BLASTX nr result

ID: Glycyrrhiza23_contig00012603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012603
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48178.1| unknown [Medicago truncatula]                          173   2e-41
ref|XP_003534135.1| PREDICTED: protein TIFY 6B-like [Glycine max]     161   6e-38
ref|XP_003619852.1| Protein TIFY 6B [Medicago truncatula] gi|355...   132   3e-29
ref|XP_003619851.1| Protein TIFY 6B [Medicago truncatula] gi|355...   132   3e-29
ref|XP_002322120.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-23

>gb|AFK48178.1| unknown [Medicago truncatula]
          Length = 373

 Score =  173 bits (438), Expect = 2e-41
 Identities = 93/134 (69%), Positives = 109/134 (81%), Gaps = 1/134 (0%)
 Frame = -3

Query: 441 MEKEFLGFGSKNGAWVNIKEEATNKPKDPVKGSGMQWLFSNKVSALPQFLSFK-TTQEDR 265
           ME+EFLGF SKN  W  +KE+A+NKPKD V+ SGMQW FSNKVS LPQF+SFK  T EDR
Sbjct: 1   MEREFLGFSSKNSPWTTMKEDASNKPKDQVRSSGMQWSFSNKVSNLPQFMSFKNNTHEDR 60

Query: 264 PRNTTILDPLPLASSGYVTISTKDAAFDSNQKPFLGVTQKNLSIGKQVGNKHGMSSVYPL 85
            RN  ++D  P+ASSGY+TISTKD AFDSNQK FLGVTQ+NL+I KQVGNKHG+ ++YP+
Sbjct: 61  SRN-NVMD--PVASSGYMTISTKD-AFDSNQKSFLGVTQENLAI-KQVGNKHGI-TIYPI 114

Query: 84  QCSDAQSACLQEGR 43
           Q SDAQS C QE R
Sbjct: 115 QSSDAQSVCNQEAR 128


>ref|XP_003534135.1| PREDICTED: protein TIFY 6B-like [Glycine max]
          Length = 386

 Score =  161 bits (408), Expect = 6e-38
 Identities = 89/136 (65%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = -3

Query: 441 MEKEFLGFGSKNGAWVNIKEEATNKPKDPVKGSGMQWLFSNKVSALPQFLSFKTTQEDRP 262
           ME+EF G  SKNGAW  +K++A NK +D V+ SGMQW F NKVSALPQFLSFKT QED+P
Sbjct: 1   MEREFFGLSSKNGAWTTMKDDAVNKSRDQVRSSGMQWSFPNKVSALPQFLSFKTNQEDKP 60

Query: 261 RNTTILDPLPLASSGYVTISTKDAAFDSNQKPFLGVTQKNLSIGKQ-VGNKHGMSSVYPL 85
           R  TIL+  PLASSGY+ +ST+  AFDSNQK FLG+T +NLSI K   GNK GM +VYPL
Sbjct: 61  RK-TILE--PLASSGYMAMSTQ-YAFDSNQKSFLGLTNRNLSISKHAAGNKQGM-TVYPL 115

Query: 84  QCSDAQSACLQEGRIF 37
           QC DAQS   +E RIF
Sbjct: 116 QCCDAQS---EEARIF 128


>ref|XP_003619852.1| Protein TIFY 6B [Medicago truncatula] gi|355494867|gb|AES76070.1|
           Protein TIFY 6B [Medicago truncatula]
          Length = 376

 Score =  132 bits (333), Expect = 3e-29
 Identities = 75/107 (70%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
 Frame = -3

Query: 360 DPVKGSGMQWLFSNKVSALPQFLSFK-TTQEDRPRNTTILDPLPLASSGYVTISTKDAAF 184
           D V+ SGMQW FSNKVS LPQF+SFK  T EDR RN  ++D  P+ASSGY+TISTKD AF
Sbjct: 36  DAVRSSGMQWSFSNKVSNLPQFMSFKNNTHEDRSRN-NVMD--PVASSGYMTISTKD-AF 91

Query: 183 DSNQKPFLGVTQKNLSIGKQVGNKHGMSSVYPLQCSDAQSACLQEGR 43
           DSNQK FLGVTQ+NL+I KQVGNKHG+ ++YP+Q SDAQS C QE R
Sbjct: 92  DSNQKSFLGVTQENLAI-KQVGNKHGI-TIYPIQSSDAQSVCNQEAR 136


>ref|XP_003619851.1| Protein TIFY 6B [Medicago truncatula] gi|355494866|gb|AES76069.1|
           Protein TIFY 6B [Medicago truncatula]
          Length = 437

 Score =  132 bits (333), Expect = 3e-29
 Identities = 75/107 (70%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
 Frame = -3

Query: 360 DPVKGSGMQWLFSNKVSALPQFLSFK-TTQEDRPRNTTILDPLPLASSGYVTISTKDAAF 184
           D V+ SGMQW FSNKVS LPQF+SFK  T EDR RN  ++D  P+ASSGY+TISTKD AF
Sbjct: 36  DAVRSSGMQWSFSNKVSNLPQFMSFKNNTHEDRSRN-NVMD--PVASSGYMTISTKD-AF 91

Query: 183 DSNQKPFLGVTQKNLSIGKQVGNKHGMSSVYPLQCSDAQSACLQEGR 43
           DSNQK FLGVTQ+NL+I KQVGNKHG+ ++YP+Q SDAQS C QE R
Sbjct: 92  DSNQKSFLGVTQENLAI-KQVGNKHGI-TIYPIQSSDAQSVCNQEAR 136


>ref|XP_002322120.1| predicted protein [Populus trichocarpa] gi|222869116|gb|EEF06247.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  112 bits (280), Expect = 5e-23
 Identities = 65/114 (57%), Positives = 83/114 (72%), Gaps = 6/114 (5%)
 Frame = -3

Query: 441 MEKEFLGFGSKNGAWVNIKEEATNKP-KD--PVKGSGMQWLFSNKVSALPQFLSFKTTQE 271
           ME++FLG GSKN   V IKEEAT+ P KD  P++GSGMQW FSNKVSA+PQFLSFK++ E
Sbjct: 1   MERDFLGLGSKNNP-VTIKEEATDTPLKDSVPMRGSGMQWSFSNKVSAIPQFLSFKSSME 59

Query: 270 DRPRNTTILDPLPLASSGYVTISTKDAAFDSNQKPFLGVTQ---KNLSIGKQVG 118
           D+PR   + DP+  +SSGY++IST D AFDSNQK +  + Q    N  + K +G
Sbjct: 60  DKPRK-AVHDPMASSSSGYMSISTAD-AFDSNQKSYSALIQMITSNSIVSKPLG 111


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