BLASTX nr result
ID: Glycyrrhiza23_contig00012618
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00012618 (423 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 171 4e-41 gb|ACU24484.1| unknown [Glycine max] 171 4e-41 ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycin... 171 4e-41 ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi... 171 6e-41 ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2... 167 6e-40 >ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max] Length = 263 Score = 171 bits (434), Expect = 4e-41 Identities = 79/81 (97%), Positives = 81/81 (100%) Frame = +1 Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELK+PPRPPCYCFVEFDNARDAE+ Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60 Query: 307 AIRGRDGYNFDGCRLRVELAH 369 AIRGRDGYNFDGCRLRVELAH Sbjct: 61 AIRGRDGYNFDGCRLRVELAH 81 >gb|ACU24484.1| unknown [Glycine max] Length = 267 Score = 171 bits (434), Expect = 4e-41 Identities = 79/81 (97%), Positives = 81/81 (100%) Frame = +1 Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELK+PPRPPCYCFVEFDNARDAE+ Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60 Query: 307 AIRGRDGYNFDGCRLRVELAH 369 AIRGRDGYNFDGCRLRVELAH Sbjct: 61 AIRGRDGYNFDGCRLRVELAH 81 >ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max] gi|255636783|gb|ACU18725.1| unknown [Glycine max] Length = 267 Score = 171 bits (434), Expect = 4e-41 Identities = 79/81 (97%), Positives = 81/81 (100%) Frame = +1 Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELK+PPRPPCYCFVEFDNARDAE+ Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60 Query: 307 AIRGRDGYNFDGCRLRVELAH 369 AIRGRDGYNFDGCRLRVELAH Sbjct: 61 AIRGRDGYNFDGCRLRVELAH 81 >ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula] Length = 380 Score = 171 bits (433), Expect = 6e-41 Identities = 79/85 (92%), Positives = 83/85 (97%) Frame = +1 Query: 115 LLSNMSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNAR 294 L SNMS RFSRTIYVGNLP+DIRESEIEDLFYKYGRIM+IELK+PPRPPCYCFVEFDNAR Sbjct: 104 LQSNMSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNAR 163 Query: 295 DAEEAIRGRDGYNFDGCRLRVELAH 369 DAE+AIRGRDGYNFDGCRLRVELAH Sbjct: 164 DAEDAIRGRDGYNFDGCRLRVELAH 188 >ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa] Length = 240 Score = 167 bits (424), Expect = 6e-40 Identities = 76/81 (93%), Positives = 81/81 (100%) Frame = +1 Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306 MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+D+ELKIPPRPPCYCFVEF+NARDAE+ Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60 Query: 307 AIRGRDGYNFDGCRLRVELAH 369 AIRGRDGYNFDGCRLRVELAH Sbjct: 61 AIRGRDGYNFDGCRLRVELAH 81