALL 196
           D ITNFIASYAVSIP+L       +VEDVIKKF DLHQ LEVSPS SSYEKL+LHSCALL
Sbjct: 293 DNITNFIASYAVSIPDLSIRNISQMVEDVIKKFKDLHQRLEVSPSSSSYEKLILHSCALL 352

Query: 195 K 193
           +
Sbjct: 353 E 353



 Score =  105 bits (262), Expect = 9e-21
 Identities = 58/88 (65%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
 Frame = -3

Query: 255 EVSPSPSSYEKLVLHSCA---LLKNYEELKQSEFKATKQIFMELINTYAACGQLEKAKQV 85
           +V P   ++  L+ +S     + K YEELKQS   ATKQIFM LIN YAACGQLEKAK+V
Sbjct: 473 DVKPDSQTFSCLISNSETKEDIAKYYEELKQSGIVATKQIFMALINAYAACGQLEKAKKV 532

Query: 84  TLDPLIPVKSLNQIKSVLVSVLASHGQL 1
            LDPLIP KSLNQIK  LVSVLASHGQL
Sbjct: 533 ILDPLIPPKSLNQIKGFLVSVLASHGQL 560


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 1117

 Score =  222 bits (565), Expect = 7e-56
 Identities = 109/174 (62%), Positives = 136/174 (78%)
 Frame = -3

Query: 714 EFQFFCHVIKDENPSSGTRLGYYEMMLWLRVNNEEKIQGLCNYITENDGEDTSDLREKYL 535
           EFQ F  +IK ENPSS +RLGYYEM+LWLRV NEE I+ +C YIT    E+TS LRE YL
Sbjct: 229 EFQLFTDIIKTENPSSASRLGYYEMLLWLRVGNEEMIRDICEYITVEAREETSALRESYL 288

Query: 534 LALCESERKEKILEVLEFVDIMKLSSAESIEKIFQALGRLLLEPVAEKFLLDFKTSNHEA 355
           +ALCES+RK +IL+V++ +D+ KLSSA+SI  IFQ+LGRL LE +A+  LLD +  +H+A
Sbjct: 289 MALCESDRKMQILDVVKNIDVTKLSSAKSIADIFQSLGRLHLESIADDLLLDLRACDHDA 348

Query: 354 DKITNFIASYAVSIPNLLVEDVIKKFNDLHQELEVSPSPSSYEKLVLHSCALLK 193
           D I+NFI SYAVSIPNL VED+I KF ++H+ LEV PS SSYEKL+LH C L K
Sbjct: 349 DNISNFIVSYAVSIPNLAVEDIIPKFKNMHELLEVLPSTSSYEKLILHCCGLDK 402



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 49/67 (73%), Positives = 55/67 (82%)
 Frame = -3

Query: 201  LLKNYEELKQSEFKATKQIFMELINTYAACGQLEKAKQVTLDPLIPVKSLNQIKSVLVSV 22
            ++K  EE+KQS   ATKQIFM LIN+YAA G+LEKAKQV LD  IP KSLN+IKSVLVS 
Sbjct: 834  IIKYCEEMKQSGVHATKQIFMALINSYAASGKLEKAKQVVLDSNIPNKSLNEIKSVLVSA 893

Query: 21   LASHGQL 1
            LASHGQL
Sbjct: 894  LASHGQL 900