BLASTX nr result

ID: Glycyrrhiza23_contig00012415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012415
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48577.1| unknown [Medicago truncatula]                           98   8e-19
ref|XP_003618007.1| Zinc finger RNA-binding protein [Medicago tr...    98   8e-19
ref|XP_002281421.1| PREDICTED: uncharacterized protein LOC100251...    82   3e-14
emb|CAN78532.1| hypothetical protein VITISV_035305 [Vitis vinifera]    82   3e-14
ref|XP_002526086.1| hypothetical protein RCOM_0524640 [Ricinus c...    64   2e-08

>gb|AFK48577.1| unknown [Medicago truncatula]
          Length = 532

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = +1

Query: 4   LVSGNGIGPCITGFKRHGIGFQKKAPNKIKVAQSAWCEVCKINCNSRDMYIAHLAGKKHL 183
           L S +GIGP I   KR G    +KA  KIKVA+S WCE CKINCNSRD Y AH++GKKHL
Sbjct: 370 LKSNDGIGPSIAELKRKGDAPIEKAAKKIKVAESVWCEFCKINCNSRDSYTAHISGKKHL 429

Query: 184 KNMEKLSKPKI 216
           +N+EKLS PK+
Sbjct: 430 RNLEKLSNPKV 440


>ref|XP_003618007.1| Zinc finger RNA-binding protein [Medicago truncatula]
           gi|355519342|gb|AET00966.1| Zinc finger RNA-binding
           protein [Medicago truncatula]
          Length = 532

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = +1

Query: 4   LVSGNGIGPCITGFKRHGIGFQKKAPNKIKVAQSAWCEVCKINCNSRDMYIAHLAGKKHL 183
           L S +GIGP I   KR G    +KA  KIKVA+S WCE CKINCNSRD Y AH++GKKHL
Sbjct: 370 LKSNDGIGPSIAELKRKGDAPIEKAAKKIKVAESVWCEFCKINCNSRDSYTAHISGKKHL 429

Query: 184 KNMEKLSKPKI 216
           +N+EKLS PK+
Sbjct: 430 RNLEKLSNPKV 440


>ref|XP_002281421.1| PREDICTED: uncharacterized protein LOC100251937 [Vitis vinifera]
           gi|297733915|emb|CBI15162.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = +1

Query: 19  GIGPCITGFKRHGIGFQKKAPNKIKVAQSAWCEVCKINCNSRDMYIAHLAGKKHLKNMEK 198
           G+ P     + H  G   KAP K K  QSAWCEVCKINCNS D++  H+ GKKHLKN+EK
Sbjct: 253 GLRPQHLVVQPHSNGIWSKAPKKPKFVQSAWCEVCKINCNSSDVFTKHILGKKHLKNLEK 312

Query: 199 LSKPK 213
           L++PK
Sbjct: 313 LAEPK 317


>emb|CAN78532.1| hypothetical protein VITISV_035305 [Vitis vinifera]
          Length = 1164

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = +1

Query: 19  GIGPCITGFKRHGIGFQKKAPNKIKVAQSAWCEVCKINCNSRDMYIAHLAGKKHLKNMEK 198
           G+ P     + H  G   KAP K K  QSAWCEVCKINCNS D++  H+ GKKHLKN+EK
Sbjct: 460 GLRPQHLVVQPHSNGIWSKAPKKPKFVQSAWCEVCKINCNSSDVFTKHILGKKHLKNLEK 519

Query: 199 LSKPK 213
           L++PK
Sbjct: 520 LAEPK 524


>ref|XP_002526086.1| hypothetical protein RCOM_0524640 [Ricinus communis]
           gi|223534583|gb|EEF36280.1| hypothetical protein
           RCOM_0524640 [Ricinus communis]
          Length = 171

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +1

Query: 43  FKRHGIGFQKKAPNKIKVAQSAWCEVCKINCNSRDMYIAHLAGKKHLKNMEKLSK 207
           F+  G G   K   KIKV QSA+CEVCK++CNS+++   H  GKKH KN+E+L +
Sbjct: 16  FQIQGNGILNKRQKKIKVVQSAYCEVCKVDCNSKEVLDQHKLGKKHKKNVERLQQ 70


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