BLASTX nr result
ID: Glycyrrhiza23_contig00012379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00012379
(1978 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 849 0.0
ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containi... 766 0.0
ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containi... 757 0.0
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 748 0.0
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 746 0.0
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 849 bits (2194), Expect = 0.0
Identities = 420/543 (77%), Positives = 472/543 (86%)
Frame = -1
Query: 1900 NNKEHARFTTPTPSETTRPQVVQNYNFGDTHFMKVLNRSCKTGKYNESLYFLQHMVNKGY 1721
NN E +F +ET + Q+Y+F DT+FMK LNRSCK+ KY+ESLYFLQHMVN+GY
Sbjct: 52 NNNEQQQFRV---NETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGY 108
Query: 1720 KPDVILCTKLIKGFFNSKRIDKAIQVMEVLEKHGDPDVFAYNAVISGFCKADRIDAANKV 1541
KPDVILCTKLIKGFFN K+I+KAIQVME+LEKHG PDVFAYNAVISGFCKADR+D A+KV
Sbjct: 109 KPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKV 168
Query: 1540 LDRMKKRGFSPDVVTYNILIGNLCGKGKLDLALRVMDQLLKDNCKPTVITYTILIEATII 1361
LDRMKKRGF PDVVTYNILIGN CG+G+LDLALRVMDQLLKDNCKPTVITYTILIEATI
Sbjct: 169 LDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATIT 228
Query: 1360 EGGIDEAMKLLDEMLSRGLQPDMYTYNVIVKGMCREGLVDRAFEFVSSISDKGCAAGVSS 1181
+GGIDEAMKLLDEMLSRGL+PD YTYNV+V GMC+EG++DRAFEF+S IS GC AGVS+
Sbjct: 229 QGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVST 288
Query: 1180 YNILLRGLLNEGKWEAVERLINDMFAKGCEPNVVTYSTLIGSLCRDGRIVEAKNVLKVMK 1001
YNILLR LLNEGKWE E+L++DM KGCEPN +TYSTLI +LCRDG+I EAKNVLKVMK
Sbjct: 289 YNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMK 348
Query: 1000 EKGLTPDSYSYDPLISAFCREGRVDLAIEFMVNMIADGCLPDVFSYNRILASLCKNGNAD 821
EK L PD YSYDPLISA CREG+VDLAIEF+ +MI+ G LPD+ SYN ILASLCKNGNAD
Sbjct: 349 EKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNAD 408
Query: 820 EALSIFEKLGEVGCPLDASSYNTMLGALWSSGDKTRALGMVLKMLSNGVDPDGITYNSLI 641
EAL+IFEKLGEVGCP +A SYNT+ GALWSSGDK RALGM+L+MLSNG+DPD ITYNSLI
Sbjct: 409 EALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLI 468
Query: 640 SCLCRDGMVDEAIELLVDMLEMGSGSRCKPTVISYNIVLLGLCKVHRIVDAIEVLAAMVD 461
SCLCRDG+VD+AIELLVDM E +C+PTVISYN VLLGLCKV RI+DAIEVLAAMV+
Sbjct: 469 SCLCRDGLVDQAIELLVDMFE---SEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN 525
Query: 460 KGCRPNETSYTLLIQGIGFAGWPNDAMELASSLVSMGAISEYSFNRLNKTFPVLDVYKEL 281
+GC PNET+YTLLIQGIGFAGW DAMELA+ LV+M AISE SF R K FPV D +KEL
Sbjct: 526 EGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAISEDSFKRFQKIFPVFDAHKEL 585
Query: 280 AFS 272
A S
Sbjct: 586 ALS 588
>ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 766 bits (1978), Expect = 0.0
Identities = 387/555 (69%), Positives = 454/555 (81%)
Frame = -1
Query: 1978 TIVTCTILHLKDEXXXXXXXXXXXXSNNKEHARFTTPTPSETTRPQVVQNYNFGDTHFMK 1799
T++TC I L ++ NNK H R T S TRPQ Q+Y+F DTH MK
Sbjct: 30 TVITCRIPLLNEDNPSKRRLNNNN--NNKGHTRVT----SSDTRPQQ-QHYDFRDTHHMK 82
Query: 1798 VLNRSCKTGKYNESLYFLQHMVNKGYKPDVILCTKLIKGFFNSKRIDKAIQVMEVLEKHG 1619
LNR CKTGKY E+LYFL+ MV +GYKPDVILCTKLIKG F SKR +KA++VME+LE++G
Sbjct: 83 ALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG 142
Query: 1618 DPDVFAYNAVISGFCKADRIDAANKVLDRMKKRGFSPDVVTYNILIGNLCGKGKLDLALR 1439
DPD FAYNAVISGFC++DR DAAN+V+ RMK RGFSPDVVTYNILIG+LC +GKLDLAL+
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202
Query: 1438 VMDQLLKDNCKPTVITYTILIEATIIEGGIDEAMKLLDEMLSRGLQPDMYTYNVIVKGMC 1259
VMDQLL+DNC PTVITYTILIEATII G ID+AM+LLDEM+SRGLQPDMYTYNVIV+GMC
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262
Query: 1258 REGLVDRAFEFVSSISDKGCAAGVSSYNILLRGLLNEGKWEAVERLINDMFAKGCEPNVV 1079
+ GLVDRAFEFVS+++ ++ YN+LL+GLLNEG+WEA ERL++DM KGCEPN+V
Sbjct: 263 KRGLVDRAFEFVSNLN---TTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319
Query: 1078 TYSTLIGSLCRDGRIVEAKNVLKVMKEKGLTPDSYSYDPLISAFCREGRVDLAIEFMVNM 899
TYS LI SLCRDG+ EA +VL+VMKEKGL PD+Y YDPLISAFC+EG+VDLAI F+ +M
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM 379
Query: 898 IADGCLPDVFSYNRILASLCKNGNADEALSIFEKLGEVGCPLDASSYNTMLGALWSSGDK 719
I+ G LPD+ +YN I+ SLCK G ADEAL+IF+KL EVGCP +ASSYNTM GALWSSGDK
Sbjct: 380 ISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDK 439
Query: 718 TRALGMVLKMLSNGVDPDGITYNSLISCLCRDGMVDEAIELLVDMLEMGSGSRCKPTVIS 539
RAL M+L+MLSNGVDPD ITYNSLIS LCRDGMVDEAI LLVDM + +PTVIS
Sbjct: 440 IRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDM----ERTEWQPTVIS 495
Query: 538 YNIVLLGLCKVHRIVDAIEVLAAMVDKGCRPNETSYTLLIQGIGFAGWPNDAMELASSLV 359
YNIVLLGLCK HRIVDAIEVLA MVD GC+PNET+YTLL++G+G+AGW + A+ELA SLV
Sbjct: 496 YNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLV 555
Query: 358 SMGAISEYSFNRLNK 314
SM AIS+ F RL K
Sbjct: 556 SMNAISQDLFRRLQK 570
>ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 757 bits (1955), Expect = 0.0
Identities = 375/533 (70%), Positives = 442/533 (82%)
Frame = -1
Query: 1867 TPSETTRPQVVQNYNFGDTHFMKVLNRSCKTGKYNESLYFLQHMVNKGYKPDVILCTKLI 1688
T S ++PQ +F DTH +K L+RSCK G +NESLYFL+H+VNKG+KPDV+LCTKLI
Sbjct: 41 TLSSVSKPQT-HTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLI 99
Query: 1687 KGFFNSKRIDKAIQVMEVLEKHGDPDVFAYNAVISGFCKADRIDAANKVLDRMKKRGFSP 1508
G F SK IDKAIQVM +LE HG PD+ AYNA+I+GFC+A+RID+A +VLDRMK +GFSP
Sbjct: 100 HGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSP 159
Query: 1507 DVVTYNILIGNLCGKGKLDLALRVMDQLLKDNCKPTVITYTILIEATIIEGGIDEAMKLL 1328
D+VTYNILIG+LC +G LD AL +QLLK+NCKPTV+TYTILIEAT+++GGIDEAMKLL
Sbjct: 160 DIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLL 219
Query: 1327 DEMLSRGLQPDMYTYNVIVKGMCREGLVDRAFEFVSSISDKGCAAGVSSYNILLRGLLNE 1148
DEML LQPDM+TYN I++GMCREG VDRAF+ +SSIS KG A V +YNILLRGLLN+
Sbjct: 220 DEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQ 279
Query: 1147 GKWEAVERLINDMFAKGCEPNVVTYSTLIGSLCRDGRIVEAKNVLKVMKEKGLTPDSYSY 968
GKWEA L++DM A+GCE NVVTYS LI S+CRDG++ E +LK MK+KGL PD Y Y
Sbjct: 280 GKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCY 339
Query: 967 DPLISAFCREGRVDLAIEFMVNMIADGCLPDVFSYNRILASLCKNGNADEALSIFEKLGE 788
DPLI+A C+EGRVDLAIE + MI+DGC+PD+ +YN ILA LCK ADEALSIFEKLGE
Sbjct: 340 DPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGE 399
Query: 787 VGCPLDASSYNTMLGALWSSGDKTRALGMVLKMLSNGVDPDGITYNSLISCLCRDGMVDE 608
VGC +ASSYN+M ALWS+G K RALGM+L+ML GVDPDGITYNSLISCLCRDGMVDE
Sbjct: 400 VGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDE 459
Query: 607 AIELLVDMLEMGSGSRCKPTVISYNIVLLGLCKVHRIVDAIEVLAAMVDKGCRPNETSYT 428
AIELLVDM EM S S CKP+V+SYNIVLLGLCKV R+ DAIEVLAAMVDKGCRPNET+YT
Sbjct: 460 AIELLVDM-EMES-SECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYT 517
Query: 427 LLIQGIGFAGWPNDAMELASSLVSMGAISEYSFNRLNKTFPVLDVYKELAFSD 269
LI+GIGF G NDA +LA++LV+M AISE+SF RL KTF LDVY++L SD
Sbjct: 518 FLIEGIGFGGCLNDARDLATTLVNMDAISEHSFERLYKTFCKLDVYRQLNLSD 570
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 748 bits (1930), Expect = 0.0
Identities = 368/531 (69%), Positives = 442/531 (83%)
Frame = -1
Query: 1861 SETTRPQVVQNYNFGDTHFMKVLNRSCKTGKYNESLYFLQHMVNKGYKPDVILCTKLIKG 1682
S RP +Q+Y+F +TH MK+LNRSCK GK+NESLYFL+ +VNKGY PDVILCTKLIKG
Sbjct: 53 SAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKG 112
Query: 1681 FFNSKRIDKAIQVMEVLEKHGDPDVFAYNAVISGFCKADRIDAANKVLDRMKKRGFSPDV 1502
FFN K I+KA +VME+LE H +PDVFAYNAVISGFCK +RI+AA +VL+RMK RGF PD+
Sbjct: 113 FFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDI 172
Query: 1501 VTYNILIGNLCGKGKLDLALRVMDQLLKDNCKPTVITYTILIEATIIEGGIDEAMKLLDE 1322
VTYNI+IG+LC + KL LAL+V+DQLL DNC PTVITYTILIEATI+EGGI+EAMKLL+E
Sbjct: 173 VTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 232
Query: 1321 MLSRGLQPDMYTYNVIVKGMCREGLVDRAFEFVSSISDKGCAAGVSSYNILLRGLLNEGK 1142
ML+RGL PDMYTYN I++GMC+EG+V+RA E ++S++ KGC V SYNILLR LN+GK
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292
Query: 1141 WEAVERLINDMFAKGCEPNVVTYSTLIGSLCRDGRIVEAKNVLKVMKEKGLTPDSYSYDP 962
W+ E+L+ +MF++GCEPN VTYS LI SLCR GRI EA +VLKVM EK LTPD+YSYDP
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352
Query: 961 LISAFCREGRVDLAIEFMVNMIADGCLPDVFSYNRILASLCKNGNADEALSIFEKLGEVG 782
LISA C+EGR+DLAI M MI++GCLPD+ +YN ILA+LCKNGNA++AL IF KL +G
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412
Query: 781 CPLDASSYNTMLGALWSSGDKTRALGMVLKMLSNGVDPDGITYNSLISCLCRDGMVDEAI 602
CP + SSYNTM+ ALWS GD++RALGMV M+S GVDPD ITYNSLISCLCRDG+V+EAI
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472
Query: 601 ELLVDMLEMGSGSRCKPTVISYNIVLLGLCKVHRIVDAIEVLAAMVDKGCRPNETSYTLL 422
LL DM + G +PTVISYNIVLLGLCKV RI DAI + A M++KGCRPNET+Y LL
Sbjct: 473 GLLDDMEQSG----FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILL 528
Query: 421 IQGIGFAGWPNDAMELASSLVSMGAISEYSFNRLNKTFPVLDVYKELAFSD 269
I+GIGFAGW +AMELA+SL S IS+ SF RLNKTFP+LDVYKEL+ S+
Sbjct: 529 IEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSNSE 579
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 746 bits (1926), Expect = 0.0
Identities = 359/531 (67%), Positives = 442/531 (83%)
Frame = -1
Query: 1861 SETTRPQVVQNYNFGDTHFMKVLNRSCKTGKYNESLYFLQHMVNKGYKPDVILCTKLIKG 1682
S TR V +++F + H MK+LNRSC+ GKYNESLYFL+ MV+KGY PDVILCTKLIKG
Sbjct: 54 SAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKG 113
Query: 1681 FFNSKRIDKAIQVMEVLEKHGDPDVFAYNAVISGFCKADRIDAANKVLDRMKKRGFSPDV 1502
FFNS+ I KA +VME+LE++G PDVFAYNA+ISGF KA++++ AN+VLDRMK RGF PDV
Sbjct: 114 FFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDV 173
Query: 1501 VTYNILIGNLCGKGKLDLALRVMDQLLKDNCKPTVITYTILIEATIIEGGIDEAMKLLDE 1322
VTYNI+IG+ C +GKLDLAL + ++LLKDNC+PTVITYTILIEATI++GGID AMKLLDE
Sbjct: 174 VTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDE 233
Query: 1321 MLSRGLQPDMYTYNVIVKGMCREGLVDRAFEFVSSISDKGCAAGVSSYNILLRGLLNEGK 1142
MLS+GL+PD TYN I++GMC+E +VD+AFE + S+S +GC + +YNILLR LL+ GK
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK 293
Query: 1141 WEAVERLINDMFAKGCEPNVVTYSTLIGSLCRDGRIVEAKNVLKVMKEKGLTPDSYSYDP 962
W E+LI++M + GC+PNVVT+S LIG+LCRDG++ EA N+L+ MKEKGL PD+Y YDP
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDP 353
Query: 961 LISAFCREGRVDLAIEFMVNMIADGCLPDVFSYNRILASLCKNGNADEALSIFEKLGEVG 782
LI+ FCREGR+DLA EF+ MI+DGCLPD+ +YN I+A LC+ G AD+AL +FEKL EVG
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 781 CPLDASSYNTMLGALWSSGDKTRALGMVLKMLSNGVDPDGITYNSLISCLCRDGMVDEAI 602
CP + SSYNT+ ALWSSGD+ RAL M+LK+L+ G+DPD ITYNSLISCLCRDGMVDEAI
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 601 ELLVDMLEMGSGSRCKPTVISYNIVLLGLCKVHRIVDAIEVLAAMVDKGCRPNETSYTLL 422
ELLVDM R +P V+SYNI+LLGLCKV+R DAIEVLAAM +KGC+PNET+Y LL
Sbjct: 474 ELLVDM----QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILL 529
Query: 421 IQGIGFAGWPNDAMELASSLVSMGAISEYSFNRLNKTFPVLDVYKELAFSD 269
I+GIGF+G +AMELA+SL M AISE SFNRLNKTFP+LDVYK+L FSD
Sbjct: 530 IEGIGFSGLRAEAMELANSLHGMNAISEDSFNRLNKTFPLLDVYKDLTFSD 580