BLASTX nr result

ID: Glycyrrhiza23_contig00012591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012591
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530786.1| PREDICTED: ABC transporter C family member 3...   243   1e-62
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   129   5e-28
emb|CBI39701.3| unnamed protein product [Vitis vinifera]              129   5e-28
emb|CBI39703.3| unnamed protein product [Vitis vinifera]              128   7e-28
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...   125   8e-27

>ref|XP_003530786.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1493

 Score =  243 bits (621), Expect = 1e-62
 Identities = 127/205 (61%), Positives = 143/205 (69%), Gaps = 3/205 (1%)
 Frame = +3

Query: 3   MMPPGTDFLLQPMFTRGISAXXXXXXXXXXXXXXXXXXXXXDQREKSESRNRFPDPGFLS 182
           MM  GTDFLLQP+FTRG+SA                     D REKSE R  F + GFL 
Sbjct: 12  MMHHGTDFLLQPIFTRGVSASLNLVLLLVLVVYWVWKKVQVDHREKSE-RKGFRNAGFLY 70

Query: 183 HKHSLVCSLAICVFNLVLCLLSYFPLYEEHDGSNELVTILDLVIKTVAWGVICVYLHVRN 362
           +KHSLVCSL ICVFNLVLCLLSYF LY  + GS ELVT+ DL +KT+ WG +C YLH RN
Sbjct: 71  YKHSLVCSLVICVFNLVLCLLSYFYLYNNY-GSEELVTLTDLALKTIVWGAVCAYLHSRN 129

Query: 363 SNAQEPSFPCFLRIWCWVYAFVSSCCLVTDFVIIYGNHVSLPIIYLVSDIGSSVTGLFLC 542
           S AQ+PS P  LRIW WVYAFV   CLV DFV +Y  H+ LP++YLV DIGSS+T LFLC
Sbjct: 130 SEAQDPSLPRMLRIWWWVYAFVCCSCLVIDFV-VYAKHIFLPVMYLVYDIGSSITSLFLC 188

Query: 543 YV---GCSTNNMAKLAPLEESLLNG 608
           YV   GCS N+MAKLAPLEE LLNG
Sbjct: 189 YVGSLGCSVNSMAKLAPLEEPLLNG 213


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  129 bits (323), Expect = 5e-28
 Identities = 78/199 (39%), Positives = 99/199 (49%)
 Frame = +3

Query: 12  PGTDFLLQPMFTRGISAXXXXXXXXXXXXXXXXXXXXXDQREKSESRNRFPDPGFLSHKH 191
           PGT FLL P+F R  SA                      +R K  +        FL +K 
Sbjct: 5   PGTGFLLNPVFLRVFSASLHLVLLLLLFVSWVC------KRIKGGAPENCKRTRFLYYKQ 58

Query: 192 SLVCSLAICVFNLVLCLLSYFPLYEEHDGSNELVTILDLVIKTVAWGVICVYLHVRNSNA 371
           +  C   + + NL+LC L+YF  Y        LVT+LDLV++T+AWG +CVYLH +   +
Sbjct: 59  TFACCQGLSLLNLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGS 118

Query: 372 QEPSFPCFLRIWCWVYAFVSSCCLVTDFVIIYGNHVSLPIIYLVSDIGSSVTGLFLCYVG 551
            EP FP  LR+W   Y  +S   LV D V     H SL I YLV DI   +TGLFLCY G
Sbjct: 119 VEPKFPFLLRVWWGFYFSISCYFLVLDIV---KKHQSLRIQYLVPDIVYVITGLFLCYSG 175

Query: 552 CSTNNMAKLAPLEESLLNG 608
               N  + + L E LLNG
Sbjct: 176 FLGKNQGEESILREPLLNG 194


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score =  129 bits (323), Expect = 5e-28
 Identities = 78/199 (39%), Positives = 99/199 (49%)
 Frame = +3

Query: 12  PGTDFLLQPMFTRGISAXXXXXXXXXXXXXXXXXXXXXDQREKSESRNRFPDPGFLSHKH 191
           PGT FLL P+F R  SA                      +R K  +        FL +K 
Sbjct: 11  PGTGFLLNPVFLRVFSASLHLVLLLLLFVSWVC------KRIKGGAPENCKRTRFLYYKQ 64

Query: 192 SLVCSLAICVFNLVLCLLSYFPLYEEHDGSNELVTILDLVIKTVAWGVICVYLHVRNSNA 371
           +  C   + + NL+LC L+YF  Y        LVT+LDLV++T+AWG +CVYLH +   +
Sbjct: 65  TFACCQGLSLLNLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGS 124

Query: 372 QEPSFPCFLRIWCWVYAFVSSCCLVTDFVIIYGNHVSLPIIYLVSDIGSSVTGLFLCYVG 551
            EP FP  LR+W   Y  +S   LV D V     H SL I YLV DI   +TGLFLCY G
Sbjct: 125 VEPKFPFLLRVWWGFYFSISCYFLVLDIV---KKHQSLRIQYLVPDIVYVITGLFLCYSG 181

Query: 552 CSTNNMAKLAPLEESLLNG 608
               N  + + L E LLNG
Sbjct: 182 FLGKNQGEESILREPLLNG 200


>emb|CBI39703.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  128 bits (322), Expect = 7e-28
 Identities = 75/199 (37%), Positives = 98/199 (49%)
 Frame = +3

Query: 12  PGTDFLLQPMFTRGISAXXXXXXXXXXXXXXXXXXXXXDQREKSESRNRFPDPGFLSHKH 191
           PG  FLL P+F R  SA                        E  +S         LS+K 
Sbjct: 11  PGIGFLLNPIFLRAFSASLHLVLLLLLFVSWVCKRIKGSALENCKSTRS------LSYKQ 64

Query: 192 SLVCSLAICVFNLVLCLLSYFPLYEEHDGSNELVTILDLVIKTVAWGVICVYLHVRNSNA 371
           +  CS  + + N  LC L+YF  Y       +LVT+LDLV++T+AWG +CVYLH +   +
Sbjct: 65  TFACSQGLSLLNFFLCFLNYFYWYRNGWSDEKLVTLLDLVLRTLAWGAVCVYLHTQFHGS 124

Query: 372 QEPSFPCFLRIWCWVYAFVSSCCLVTDFVIIYGNHVSLPIIYLVSDIGSSVTGLFLCYVG 551
            EP FP  LR+W   Y  +S  CLV D V     H SL I +LV DI   +TG+FLC+ G
Sbjct: 125 VEPKFPFLLRVWWGFYFSISCYCLVIDIV---KKHQSLTIQFLVPDIVYVITGMFLCHSG 181

Query: 552 CSTNNMAKLAPLEESLLNG 608
               N  + + L E LLNG
Sbjct: 182 FLGKNQDEESILREPLLNG 200


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score =  125 bits (313), Expect = 8e-27
 Identities = 75/199 (37%), Positives = 97/199 (48%)
 Frame = +3

Query: 12  PGTDFLLQPMFTRGISAXXXXXXXXXXXXXXXXXXXXXDQREKSESRNRFPDPGFLSHKH 191
           PG  FLL P+F R  SA                        E  + R RF     L +K 
Sbjct: 5   PGIGFLLNPVFLRAFSASLHLVLLLLLFVSWVCKRINGGALENCK-RTRF-----LYYKQ 58

Query: 192 SLVCSLAICVFNLVLCLLSYFPLYEEHDGSNELVTILDLVIKTVAWGVICVYLHVRNSNA 371
           +  C   + + N  LC L+YF  Y       +LVT+LDLV++T++WG +CVYLH +   +
Sbjct: 59  TFACCQGLSLLNFFLCFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGAVCVYLHTQFHGS 118

Query: 372 QEPSFPCFLRIWCWVYAFVSSCCLVTDFVIIYGNHVSLPIIYLVSDIGSSVTGLFLCYVG 551
            EP FP  LR+W   Y  +S  CLV D V       SL + +LV DI   +TGLFLCY G
Sbjct: 119 VEPKFPFLLRVWWGFYFSISCYCLVIDIV---KKDQSLQVQFLVPDIVYVITGLFLCYSG 175

Query: 552 CSTNNMAKLAPLEESLLNG 608
               N  K + L E LLNG
Sbjct: 176 FLGKNQGKESILREPLLNG 194



 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/107 (50%), Positives = 66/107 (61%)
 Frame = +3

Query: 288  LVTILDLVIKTVAWGVICVYLHVRNSNAQEPSFPCFLRIWCWVYAFVSSCCLVTDFVIIY 467
            LVT+LDLV++T+AWG +CVYLH +   + EP FP  LR+W   Y  +S  CLV D V   
Sbjct: 1036 LVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFPFLLRVWWGFYFSISCYCLVLDIV--- 1092

Query: 468  GNHVSLPIIYLVSDIGSSVTGLFLCYVGCSTNNMAKLAPLEESLLNG 608
              H SL I YLV DI   +TGLFLCY G    N  + + L E LLNG
Sbjct: 1093 KRHQSLRIQYLVPDIVYVITGLFLCYSGFLGKNQGEESILREPLLNG 1139


Top