BLASTX nr result

ID: Glycyrrhiza23_contig00012407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012407
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2,...    75   8e-12
ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,...    74   2e-11
ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc...    72   9e-11
ref|XP_003599019.1| Pentatricopeptide repeat-containing protein ...    72   1e-10

>ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Glycine max]
          Length = 471

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 34/47 (72%), Positives = 38/47 (80%)
 Frame = -2

Query: 143 TMMARILKDYVGRESTFYFVERWMEHYKKPNGEGTDIYMKREELNHT 3
           T +A ILKDYVGRES  YF ER  EHYK+PNGEG  IY+KRE+LNHT
Sbjct: 116 TELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHT 162


>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Glycine max]
          Length = 479

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = -2

Query: 137 MARILKDYVGRESTFYFVERWMEHYKKPNGEGTDIYMKREELNHT 3
           +A ILKDYVGRES  YF ER  EHYK+PNGEG  IY+KRE+LNHT
Sbjct: 126 LAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHT 170


>ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/59 (64%), Positives = 43/59 (72%)
 Frame = -2

Query: 308 KDVASCKSIHSYGVRRYNCGVGPNSLPAMYSKCGEEYLAHRIFDRMLVYNVITWLTMMA 132
           +DV SCKSIH Y VRR   GV  NSL  MYSKCGE  LAH+IFD+M V + I+W TMMA
Sbjct: 243 EDVDSCKSIHGYVVRRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMA 301


>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
          Length = 474

 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = -2

Query: 128 ILKDYVGRESTFYFVERWMEHYKKPNGEGTDIYMKREELNHT 3
           ILKDYVGRE+  YF ER  EHYK+PNGEG  IY+KRE+LNHT
Sbjct: 124 ILKDYVGRETPLYFAERLTEHYKRPNGEGPQIYLKREDLNHT 165


>ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355488067|gb|AES69270.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 944

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = -2

Query: 305 DVASCKSIHSYGVRRYNCGVGPNSLPAMYSKCGEEYLAHRIFDRMLVYNVITWLTMMARI 126
           DV  CKSIH Y VRR  CGV  NSL  MY KCG+ + A R+FDRM V + ++W TMMA  
Sbjct: 215 DVGCCKSIHGYVVRRSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGY 274

Query: 125 LKD 117
           +K+
Sbjct: 275 VKN 277


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