BLASTX nr result

ID: Glycyrrhiza23_contig00012445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012445
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588487.1| WD repeat-containing protein [Medicago trunc...   128   2e-27
ref|XP_003522540.1| PREDICTED: uncharacterized protein LOC100807...   117   4e-24
ref|XP_003527990.1| PREDICTED: uncharacterized protein LOC100817...   117   7e-24
ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-20
ref|XP_004145945.1| PREDICTED: WD repeat-containing protein 44-l...   105   3e-20

>ref|XP_003588487.1| WD repeat-containing protein [Medicago truncatula]
            gi|358344639|ref|XP_003636395.1| WD repeat-containing
            protein [Medicago truncatula] gi|355477535|gb|AES58738.1|
            WD repeat-containing protein [Medicago truncatula]
            gi|355502330|gb|AES83533.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 784

 Score =  128 bits (322), Expect(2) = 2e-27
 Identities = 66/109 (60%), Positives = 79/109 (72%)
 Frame = -2

Query: 1115 WPEEKLPISSPKVRKSAIHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGL 936
            +PEEKLP SSPK +KS++HKS YKFLKSSCKSTS+CHAWGLVIVTAGWDGRIKSFHNYGL
Sbjct: 646  YPEEKLPTSSPKSKKSSLHKSAYKFLKSSCKSTSNCHAWGLVIVTAGWDGRIKSFHNYGL 705

Query: 935  PVIV*K*SGLF*DWIIESNAFIALLGHIALGKLHAAADVL*DLKVMVQV 789
            P            + +  ++ + LL H+ LGKL  AA+VL D +    V
Sbjct: 706  PT-----------YEVSFSSIMDLLRHVVLGKL-LAANVLQDSEATFNV 742



 Score = 21.2 bits (43), Expect(2) = 2e-27
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 777 ITEQVEVRGQTPKGIA 730
           ITEQ  V+GQT K  A
Sbjct: 748 ITEQAAVKGQTLKKTA 763


>ref|XP_003522540.1| PREDICTED: uncharacterized protein LOC100807177 [Glycine max]
          Length = 703

 Score =  117 bits (294), Expect = 4e-24
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = -2

Query: 1115 WPEEKLPISSPKVRKSAIHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGL 936
            WPEEKLP+SSPK + S + KS YKFLKSSCKSTSS HAWG+VIVTAGWDGRIKSFHNYGL
Sbjct: 640  WPEEKLPVSSPKAKTSVMRKSEYKFLKSSCKSTSSAHAWGMVIVTAGWDGRIKSFHNYGL 699

Query: 935  PVI 927
            P++
Sbjct: 700  PIL 702


>ref|XP_003527990.1| PREDICTED: uncharacterized protein LOC100817209 [Glycine max]
          Length = 701

 Score =  117 bits (292), Expect = 7e-24
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = -2

Query: 1115 WPEEKLPISSPKVRKSAIHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGL 936
            WPEEKLP+SSPK + S + KS YKFLKSSCKSTSS HAWG+VIVTAGWDGRIKSFHNYGL
Sbjct: 638  WPEEKLPVSSPKAKASVMRKSEYKFLKSSCKSTSSAHAWGMVIVTAGWDGRIKSFHNYGL 697

Query: 935  PV 930
            P+
Sbjct: 698  PI 699


>ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|222868384|gb|EEF05515.1|
            predicted protein [Populus trichocarpa]
          Length = 726

 Score =  105 bits (263), Expect = 2e-20
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -2

Query: 1115 WPEEKLPISSPKVRKSAIHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGL 936
            WPEEKLP SSP    S +HKS YKFLK+SC+ST++ HAWGLVIVTAGWDGRIKSFHNYGL
Sbjct: 664  WPEEKLP-SSPLSASSTMHKSQYKFLKNSCQSTAASHAWGLVIVTAGWDGRIKSFHNYGL 722

Query: 935  PV 930
            PV
Sbjct: 723  PV 724


>ref|XP_004145945.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
            gi|449528491|ref|XP_004171238.1| PREDICTED: WD
            repeat-containing protein 44-like [Cucumis sativus]
          Length = 720

 Score =  105 bits (261), Expect = 3e-20
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -2

Query: 1115 WPEEKLPISSPKVRKSAIHKSVYKFLKSSCKSTSSCHAWGLVIVTAGWDGRIKSFHNYGL 936
            WPEEKLP SS   + S +HKS YKFLK SC++TSS HAWGLVIVTAGWDGRI+SFHNYGL
Sbjct: 657  WPEEKLPTSSLLPKPSMMHKSRYKFLKLSCQNTSSSHAWGLVIVTAGWDGRIRSFHNYGL 716

Query: 935  PV 930
            PV
Sbjct: 717  PV 718


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