BLASTX nr result

ID: Glycyrrhiza23_contig00012599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012599
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42356.1| unknown [Medicago truncatula]                          295   8e-78
gb|ACJ85514.1| unknown [Medicago truncatula]                          288   1e-75
gb|AFK48784.1| unknown [Lotus japonicus]                              288   1e-75
ref|XP_003529438.1| PREDICTED: reticulon-like protein B22-like [...   253   4e-65
ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64

>gb|AFK42356.1| unknown [Medicago truncatula]
          Length = 180

 Score =  295 bits (756), Expect = 8e-78
 Identities = 154/183 (84%), Positives = 162/183 (88%), Gaps = 1/183 (0%)
 Frame = -3

Query: 730 MNMNSSGGSR-ERKRMGSGGEVGKATIALVCGSLVYYHCAFRDSTLVSLFSDVFIVLLCS 554
           MN NSS     ERKR+    E+GKA IALVCG+LVYYHCAF++S +VSLFSDVFIVLLCS
Sbjct: 2   MNSNSSEVVVVERKRI----EIGKAIIALVCGTLVYYHCAFKNSAIVSLFSDVFIVLLCS 57

Query: 553 LAILGLLFRQMNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFF 374
           LAILGLLFRQM IQVPVDPLEWQISQDTAN IVA  ANTVGAAESVLRVAATGHDKRLFF
Sbjct: 58  LAILGLLFRQMTIQVPVDPLEWQISQDTANTIVASFANTVGAAESVLRVAATGHDKRLFF 117

Query: 373 KVILCLYALSALGRLAFGITIAYAGLCLFCLYMFAECSQSISSAVAWLLGRRNDTSEEHD 194
           KVILCLYALSALGRLA GITIAYAGLCLFCLYMFAECSQSISS +AW LGR+NDT EE D
Sbjct: 118 KVILCLYALSALGRLALGITIAYAGLCLFCLYMFAECSQSISSCLAWFLGRKNDTGEEQD 177

Query: 193 TIM 185
           TIM
Sbjct: 178 TIM 180


>gb|ACJ85514.1| unknown [Medicago truncatula]
          Length = 180

 Score =  288 bits (738), Expect = 1e-75
 Identities = 153/183 (83%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
 Frame = -3

Query: 730 MNMNSSGGSR-ERKRMGSGGEVGKATIALVCGSLVYYHCAFRDSTLVSLFSDVFIVLLCS 554
           MN NSS     ERKR+    E+GKA IALVCG+LVYYHCAF++S +VSLFSDVFIVLLCS
Sbjct: 2   MNSNSSEVVVVERKRI----EIGKAIIALVCGTLVYYHCAFKNSAIVSLFSDVFIVLLCS 57

Query: 553 LAILGLLFRQMNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFF 374
           LAILGLLFRQM IQVPVDPLE QISQDTAN IVA  ANTVGAAESVLRVAATGHDKRLFF
Sbjct: 58  LAILGLLFRQMTIQVPVDPLERQISQDTANTIVASFANTVGAAESVLRVAATGHDKRLFF 117

Query: 373 KVILCLYALSALGRLAFGITIAYAGLCLFCLYMFAECSQSISSAVAWLLGRRNDTSEEHD 194
           KVILCLYALSALG LA GITIAYAGLCLFCLYMFAECSQSISS +AW LGRRNDT EE D
Sbjct: 118 KVILCLYALSALGGLALGITIAYAGLCLFCLYMFAECSQSISSCLAWFLGRRNDTGEEQD 177

Query: 193 TIM 185
           TIM
Sbjct: 178 TIM 180


>gb|AFK48784.1| unknown [Lotus japonicus]
          Length = 183

 Score =  288 bits (737), Expect = 1e-75
 Identities = 147/170 (86%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
 Frame = -3

Query: 700 ERKRMGSGG-EVGKATIALVCGSLVYYHCAFRDSTLVSLFSDVFIVLLCSLAILGLLFRQ 524
           ERK    G  E+GKA IALVCG+LVYYHCA+R+ST+VSLFSDVFIVLLCSLAILGLLFRQ
Sbjct: 10  ERKTTSVGEREMGKAIIALVCGTLVYYHCAYRNSTVVSLFSDVFIVLLCSLAILGLLFRQ 69

Query: 523 MNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLYALS 344
           MNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLY LS
Sbjct: 70  MNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLYVLS 129

Query: 343 ALGRLAFGITIAYAGLCLFCLYMFAECSQSISSAVAWLLGRRNDTSEEHD 194
           A+GRLA GITIAYAGLCLFCLYM AECSQSISS V WL+GRRN  S E D
Sbjct: 130 AIGRLALGITIAYAGLCLFCLYMLAECSQSISSGVGWLVGRRNYASGEQD 179


>ref|XP_003529438.1| PREDICTED: reticulon-like protein B22-like [Glycine max]
          Length = 173

 Score =  253 bits (646), Expect = 4e-65
 Identities = 136/180 (75%), Positives = 148/180 (82%)
 Frame = -3

Query: 724 MNSSGGSRERKRMGSGGEVGKATIALVCGSLVYYHCAFRDSTLVSLFSDVFIVLLCSLAI 545
           M+   GS  R R G  G +GKA IALV GSLVYYHCA+R+STLVSLFSDVFIVLLCSLAI
Sbjct: 1   MDGRNGSGSR-RSGEAGGMGKAIIALVIGSLVYYHCAYRNSTLVSLFSDVFIVLLCSLAI 59

Query: 544 LGLLFRQMNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVI 365
           LGLLFRQM IQVPVDPLEWQISQ++ANAIVA LANT+G AESV RVAATGHDKRLF KVI
Sbjct: 60  LGLLFRQMGIQVPVDPLEWQISQESANAIVAWLANTIGGAESVFRVAATGHDKRLFLKVI 119

Query: 364 LCLYALSALGRLAFGITIAYAGLCLFCLYMFAECSQSISSAVAWLLGRRNDTSEEHDTIM 185
           L LY  SALGRLA GIT+AYAGLCLFCLY+FAECSQSI+       GR  +T EE DTI+
Sbjct: 120 LSLYLFSALGRLARGITVAYAGLCLFCLYIFAECSQSIT-----FFGRTTET-EEQDTII 173


>ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|222851715|gb|EEE89262.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  251 bits (641), Expect = 2e-64
 Identities = 127/169 (75%), Positives = 141/169 (83%)
 Frame = -3

Query: 694 KRMGSGGEVGKATIALVCGSLVYYHCAFRDSTLVSLFSDVFIVLLCSLAILGLLFRQMNI 515
           K  G GGE+GKA I LV G+LVYYHCA+RDS+L SL SDV IVLLCSLAILGLLFRQ+NI
Sbjct: 14  KLEGGGGEIGKALIGLVSGTLVYYHCAYRDSSLFSLMSDVLIVLLCSLAILGLLFRQLNI 73

Query: 514 QVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLYALSALG 335
            VPVDPLEWQISQDTAN+IVA  ANT+GAAESVLRVAATGHDKRLFFKVI+CLY LSALG
Sbjct: 74  SVPVDPLEWQISQDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFKVIVCLYVLSALG 133

Query: 334 RLAFGITIAYAGLCLFCLYMFAECSQSISSAVAWLLGRRNDTSEEHDTI 188
           RL  G+TIAYA LCLFCLYM AE SQS S+ ++  LGR N  S + D +
Sbjct: 134 RLVSGVTIAYAALCLFCLYMLAENSQSGSACISRFLGRGNGISVDSDVL 182


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