BLASTX nr result

ID: Glycyrrhiza23_contig00012618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012618
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   171   4e-41
gb|ACU24484.1| unknown [Glycine max]                                  171   4e-41
ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycin...   171   4e-41
ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   171   6e-41
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40

>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +1

Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306
           MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELK+PPRPPCYCFVEFDNARDAE+
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 307 AIRGRDGYNFDGCRLRVELAH 369
           AIRGRDGYNFDGCRLRVELAH
Sbjct: 61  AIRGRDGYNFDGCRLRVELAH 81


>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +1

Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306
           MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELK+PPRPPCYCFVEFDNARDAE+
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 307 AIRGRDGYNFDGCRLRVELAH 369
           AIRGRDGYNFDGCRLRVELAH
Sbjct: 61  AIRGRDGYNFDGCRLRVELAH 81


>ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
           gi|255636783|gb|ACU18725.1| unknown [Glycine max]
          Length = 267

 Score =  171 bits (434), Expect = 4e-41
 Identities = 79/81 (97%), Positives = 81/81 (100%)
 Frame = +1

Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306
           MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELK+PPRPPCYCFVEFDNARDAE+
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 307 AIRGRDGYNFDGCRLRVELAH 369
           AIRGRDGYNFDGCRLRVELAH
Sbjct: 61  AIRGRDGYNFDGCRLRVELAH 81


>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
           gi|355491412|gb|AES72615.1| RNA-binding protein
           [Medicago truncatula]
          Length = 380

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/85 (92%), Positives = 83/85 (97%)
 Frame = +1

Query: 115 LLSNMSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNAR 294
           L SNMS RFSRTIYVGNLP+DIRESEIEDLFYKYGRIM+IELK+PPRPPCYCFVEFDNAR
Sbjct: 104 LQSNMSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNAR 163

Query: 295 DAEEAIRGRDGYNFDGCRLRVELAH 369
           DAE+AIRGRDGYNFDGCRLRVELAH
Sbjct: 164 DAEDAIRGRDGYNFDGCRLRVELAH 188


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/81 (93%), Positives = 81/81 (100%)
 Frame = +1

Query: 127 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEE 306
           MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+D+ELKIPPRPPCYCFVEF+NARDAE+
Sbjct: 1   MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60

Query: 307 AIRGRDGYNFDGCRLRVELAH 369
           AIRGRDGYNFDGCRLRVELAH
Sbjct: 61  AIRGRDGYNFDGCRLRVELAH 81


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