BLASTX nr result

ID: Glycyrrhiza23_contig00012502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012502
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-li...   197   6e-49
gb|AFK45442.1| unknown [Medicago truncatula]                          195   3e-48
gb|ACJ85598.1| unknown [Medicago truncatula]                          195   3e-48
ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated...   194   5e-48
ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated...   192   2e-47

>ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355482337|gb|AES63540.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 555

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/104 (91%), Positives = 99/104 (95%)
 Frame = +1

Query: 1   VKARVDKIGPLVGREEKSLEAFEVSPDSQTIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 180
           VKARVDKIGPL+GREEKS+E FEVSPDSQ IAFVGNEGYILLVSTKSKQLVGTLKMNGTV
Sbjct: 327 VKARVDKIGPLLGREEKSIEVFEVSPDSQLIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 386

Query: 181 RSLAFAEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINST 312
           RSLAF EDGQKLLSAGGDG +YHWDLRTRTCIHKGVDEGC+N T
Sbjct: 387 RSLAFTEDGQKLLSAGGDGHIYHWDLRTRTCIHKGVDEGCLNGT 430


>gb|AFK45442.1| unknown [Medicago truncatula]
          Length = 555

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/104 (90%), Positives = 98/104 (94%)
 Frame = +1

Query: 1   VKARVDKIGPLVGREEKSLEAFEVSPDSQTIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 180
           VKARVDKIGPL+GREEKS+E FEVSPDSQ IAFVGNEGYILLVSTKSKQLVGTLKMNGTV
Sbjct: 327 VKARVDKIGPLLGREEKSIEVFEVSPDSQLIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 386

Query: 181 RSLAFAEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINST 312
           RSLAF EDGQKLLSA GDG +YHWDLRTRTCIHKGVDEGC+N T
Sbjct: 387 RSLAFTEDGQKLLSAAGDGHIYHWDLRTRTCIHKGVDEGCLNGT 430


>gb|ACJ85598.1| unknown [Medicago truncatula]
          Length = 555

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/104 (90%), Positives = 98/104 (94%)
 Frame = +1

Query: 1   VKARVDKIGPLVGREEKSLEAFEVSPDSQTIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 180
           VKARVDKIGPL+GREEKS+E FEVSPDSQ IAFVGNEGYILLVSTKSKQLVGTLKMNGTV
Sbjct: 327 VKARVDKIGPLLGREEKSIEVFEVSPDSQLIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 386

Query: 181 RSLAFAEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINST 312
           RSLAF EDGQKLLSA GDG +YHWDLRTRTCIHKGVDEGC+N T
Sbjct: 387 RSLAFTEDGQKLLSAAGDGHIYHWDLRTRTCIHKGVDEGCLNGT 430


>ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Glycine max]
          Length = 551

 Score =  194 bits (494), Expect = 5e-48
 Identities = 94/104 (90%), Positives = 98/104 (94%)
 Frame = +1

Query: 1   VKARVDKIGPLVGREEKSLEAFEVSPDSQTIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 180
           VKARVDKIGPLVGREEKSLE FEVSPDSQ IAF GNEGYILLVSTK+KQLVGTLKMNGT+
Sbjct: 323 VKARVDKIGPLVGREEKSLEVFEVSPDSQMIAFTGNEGYILLVSTKTKQLVGTLKMNGTI 382

Query: 181 RSLAFAEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINST 312
           RSLAFAE+GQKLLS GGDGQVYHWDLRT TC+HKGVDEGCIN T
Sbjct: 383 RSLAFAENGQKLLSGGGDGQVYHWDLRTMTCLHKGVDEGCINGT 426


>ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Cucumis sativus] gi|449521663|ref|XP_004167849.1|
           PREDICTED: U3 small nucleolar RNA-associated protein 18
           homolog [Cucumis sativus]
          Length = 564

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/104 (86%), Positives = 101/104 (97%)
 Frame = +1

Query: 1   VKARVDKIGPLVGREEKSLEAFEVSPDSQTIAFVGNEGYILLVSTKSKQLVGTLKMNGTV 180
           VKA+VDKIGPLVGREEKSLEAFE+SPDS TIAF+GNEGYILLVSTK+K+L+GTLKMNGTV
Sbjct: 337 VKAKVDKIGPLVGREEKSLEAFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTV 396

Query: 181 RSLAFAEDGQKLLSAGGDGQVYHWDLRTRTCIHKGVDEGCINST 312
           RSLAFA+DG++LLS+GGDGQ+YHWDLRTRTCIHK VDEGCIN T
Sbjct: 397 RSLAFADDGRQLLSSGGDGQIYHWDLRTRTCIHKAVDEGCINGT 440


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