BLASTX nr result

ID: Glycyrrhiza23_contig00012536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012536
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551367.1| PREDICTED: chaperone protein dnaJ 11, chloro...   171   3e-40
ref|XP_003600440.1| Chaperone protein dnaJ [Medicago truncatula]...   165   1e-38
ref|XP_003530823.1| PREDICTED: chaperone protein dnaJ 11, chloro...   164   3e-38
ref|XP_003544555.1| PREDICTED: chaperone protein dnaJ 11, chloro...   122   1e-25
ref|XP_002300579.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25

>ref|XP_003551367.1| PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Glycine
           max]
          Length = 151

 Score =  171 bits (432), Expect = 3e-40
 Identities = 82/103 (79%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
 Frame = +3

Query: 258 LYEVLRVEHDASPTEIKSAYRSLAKLYHPDAAAKRSPLND-DGDFIEIRNAYETLSDPSA 434
           LYEVLRVE DASPTEIKSAYRSLAKLYHPDAA +RSP  D DGDFI++RNAYETLSDPSA
Sbjct: 49  LYEVLRVERDASPTEIKSAYRSLAKLYHPDAAVQRSPETDGDGDFIQLRNAYETLSDPSA 108

Query: 435 RAMYDLSLTAAHGGKYRRFPSPLTQNRYSGFYTTRRWETDQCW 563
           RAMYD +L AAHGG++RRF + L++N  S FYTTRRWETDQCW
Sbjct: 109 RAMYDRTLAAAHGGRHRRFSTSLSRNHSSAFYTTRRWETDQCW 151


>ref|XP_003600440.1| Chaperone protein dnaJ [Medicago truncatula]
           gi|358349362|ref|XP_003638707.1| Chaperone protein dnaJ
           [Medicago truncatula] gi|355489488|gb|AES70691.1|
           Chaperone protein dnaJ [Medicago truncatula]
           gi|355504642|gb|AES85845.1| Chaperone protein dnaJ
           [Medicago truncatula] gi|388517361|gb|AFK46742.1|
           unknown [Medicago truncatula]
          Length = 161

 Score =  165 bits (418), Expect = 1e-38
 Identities = 95/164 (57%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
 Frame = +3

Query: 84  MPATLSLGSLSAVRPHRFSDE---PARFLRHPSSDWANXXXXXXXXXXXXXXXXXXXXXX 254
           M ATLSL  +S VRP RFSD+    ARF+  PSS+ +N                      
Sbjct: 1   MTATLSLAGISVVRPLRFSDDCSTSARFIAKPSSNISNRRRISIRAVTAAVETRRPATS- 59

Query: 255 XLYEVLRVEHDASPTEIKSAYRSLAKLYHPDAAAKRSPLNDDGDFIEIRNAYETLSDPSA 434
            LYEVLR+   AS  EIKSAYRSLAK+YHPDAAA+R    +DGDFIEIRNAYETLSDPS+
Sbjct: 60  -LYEVLRLNPGASAMEIKSAYRSLAKVYHPDAAARRLQECNDGDFIEIRNAYETLSDPSS 118

Query: 435 RAMYDLSLTAAHGGKYRRFPS-PLTQNRYSGFYTTRRWETDQCW 563
           R +YDLSL   HGG+ RRF + P+ Q R SGFYT RRWETDQCW
Sbjct: 119 RQIYDLSLMV-HGGRNRRFTAAPVMQKRNSGFYTNRRWETDQCW 161


>ref|XP_003530823.1| PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Glycine
           max]
          Length = 156

 Score =  164 bits (415), Expect = 3e-38
 Identities = 78/108 (72%), Positives = 90/108 (83%), Gaps = 6/108 (5%)
 Frame = +3

Query: 258 LYEVLRVEHDASPTEIKSAYRSLAKLYHPDAAAKRSPLND------DGDFIEIRNAYETL 419
           LY+VLRVE DASPTEIKSAYRSLAKL HPDAA +RSP  D      DGDFI++RNAYETL
Sbjct: 49  LYDVLRVERDASPTEIKSAYRSLAKLLHPDAAVRRSPETDGGGGYVDGDFIQLRNAYETL 108

Query: 420 SDPSARAMYDLSLTAAHGGKYRRFPSPLTQNRYSGFYTTRRWETDQCW 563
           SDPSA+A+YD++L A HGG++RRF +PL +N  S FYTTRRWETDQCW
Sbjct: 109 SDPSAKAIYDMTLAAPHGGRHRRFSTPLIRNHSSAFYTTRRWETDQCW 156


>ref|XP_003544555.1| PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Glycine
           max]
          Length = 142

 Score =  122 bits (306), Expect = 1e-25
 Identities = 67/104 (64%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
 Frame = +3

Query: 258 LYEVLRVEHDASPTEIKSAYRSLAKLYHPDAAAKRSPLNDDGDFIEIRNAYETLSDPSAR 437
           LYEVLR++ +AS  EIKSAYR+LAK+YHPD+A +RS  +D+ DFIEI +AYETLSDPSAR
Sbjct: 41  LYEVLRIKQNASAVEIKSAYRNLAKVYHPDSALRRSE-SDERDFIEIHDAYETLSDPSAR 99

Query: 438 AMYDLSLTAAHGGKYRRFPSPL-TQNRYSGF-YTTRRWETDQCW 563
           A+YDLSL AA     R F S +   N  SGF Y TR+WETDQCW
Sbjct: 100 ALYDLSLMAARDDN-RSFSSLVAAPNGSSGFYYQTRKWETDQCW 142


>ref|XP_002300579.1| predicted protein [Populus trichocarpa] gi|222847837|gb|EEE85384.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score =  121 bits (304), Expect = 2e-25
 Identities = 64/103 (62%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = +3

Query: 258 LYEVLRVEHDASPTEIKSAYRSLAKLYHPDAAAKRSPLNDDG-DFIEIRNAYETLSDPSA 434
           LYE+LRV   AS  EIK+AYRSLAK+YHPDA   R     +G DFIEI NAYETLSDP+A
Sbjct: 2   LYEILRVNPTASQVEIKTAYRSLAKVYHPDAMLDRDDEPSEGVDFIEIHNAYETLSDPAA 61

Query: 435 RAMYDLSLTAAHGGKYRRFPSPLTQNRYSGFYTTRRWETDQCW 563
           RA+YD+SL+AA    YRR           G+YTTRRWETDQCW
Sbjct: 62  RAVYDMSLSAAARDFYRR-----AVGYSGGYYTTRRWETDQCW 99


Top