BLASTX nr result

ID: Glycyrrhiza23_contig00012377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012377
         (1685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like...   389   e-105
ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like...   379   e-102
ref|XP_003602261.1| RING finger protein [Medicago truncatula] gi...   335   2e-89
ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like...   324   5e-86
ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like...   323   1e-85

>ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 399

 Score =  389 bits (1000), Expect = e-105
 Identities = 208/298 (69%), Positives = 227/298 (76%), Gaps = 5/298 (1%)
 Frame = -3

Query: 1248 AVDFSPPLIXXXXXXXXXXXXVTYSRVIGRHLRPPIQXXXXXXXXXXXXLPSSAGDSDSL 1069
            AVDFSPPLI            VTYSR+I RHLRPPI              PSS GD +SL
Sbjct: 35   AVDFSPPLIAMVVVVAAAFLVVTYSRLIARHLRPPIHRLLRRFRRRRFL-PSSVGDLESL 93

Query: 1068 QYDSTTFDGPHVWSPYGLDESVIKTIPFSLYTANTKYELEDSRRDCAVCLFEFEDDDYVR 889
             Y+S  FDGPHV+SPYGLDE+VIKTIPFSLYTA      ++SR DCAVCL EFEDDDYVR
Sbjct: 94   PYESP-FDGPHVFSPYGLDETVIKTIPFSLYTAKYDARFDESRNDCAVCLLEFEDDDYVR 152

Query: 888  TLPVCSHTFHVDCIDAWLRSHANCPLCRSGVLCAEYSSPFTPLMASRIRPSFDD----HV 721
            TLP+CSHTFHVDCIDAWLRSHANCPLCR+GVLC +  SPFTP+MA+RIRPSFDD    H 
Sbjct: 153  TLPICSHTFHVDCIDAWLRSHANCPLCRAGVLCTD--SPFTPMMAARIRPSFDDDTILHR 210

Query: 720  ISILHVDNTPLYTPSHNSLQHEITPCVDENSPRRNTNN-GVVSEDRFNGARDFLLKRSYS 544
            ISI  + + PL   +  S   EITPCVDENSPRRN N+  V SED F   RDFLLKRSYS
Sbjct: 211  ISIDPLIDPPLLPAAAISSVPEITPCVDENSPRRNQNHANVNSEDCF---RDFLLKRSYS 267

Query: 543  FGFERSLPSERMVIEPATASPWRYRRGSTTGFWSKRPSPFGSLGKSRVFSFRYYRGMK 370
            FGFERSL SERMV+EPATASPWRYRRGS++ FWSKRPSPFGSLGK RVFSFRYYRGMK
Sbjct: 268  FGFERSLASERMVMEPATASPWRYRRGSSS-FWSKRPSPFGSLGKPRVFSFRYYRGMK 324


>ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 393

 Score =  379 bits (973), Expect = e-102
 Identities = 204/300 (68%), Positives = 226/300 (75%), Gaps = 7/300 (2%)
 Frame = -3

Query: 1248 AVDFSPPLIXXXXXXXXXXXXVTYSRVIGRHLRPPIQXXXXXXXXXXXXLPSSAGDSDSL 1069
            AVDF+PPLI            VTYSR+I RHLRPP+              PSS GD +SL
Sbjct: 31   AVDFTPPLIAMVVVVAAAFLVVTYSRLIARHLRPPVHRLLRRFRRRRFL-PSSVGDLESL 89

Query: 1068 QYDSTTFDGPHVWSPYGLDESVIKTIPFSLYTANTKYELEDSRRDCAVCLFEFEDDDYVR 889
             YDS  FDGPHV+SPYGLDE+VIKTIPFSLYTA      ++SR DCAVCL EFED+DYVR
Sbjct: 90   PYDSP-FDGPHVFSPYGLDETVIKTIPFSLYTAKYDARFDESRYDCAVCLLEFEDEDYVR 148

Query: 888  TLPVCSHTFHVDCIDAWLRSHANCPLCRSGVLCAEYSSPFTPLMASRIRPSFDD----HV 721
            TLPVCSHTFHVDCIDAWLRSHANCPLCR+GVLC +  SPFTP+MA+RIRPS DD    H 
Sbjct: 149  TLPVCSHTFHVDCIDAWLRSHANCPLCRAGVLCTD--SPFTPMMAARIRPSLDDDTILHR 206

Query: 720  ISILHVDNTPLYTPSHNSLQ--HEITPCVDENSPRRNTNN-GVVSEDRFNGARDFLLKRS 550
            ISI  + + P    S  ++    EITPCVDEN+PRRN N+  V SED F   RDFLLKRS
Sbjct: 207  ISIDPLIDLPPQPASAVAISSVSEITPCVDENTPRRNQNHANVNSEDCF---RDFLLKRS 263

Query: 549  YSFGFERSLPSERMVIEPATASPWRYRRGSTTGFWSKRPSPFGSLGKSRVFSFRYYRGMK 370
            YSFGFERSL SERMV+EPATASPWRYRRGS++ FWSKRPSPFGSLGK RVFSFRYYRGMK
Sbjct: 264  YSFGFERSLASERMVMEPATASPWRYRRGSSS-FWSKRPSPFGSLGKPRVFSFRYYRGMK 322


>ref|XP_003602261.1| RING finger protein [Medicago truncatula] gi|355491309|gb|AES72512.1|
            RING finger protein [Medicago truncatula]
          Length = 358

 Score =  335 bits (859), Expect = 2e-89
 Identities = 204/358 (56%), Positives = 223/358 (62%), Gaps = 2/358 (0%)
 Frame = -3

Query: 1245 VDFSPPLIXXXXXXXXXXXXVTYSRVIGRHLRPPIQXXXXXXXXXXXXLPSSAGDSDSLQ 1066
            VDFSPPLI            VTYSR+I RHL PPI               SS GD +SLQ
Sbjct: 30   VDFSPPLIAMVVVVAAAFVLVTYSRLITRHLSPPIHRLIQRFHRPPPSS-SSLGDIESLQ 88

Query: 1065 YDSTTFDGPHVWSPYGLDESVIKTIPFSLYTANTKYELEDSRRDCAVCLFEFEDDDYVRT 886
            YDST+F+ P     YGLDES+IKTIPF +YT  TKYE ++SRRDCAVCL EFED DYVRT
Sbjct: 89   YDSTSFETPLT---YGLDESIIKTIPFFIYT--TKYE-QESRRDCAVCLLEFEDHDYVRT 142

Query: 885  LPVCSHTFHVDCIDAWLRSHANCPLCRSGVLCAEYSSPFTPLMASRIRPSFDDHVISILH 706
            LP+CSHTFH+DCIDAWLRSHANCPLCRS +LC    SPF PLMA+RIRPSF D   + LH
Sbjct: 143  LPLCSHTFHLDCIDAWLRSHANCPLCRSLLLC---ESPFRPLMAARIRPSFHDQT-NALH 198

Query: 705  VDNTPLYTPSHNSLQHEITPCVDENSPRRNTNNGVVSEDRFNGARDFLLKRSYSFGFERS 526
            +D     TP+      EITP    +SP     NG   E+RF    DFLLKRSYSFGFERS
Sbjct: 199  LD-----TPA-----PEITP----HSP----VNG--EENRFTRREDFLLKRSYSFGFERS 238

Query: 525  LPSERMVIEPATASPWRYRRGSTTGFWSKRPSPFGSLGKSRVFSFRYYRGMK--XXXXXX 352
            LPSERMVI+PAT SPWRYRRGS + FWSKRPSPFGSLGKSRVFSFRYYRGMK        
Sbjct: 239  LPSERMVIDPATTSPWRYRRGSNS-FWSKRPSPFGSLGKSRVFSFRYYRGMKSPFFRRRG 297

Query: 351  XXXXXPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGDPEALLSPERFN 178
                                                       RCGDPEALLSPERFN
Sbjct: 298  FFPLSESSVRYAGDGGSSWRRSKSIASPMFSRSSAAVFSSSRLRCGDPEALLSPERFN 355


>ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
            gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2
            finger protein ATL65-like [Cucumis sativus]
            gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2
            finger protein ATL65-like [Cucumis sativus]
          Length = 421

 Score =  324 bits (830), Expect = 5e-86
 Identities = 184/314 (58%), Positives = 213/314 (67%), Gaps = 22/314 (7%)
 Frame = -3

Query: 1245 VDFSPPLIXXXXXXXXXXXXVTYSRVIGRHLRPPI------------QXXXXXXXXXXXX 1102
            VDFSPPLI            VTYSR+I RHL PPI            +            
Sbjct: 50   VDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSY 109

Query: 1101 LPSSAG-DSDSLQYDSTTF----DGPHVWSPYGLDESVIKTIPFSLYTANTKYELEDSRR 937
            +PSS+G D DSL YDS  F    D  HV+SPYGLDESVIKTIP S+YTA ++       R
Sbjct: 110  IPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSR------DR 163

Query: 936  DCAVCLFEFEDDDYVRTLPVCSHTFHVDCIDAWLRSHANCPLCRSGVLCAEYSSPFTPLM 757
            +CAVCL EFEDDDYVRTLP+CSH FHVDCID WLRSHANCPLCR+ V   E  SPFTP+M
Sbjct: 164  ECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPE--SPFTPVM 221

Query: 756  ASRIRPSFDDHVISILHVDNTPLYTP-----SHNSLQHEITPCVDENSPRRNTNNGVVSE 592
            A+RIRPS DD ++  + ++      P     S+++ + EITPC+DE    RN+N+    E
Sbjct: 222  AARIRPSLDDTILRSIILEPLAEGPPIPNRDSYHATESEITPCIDE---PRNSNS---VE 275

Query: 591  DRFNGARDFLLKRSYSFGFERSLPSERMVIEPATASPWRYRRGSTTGFWSKRPSPFGSLG 412
            D+ NG RDFLLKRSYSFGFERSL SERM++EPAT SPWRYRRGS   FWSKRPSPFGSL 
Sbjct: 276  DQMNG-RDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRGS---FWSKRPSPFGSLP 331

Query: 411  KSRVFSFRYYRGMK 370
            K+RVFSFRYYRGMK
Sbjct: 332  KARVFSFRYYRGMK 345


>ref|XP_002281140.2| PREDICTED: RING-H2 finger protein ATL65-like [Vitis vinifera]
          Length = 396

 Score =  323 bits (827), Expect = 1e-85
 Identities = 195/369 (52%), Positives = 220/369 (59%), Gaps = 13/369 (3%)
 Frame = -3

Query: 1245 VDFSPPLIXXXXXXXXXXXXVTYSRVIGRHLRPPI-------QXXXXXXXXXXXXLPSSA 1087
            VDFSPPLI            VTYSR+I RHL PP        +            +PSSA
Sbjct: 40   VDFSPPLIAMVVVVATAFLIVTYSRLISRHLLPPFLRLLRSWRRWHRRRRRRRSHMPSSA 99

Query: 1086 GDSDSLQYDSTTFDGPH---VWSPYGLDESVIKTIPFSLYTAN--TKYELEDSRRDCAVC 922
            GD +S  Y+ + FD      V+SPYGLDESVIKTIP SLYTA   +K+   D  RDCAVC
Sbjct: 100  GDIESPPYNGS-FDATEAYQVFSPYGLDESVIKTIPLSLYTAKGLSKHGFVDDSRDCAVC 158

Query: 921  LFEFEDDDYVRTLPVCSHTFHVDCIDAWLRSHANCPLCRSGVLCAEYSSPFTPLMASRIR 742
            L EFED+D VR LPVCSH FHVDCID WLRSHANCPLCR+G+    + SPF P+MA+RIR
Sbjct: 159  LLEFEDNDCVRVLPVCSHAFHVDCIDIWLRSHANCPLCRAGIF--RHESPFIPVMAARIR 216

Query: 741  PSFDDHVISILHVDNTPLYTPSHNSLQHEITPCVDENSPRRNTNNGVVSEDRFNGARDFL 562
            PS DD ++  + ++      P   +   EI P   E SPRRN      SEDRFN ARDF+
Sbjct: 217  PSLDDAILESILLEPLSEAAPESETTVTEIVPA--EPSPRRNQ-----SEDRFN-ARDFM 268

Query: 561  LKRSYSFGFERSLPSERMVIEPATASPWRYRRGSTTGFWSKRPSPFGSLGKSRVFSFRYY 382
            LKRSYSFGFER+ PSER+V+EPATASPWRYRRGS   FWSKRPSPFGSL KSRVFSFRYY
Sbjct: 269  LKRSYSFGFERNFPSERLVMEPATASPWRYRRGS---FWSKRPSPFGSLTKSRVFSFRYY 325

Query: 381  RGMKXXXXXXXXXXXPL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGDPE 205
            RGMK           PL                                     RC D E
Sbjct: 326  RGMKSPFFRRRGSFFPLSESHARFSGGGSSRRTKSLTSPIFIRSSATASASTRLRCRDLE 385

Query: 204  ALLSPERFN 178
            ALLSPERFN
Sbjct: 386  ALLSPERFN 394


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