BLASTX nr result

ID: Glycyrrhiza23_contig00012448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012448
         (1374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241945.1| uncharacterized protein LOC100818448 [Glycin...   577   e-162
ref|XP_003546289.1| PREDICTED: uncharacterized protein LOC100780...   549   e-154
ref|XP_003597796.1| DNA repair protein XRCC1 [Medicago truncatul...   526   e-147
ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266...   399   e-109
ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106

>ref|NP_001241945.1| uncharacterized protein LOC100818448 [Glycine max]
            gi|255638851|gb|ACU19729.1| unknown [Glycine max]
          Length = 382

 Score =  577 bits (1486), Expect = e-162
 Identities = 295/387 (76%), Positives = 327/387 (84%), Gaps = 15/387 (3%)
 Frame = +3

Query: 111  MSGTKTSANNNKGSKRNLPSWTSSRENKEDQNCGKKPTLDGEGEKD------NKGKVQTE 272
            MS TK SANN+ GSKR+LPSWT+SREN+ D N  KKPTLDG+GEK       NK KVQ E
Sbjct: 1    MSDTKRSANNS-GSKRSLPSWTNSRENESD-NSAKKPTLDGQGEKSSDAETPNKSKVQNE 58

Query: 273  NGGRSSASSSLEPKGFNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEYQPDWNSDCTLL 452
            NGG +S   SLE K FNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEY+PDWNSDCTLL
Sbjct: 59   NGGNAS---SLESKSFNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEYKPDWNSDCTLL 115

Query: 453  VCAFPNTPKFRQVQADCGTIVSKDWIVECYTQRKLIEIESYLMHAGKPWRKGSISHEVNE 632
            VCAFPNTPKFRQV+ADCGTIVSKDWI+ECYTQRKLIEI+SYL+HAGKPWRKG+ S EVNE
Sbjct: 116  VCAFPNTPKFRQVEADCGTIVSKDWIIECYTQRKLIEIDSYLLHAGKPWRKGNGSLEVNE 175

Query: 633  EQKPSLPKESPKHVERELPSKPTTSIKSKGKDTGGARKCFEPSEVKKWAVDDLNKTIQWL 812
            ++KPS+PK+  KHVERE PS  T SIKSKGKDT  ARKCFEPSEVKKWA+DDLN+TIQWL
Sbjct: 176  DKKPSVPKKLLKHVEREQPSASTASIKSKGKDTDVARKCFEPSEVKKWAIDDLNETIQWL 235

Query: 813  ESQEEKPDSSEITKIAAEGILTCLEDAICSLTEKQDIRKGTEDWKFLPRVVDELAKLG-- 986
            ESQEEKPD  E+TKIAAEGILTCL+DAICSL EKQDIRKGTEDW FLPRVV+ELAK    
Sbjct: 236  ESQEEKPDPGELTKIAAEGILTCLQDAICSLEEKQDIRKGTEDWMFLPRVVEELAKFDVV 295

Query: 987  DDKASMSKEDLHKQALDWKRIYEAELNRLDDELTKNSKMNEGGRSKKGRT-------MEY 1145
             +K S+SKEDL +QALD KRIYE ELN LD E  KNSK+N+  RSK GRT       +EY
Sbjct: 296  GNKGSLSKEDLRRQALDCKRIYEEELNSLDHERKKNSKVNKEQRSKTGRTNAMSSGAVEY 355

Query: 1146 DSDDTIEMTEQEIDLAYKTISSNMCHV 1226
            DSD+TIEMTEQEID+AYK +SSN+CH+
Sbjct: 356  DSDETIEMTEQEIDIAYKALSSNICHL 382


>ref|XP_003546289.1| PREDICTED: uncharacterized protein LOC100780160 [Glycine max]
          Length = 384

 Score =  549 bits (1415), Expect = e-154
 Identities = 284/387 (73%), Positives = 321/387 (82%), Gaps = 15/387 (3%)
 Frame = +3

Query: 111  MSGTKTSANNNKGSKRNLPSWTSSRENKEDQNCGKKPTLDGEGEK------DNKGKVQTE 272
            MS T  SANNN GSKR+LPS TS+REN E +N  KKP LDG+GEK       NK KVQ +
Sbjct: 1    MSDTGRSANNN-GSKRSLPSCTSAREN-ESENSAKKPNLDGKGEKFGEAETPNKSKVQNQ 58

Query: 273  NGGRSSASSSLEPKGFNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEYQPDWNSDCTLL 452
            NGG+SSAS  LE K FNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEY+PDWNSDCTLL
Sbjct: 59   NGGKSSASC-LESKSFNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEYKPDWNSDCTLL 117

Query: 453  VCAFPNTPKFRQVQADCGTIVSKDWIVECYTQRKLIEIESYLMHAGKPWRKGSISHEVNE 632
            VCAFPNTPKFRQV+ADCGTIVSK WI+ECYTQRKLIEI+SYL+HAGKPW KG+ S EVNE
Sbjct: 118  VCAFPNTPKFRQVEADCGTIVSKVWIIECYTQRKLIEIDSYLLHAGKPWCKGNGSIEVNE 177

Query: 633  EQKPSLPKESPKHVERELPSKPTTSIKSKGKDTGGARKCFEPSEVKKWAVDDLNKTIQWL 812
            ++KPS+PK+SPKH+ERE  S  T S+KSKGKD   ARKCFEP EVKKW +DDLNKTIQWL
Sbjct: 178  DKKPSVPKKSPKHIEREQLSTSTASLKSKGKDPDVARKCFEPLEVKKWVIDDLNKTIQWL 237

Query: 813  ESQEEKPDSSEITKIAAEGILTCLEDAICSLTEKQDIRKGTEDWKFLPRVVDELAK--LG 986
            E+QEEKPD SE+TKIAAEGILTCL+DAICSL EKQDIRKGTEDW FLPRVV+ELAK  + 
Sbjct: 238  ENQEEKPDPSELTKIAAEGILTCLQDAICSLEEKQDIRKGTEDWMFLPRVVEELAKFDVE 297

Query: 987  DDKASMSKEDLHKQALDWKRIYEAELNRLDDELTKNSKMNEGGRSKKGRT-------MEY 1145
             +K S+ KE+L ++ALD KRIYE ELN LD E   N+K+N+   SK  RT       +EY
Sbjct: 298  GNKGSLLKEELQRRALDCKRIYEEELNGLDHERKTNTKVNKEQTSKTRRTNAMSSGAVEY 357

Query: 1146 DSDDTIEMTEQEIDLAYKTISSNMCHV 1226
            DSD+TIEMTEQEIDLAYKT+SSN+CH+
Sbjct: 358  DSDETIEMTEQEIDLAYKTLSSNICHL 384


>ref|XP_003597796.1| DNA repair protein XRCC1 [Medicago truncatula]
            gi|355486844|gb|AES68047.1| DNA repair protein XRCC1
            [Medicago truncatula]
          Length = 553

 Score =  526 bits (1354), Expect = e-147
 Identities = 268/365 (73%), Positives = 302/365 (82%), Gaps = 11/365 (3%)
 Frame = +3

Query: 150  SKRNLPSWTSSRENKEDQNCGKKPTLDGEGEKDNKGKVQTENGGRSSASSSLEPKGFNKL 329
            SKRNLPSW +S ++    N GK+PTLD  GEK +      E G  +  +       FNKL
Sbjct: 3    SKRNLPSWMTSNDDDGHGNFGKRPTLDEGGEKSS------EIGTSNKKTKVENENAFNKL 56

Query: 330  LEGVVFVLSGFVNPERGMLRSRAMEMGAEYQPDWNSDCTLLVCAFPNTPKFRQVQADCGT 509
            +EGVVFVLSGFVNPERG+LRSRAMEMGAE++ DWNS+CTLLVCAFPNTPKFRQV+ADCGT
Sbjct: 57   MEGVVFVLSGFVNPERGILRSRAMEMGAEFKQDWNSNCTLLVCAFPNTPKFRQVEADCGT 116

Query: 510  IVSKDWIVECYTQRKLIEIESYLMHAGKPWRKGSISHEVNEEQKPSLPKESPKHVERELP 689
            IVS+DWI ECY QRKL+EI+SYLMHAGKPWR G  SHEV+EEQKPS+P +  K VERE  
Sbjct: 117  IVSEDWIQECYRQRKLVEIDSYLMHAGKPWRNGGRSHEVDEEQKPSVPHKPQKRVERE-T 175

Query: 690  SKPTTSIKSKGKDTGGARKCFEPSEVKKWAVDDLNKTIQWLESQEEKPDSSEITKIAAEG 869
            S+ TTSIKSKGKDT  ARKCFEPSEVKKWA+DDLNKTIQWLESQEEKPD +EITKIAAEG
Sbjct: 176  SEATTSIKSKGKDTDDARKCFEPSEVKKWALDDLNKTIQWLESQEEKPDPNEITKIAAEG 235

Query: 870  ILTCLEDAICSLTEKQDIRKGTEDWKFLPRVVDELAKL---GDDKASMSKEDLHKQALDW 1040
            ILTCL+DAICS+ EKQDI +GTEDWKFLPRVV+ELA+L   G++KASMSKED+HKQALD 
Sbjct: 236  ILTCLQDAICSIEEKQDIGRGTEDWKFLPRVVEELARLYVVGNNKASMSKEDIHKQALDC 295

Query: 1041 KRIYEAELNRLDDELTKNSKMNEGGRSKKGRT--------MEYDSDDTIEMTEQEIDLAY 1196
            KRIYE ELNRLD ELTK SK+NE  RSK+GRT        +EYDSDDTIEMTEQEIDLAY
Sbjct: 296  KRIYEEELNRLDHELTKKSKINEEHRSKRGRTNDASSSGAVEYDSDDTIEMTEQEIDLAY 355

Query: 1197 KTISS 1211
            KT+SS
Sbjct: 356  KTLSS 360


>ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266851 [Vitis vinifera]
          Length = 389

 Score =  399 bits (1026), Expect = e-109
 Identities = 216/394 (54%), Positives = 274/394 (69%), Gaps = 24/394 (6%)
 Frame = +3

Query: 111  MSGTKTSANN--NKGSKRNLPSWTSSRENKEDQNCGKKPTLDGEGEKDNKGKVQTE---- 272
            MS +K+S  +  NK  KR+LPSW S  EN      GK+   DG G+++ K   + E    
Sbjct: 1    MSDSKSSRGDGANKTVKRSLPSWMSDIENGSKAR-GKRSG-DGGGQEERKEGEKPEQAKG 58

Query: 273  NGGRSS---ASSSLEPKGFNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEYQPDWNSDC 443
            NGG+S+    +S+L    F+ LLEGVVFVLSGFVNPER  LRS+A+EMGAEYQPDWNS+C
Sbjct: 59   NGGKSNNRPGASNLSTSNFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNC 118

Query: 444  TLLVCAFPNTPKFRQVQADCGTIVSKDWIVECYTQRKLIEIESYLMHAGKPWRKGSISHE 623
            TLLVCAFPNTPKFRQV+ADCGTIVSK+W+ ECY Q+KL +IE YLMHAGKPWR+ ++ H+
Sbjct: 119  TLLVCAFPNTPKFRQVEADCGTIVSKEWLSECYNQKKLADIEIYLMHAGKPWRRSNVPHQ 178

Query: 624  VNE--EQKPSLPKESPKHVERELPSKPTTSIKSKGKDTGGARKCFEPSEVKKWAVDDLNK 797
                 +++ S P  S   VER L SK T S       +  A+  F PSEVKKWA+DDL+K
Sbjct: 179  AKNVADEEASPPSNSKMQVERGLRSKLTAS----KSGSNPAKDLFSPSEVKKWAIDDLHK 234

Query: 798  TIQWLESQEEKPDSSEITKIAAEGILTCLEDAICSLTEKQDIRKGTEDWKFLPRVVDELA 977
            TI WL+SQEEKP+ SEI KIAA GILTCL+DAI SL +KQDI + T++W F+PRVV+EL 
Sbjct: 235  TISWLDSQEEKPEPSEIKKIAAGGILTCLQDAIDSLGQKQDILEMTKEWNFIPRVVEELV 294

Query: 978  KLGDDK---ASMSKEDLHKQALDWKRIYEAELNRLDDELTKNSKMNEGGRSKKGR----- 1133
            KL   +   +S+SK DL+K A+  K IYEAE + LDD+   N K  + GR +KG+     
Sbjct: 295  KLESTRNSHSSLSKADLYKHAITCKEIYEAEFSSLDDDALANKKQPKTGRGEKGKKKMTK 354

Query: 1134 -----TMEYDSDDTIEMTEQEIDLAYKTISSNMC 1220
                    YDSD+T+EMTE+EIDLAY T++S +C
Sbjct: 355  ATSSNAAGYDSDETVEMTEEEIDLAYNTVASAIC 388


>ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|222846889|gb|EEE84436.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  389 bits (1000), Expect = e-106
 Identities = 200/371 (53%), Positives = 261/371 (70%), Gaps = 4/371 (1%)
 Frame = +3

Query: 111  MSGTKTSANNNKGSKRNLPSWTSSRENKEDQNCGKKPTLDGEGEKDNKGKVQTENGGRSS 290
            MS +K S       KRNLPSW SS++N                        + ++ G+ +
Sbjct: 1    MSDSKRSGGGGSSKKRNLPSWMSSKDN------------------------ENKSHGKKA 36

Query: 291  ASSSLEPKGFNKLLEGVVFVLSGFVNPERGMLRSRAMEMGAEYQPDWNSDCTLLVCAFPN 470
            A++S E +  +KLL+GVVFVLSGFVNPER  LRS+A+EMGAEY+PDW SDCTLLVCA+ N
Sbjct: 37   AATSAEDEQ-SKLLDGVVFVLSGFVNPERATLRSQALEMGAEYRPDWTSDCTLLVCAYSN 95

Query: 471  TPKFRQVQADCGTIVSKDWIVECYTQRKLIEIESYLMHAGKPWRKGSISHEVNEEQKPSL 650
            TPKFRQV+ADCGTIV K+WI+ECY+Q+KL+EI+SYLMHAGKPWRK +ISHE   +QK S 
Sbjct: 96   TPKFRQVEADCGTIVKKEWILECYSQKKLVEIDSYLMHAGKPWRKSNISHERGSDQKASP 155

Query: 651  PKESPKHVERELPSKPTTSIKSKGKDTGGARKCFEPSEVKKWAVDDLNKTIQWLESQEEK 830
            P++S K V+  L SKPT S   K + +  +++CF PS+VK+W +DDLN+TI WLESQEEK
Sbjct: 156  PRKSDKQVKSGLHSKPTASTSYKVRASNPSKECFSPSKVKEWVIDDLNRTISWLESQEEK 215

Query: 831  PDSSEITKIAAEGILTCLEDAICSLTEKQDIRKGTEDWKFLPRVVDELAKL---GDDKAS 1001
            P+ SEI +IAAEGIL CL+DAI  L + QD+RK T+ W  +P  V+E+ KL   G+  +S
Sbjct: 216  PEPSEIKQIAAEGILICLQDAIDFLEQNQDVRKITDQWNVVPHAVEEMVKLVDGGNASSS 275

Query: 1002 MSKEDLHKQALDWKRIYEAELNRLDDELTKNSKMNEGGRSKKGR-TMEYDSDDTIEMTEQ 1178
            +SKEDL ++A   K IYEAEL+ LD           G +SKK R   EYDSD+TIEMT++
Sbjct: 276  LSKEDLCRKAKACKEIYEAELSSLD-----------GSKSKKQRLKTEYDSDETIEMTKE 324

Query: 1179 EIDLAYKTISS 1211
            E+D+AY T++S
Sbjct: 325  EVDMAYNTVAS 335


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