BLASTX nr result

ID: Glycyrrhiza23_contig00012347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012347
         (2102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...   833   0.0  
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   809   0.0  
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   786   0.0  
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   685   0.0  
ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula] ...   594   e-167

>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 956

 Score =  833 bits (2152), Expect = 0.0
 Identities = 395/486 (81%), Positives = 434/486 (89%)
 Frame = -2

Query: 2101 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLPDLEITFFLGEPFRPFDQLM 1922
            VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDL DLEITFF+GEPFRPFDQLM
Sbjct: 472  VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFMGEPFRPFDQLM 531

Query: 1921 GTLPASSSSALPQKYRDLMNDPSSPIFQFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLL 1742
            GTLP+SSSSALP++YRDLM +PSSPI QFYPSDFEIDMNGK+++WQGVAKLPFIDEKKLL
Sbjct: 532  GTLPSSSSSALPERYRDLMINPSSPILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLL 591

Query: 1741 AATRKLEGTLTEEEQLRNSEMLNLLYVSCAHKLAPHILLYYQRFSHLPPLERPALPIDTS 1562
            +ATR LEGTLTEEEQLRNS+ML+LLYVS AHKL PHIL YYQ +SHLP  +RP LPID S
Sbjct: 592  SATRTLEGTLTEEEQLRNSKMLDLLYVSRAHKLVPHILFYYQNYSHLPHQQRPVLPIDPS 651

Query: 1561 ASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEYNQVLNITYLKPRSHKHIPKPPDGVVMP 1382
            ASDGMNGF WSYERNV RTVV SPIKGL+DI  NQVLNITYL PR+H+HIPKPPDGVVMP
Sbjct: 652  ASDGMNGFLWSYERNVFRTVVSSPIKGLQDIACNQVLNITYLNPRTHRHIPKPPDGVVMP 711

Query: 1381 KKILKALDIKPLPMLWHEDNSSRRQQGRERAQVPGAIAGPQLGEAAHRLVKNSLRLNNTS 1202
            +KIL+ALDIKPLP+LWHEDN SRR Q RER QVPGAIAGPQLGEAAHRLV+NSL+ NN +
Sbjct: 712  QKILRALDIKPLPVLWHEDN-SRRHQARERQQVPGAIAGPQLGEAAHRLVRNSLQFNNNT 770

Query: 1201 HGLSEQFPGHHTMNRLRSTGASGSGKYYGEDTSGYYGNYYNHQGIITRPRFPVSSNGGQY 1022
                +QFP  HTMNR+R TGASGSGKYYGE++SGYYG  YN QG++TRPRFP++SNG Q 
Sbjct: 771  -SYPDQFPSQHTMNRVRPTGASGSGKYYGEESSGYYGQNYNPQGMMTRPRFPIASNGWQN 829

Query: 1021 DRQNFRMQDRSQHYDQFHNMKTGFYASTIDEGMRPRSSAVPSPKAPAMMLSRLPNSGHTN 842
            DRQN R+QDRSQH++QFHNMKTGF A TIDEG+RPRSSAVPSPK PAMML R  NSGHT 
Sbjct: 830  DRQNIRIQDRSQHHEQFHNMKTGFQALTIDEGVRPRSSAVPSPKTPAMMLMRPQNSGHTT 889

Query: 841  IPQHQFVQNVGPPIPPPKWISKAPDTNGIYARHQEAALGGAYDKPMKVVYQVKTHKPQDM 662
              Q QFVQN+GPPIPPP WISKAPDTNG+YARHQEAA+GGAYDKP+K VYQ+KT  PQDM
Sbjct: 890  NLQPQFVQNIGPPIPPPNWISKAPDTNGMYARHQEAAVGGAYDKPIKKVYQIKTRNPQDM 949

Query: 661  PEHGNQ 644
            PE GNQ
Sbjct: 950  PEQGNQ 955


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  809 bits (2090), Expect = 0.0
 Identities = 387/488 (79%), Positives = 420/488 (86%), Gaps = 2/488 (0%)
 Frame = -2

Query: 2101 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLPDLEITFFLGEPFRPFDQLM 1922
            VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDL DLEITFFLGEPF+PFDQLM
Sbjct: 474  VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLM 533

Query: 1921 GTLPASSSSALPQKYRDLMNDPSSPIFQFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLL 1742
            GTLPASSSSALP+KYRDLM DPSSPI QFYP+DFEIDMNGKRFAWQGVAKLPFIDEKKLL
Sbjct: 534  GTLPASSSSALPEKYRDLMIDPSSPILQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLL 593

Query: 1741 AATRKLEGTLTEEEQLRNSEMLNLLYVSCAHKLAPHILLYYQRFSHLPPLERPALPIDTS 1562
            +AT KLE TLTEEEQLRNS+ML+LLYVS AH LAPHIL Y+Q    LP  ERPALPID  
Sbjct: 594  SATSKLEATLTEEEQLRNSKMLDLLYVSSAHNLAPHILSYHQYSCQLPLHERPALPIDPR 653

Query: 1561 ASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEYNQVLNITYLKPRSHKHIPKPPDGVVMP 1382
            ASDGMNG+ W YERNVLRT V SPIKGL+DIE+NQVLNITYL PR H+HIPKPPDGV+MP
Sbjct: 654  ASDGMNGYLWLYERNVLRTTVSSPIKGLQDIEFNQVLNITYLNPRKHRHIPKPPDGVLMP 713

Query: 1381 KKILKALDIKPLPMLWHEDNSSRRQQGRERAQVPGAIAGPQLGEAAHRLVKNSLRL--NN 1208
            KKILKA+DIKP P+LWHEDNS RR QGRER QV GA+AGPQLGEAAHRLVKNSL +  NN
Sbjct: 714  KKILKAIDIKPFPVLWHEDNSGRR-QGRERQQVHGAMAGPQLGEAAHRLVKNSLNIKSNN 772

Query: 1207 TSHGLSEQFPGHHTMNRLRSTGASGSGKYYGEDTSGYYGNYYNHQGIITRPRFPVSSNGG 1028
              +G  EQFPGHH MNRLRS G SGSGKYYGEDTSGYYG +YNHQGIITRPR+PVSSNGG
Sbjct: 773  MPYGSPEQFPGHHAMNRLRSAGPSGSGKYYGEDTSGYYGQHYNHQGIITRPRYPVSSNGG 832

Query: 1027 QYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDEGMRPRSSAVPSPKAPAMMLSRLPNSGH 848
              D+QNFR+QDRS H+DQ++N  TGFY   ++EG R R  AVP P+ PA+ LSR PNSG 
Sbjct: 833  HNDKQNFRIQDRSYHHDQYYNGTTGFYTMAMEEGARARPYAVPLPRTPAVTLSRPPNSGS 892

Query: 847  TNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYARHQEAALGGAYDKPMKVVYQVKTHKPQ 668
            T   QHQFVQN+GPPIPPP WI++ PDTNGIYA HQE ALGG YDK    VYQVKT +PQ
Sbjct: 893  TTNGQHQFVQNMGPPIPPPNWITRVPDTNGIYAGHQETALGGTYDKQNMKVYQVKTRQPQ 952

Query: 667  DMPEHGNQ 644
            DMPE+GNQ
Sbjct: 953  DMPEYGNQ 960


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  786 bits (2030), Expect = 0.0
 Identities = 379/488 (77%), Positives = 417/488 (85%), Gaps = 2/488 (0%)
 Frame = -2

Query: 2101 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLPDLEITFFLGEPFRPFDQLM 1922
            VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDL DLEITFFLGEPF+PFDQLM
Sbjct: 472  VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFLGEPFKPFDQLM 531

Query: 1921 GTLPASSSSALPQKYRDLMNDPSSPIFQFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLL 1742
            GTLPASSSSALP+KYRDLM DPSS I QFYP+DFEIDMNGKRFAWQGVAKLPFIDEKKLL
Sbjct: 532  GTLPASSSSALPKKYRDLMIDPSSSILQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLL 591

Query: 1741 AATRKLEGTLTEEEQLRNSEMLNLLYVSCAHKLAPHILLYYQRFSHLPPLERPALPIDTS 1562
            +AT KLE TLTEEEQLRNS+ML+LLYVS AH LAPHIL YYQ    LP  ERPA PID  
Sbjct: 592  SATSKLEATLTEEEQLRNSKMLDLLYVSSAHNLAPHILSYYQYSCQLPLHERPAQPIDPR 651

Query: 1561 ASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEYNQVLNITYLKPRSHKHIPKPPDGVVMP 1382
             SDGMNG+ W YERNVLRT+V SPIKGL+DIE+NQVLNITYL PR H+HIPK PDGV+MP
Sbjct: 652  VSDGMNGYLWLYERNVLRTIVSSPIKGLQDIEFNQVLNITYLNPRKHRHIPKAPDGVLMP 711

Query: 1381 KKILKALDIKPLPMLWHEDNSSRRQQGRERAQVPGAIAGPQLGEAAHRLVKNSLRL--NN 1208
            KKILKA+DIKP P+LWHE+NS RR QGRER QV GA+AGPQLGEAAHRLVKNSL +  NN
Sbjct: 712  KKILKAIDIKPFPVLWHEENSGRR-QGRER-QVHGAMAGPQLGEAAHRLVKNSLNIKSNN 769

Query: 1207 TSHGLSEQFPGHHTMNRLRSTGASGSGKYYGEDTSGYYGNYYNHQGIITRPRFPVSSNGG 1028
              +G  EQFPGHH MNRLRS G SG GKYY ED SGYYG   NHQG+ITRPR+PVSSNGG
Sbjct: 770  MPYGSPEQFPGHHAMNRLRSAGPSGYGKYYVEDKSGYYGQQNNHQGMITRPRYPVSSNGG 829

Query: 1027 QYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDEGMRPRSSAVPSPKAPAMMLSRLPNSGH 848
              ++QNFR+QDRSQH++Q++N +TGF+  T++EG RPR  AVPSP+   +MLSR PNSG 
Sbjct: 830  NNEKQNFRIQDRSQHHEQYYNGRTGFHTMTMEEGARPRPYAVPSPRTQVVMLSRSPNSGP 889

Query: 847  TNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYARHQEAALGGAYDKPMKVVYQVKTHKPQ 668
            T   QHQFVQN+GPPIPPP WI++APDTNGIYA HQE ALGGAYDK    VYQ KT +PQ
Sbjct: 890  TTNGQHQFVQNMGPPIPPPNWITRAPDTNGIYAWHQETALGGAYDKQHIKVYQAKTRQPQ 949

Query: 667  DMPEHGNQ 644
            DMPE+GNQ
Sbjct: 950  DMPEYGNQ 957


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  685 bits (1767), Expect = 0.0
 Identities = 345/489 (70%), Positives = 389/489 (79%), Gaps = 3/489 (0%)
 Frame = -2

Query: 2101 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLPDLEITFFLGEPFRPFDQLM 1922
            VLKYVEGLCWVCRYYYQGVCSW+WYYPYHYAPFASD KDLPDLEI FF GEPF+PFDQLM
Sbjct: 467  VLKYVEGLCWVCRYYYQGVCSWKWYYPYHYAPFASDFKDLPDLEINFFPGEPFKPFDQLM 526

Query: 1921 GTLPASSSSALPQKYRDLMNDPSSPIFQFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLL 1742
            GTLPASSSSALP+KYRDLM+DPSSPIF FYP+DFEIDMNGKRFAWQGVAKLPFIDEKKLL
Sbjct: 527  GTLPASSSSALPKKYRDLMSDPSSPIFHFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLL 586

Query: 1741 AATRKLEGTLTEEEQLRNSEMLNLLYVSCAHKLAPHILLYYQRFSHLPPLERPALPIDTS 1562
            AATR++E TLTEEEQLRNS ML+LLYV+ AH LA HIL YY   S LPP ER   PIDT+
Sbjct: 587  AATRRIEDTLTEEEQLRNSVMLDLLYVNRAHNLAAHILSYYHVCSQLPPHERCVQPIDTN 646

Query: 1561 ASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEYNQVLNITYLKPRSHKHIPKPPDGVVMP 1382
            AS GMNG+ W  ERNV  +V+ SPI GL+DIEYNQVLNIT+L PR H HIPKPPDGVV+P
Sbjct: 647  ASGGMNGYLWLCERNVFSSVISSPISGLQDIEYNQVLNITFLNPRRHDHIPKPPDGVVIP 706

Query: 1381 KKILKALDIKPLPMLWHEDNSSRRQQGRERAQVPGAIAGPQLGEAAHRLVKNSLRL--NN 1208
            KK+LKA+DIKP P+LWHEDN  +RQQ RER QVPGAIAG QLGEAAHRLVKN+L +  NN
Sbjct: 707  KKVLKAIDIKPFPVLWHEDNIGQRQQARERLQVPGAIAGSQLGEAAHRLVKNTLNIKSNN 766

Query: 1207 TSHGLSEQFPGHHTMNRLRSTGASGSGKYYGEDTSGYYGNYYNHQGIITRPRFPVSSNGG 1028
            TSHGL EQ P HHTMNR RS   +G GKYYGE+TSGYYG  YNH G ITRP++     GG
Sbjct: 767  TSHGLLEQPPVHHTMNRHRS---AGYGKYYGENTSGYYGQ-YNHHG-ITRPKY-----GG 816

Query: 1027 QYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDEGMRPRSSAVPSPKAPAMMLSRLPNSGH 848
            Q DRQN ++QDR  + +QFHN K+ F A T++EG RPRS             SRLPNS  
Sbjct: 817  QNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEEGERPRS-------------SRLPNSRP 863

Query: 847  TNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYARHQEAALGGA-YDKPMKVVYQVKTHKP 671
                Q +F+QN+ P IPPPKW+++ P  NG++ RHQEAALG A +DK  K VYQVKT +P
Sbjct: 864  VTNLQPRFMQNMDPSIPPPKWMTRTPPMNGMHTRHQEAALGPATHDKQTKKVYQVKTRQP 923

Query: 670  QDMPEHGNQ 644
             D PE+G Q
Sbjct: 924  -DTPEYGKQ 931


>ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 1029

 Score =  594 bits (1531), Expect = e-167
 Identities = 309/474 (65%), Positives = 343/474 (72%), Gaps = 15/474 (3%)
 Frame = -2

Query: 2101 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLPDLEITFFLGEPFRPFDQLM 1922
            VLKYVEGLCWVC+YYY GVCSW+WYYPYHYAPFASDLKDLP+LEI F  GEPF+PFDQLM
Sbjct: 466  VLKYVEGLCWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQLM 525

Query: 1921 GTLPASS-----------SSALPQKYRDLMNDPSSPIFQFYPSDFEIDMNGKRFAWQGVA 1775
            G LPAS            S+ALP KYRDLM DPSSPIF FYP+DFEIDMNGKRFAWQGVA
Sbjct: 526  GVLPASRFFLYHVLRSILSNALPDKYRDLMTDPSSPIFHFYPADFEIDMNGKRFAWQGVA 585

Query: 1774 KLPFIDEKKLLAATRKLEGTLT--EEEQLRNSEMLNLLYVSCAHKLAPHILLYYQRFSHL 1601
            KLPFIDEKKLLAATRKLE TLT  EEEQ RNS ML+LLYV+ AH LA HILLYYQ F  L
Sbjct: 586  KLPFIDEKKLLAATRKLEDTLTMQEEEQRRNSVMLDLLYVNRAHDLASHILLYYQVFGRL 645

Query: 1600 PPLERPALPIDTSASDGMNGFFWSYERNVLRTVVPSPIKGLRDIEYNQVLNITYLKPRSH 1421
               ER   PI+ +AS GMNG+ W+ ERNVL ++ PSPI GL DIE NQVLNITYL P  H
Sbjct: 646  ATHERCVSPINANASGGMNGYLWACERNVLSSIAPSPIDGLPDIESNQVLNITYLNPCRH 705

Query: 1420 KHIPKPPDGVVMPKKILKALDIKPLPMLWHEDNSSRRQQGRERAQVPGAIAGPQLGEAAH 1241
             HIPKPPDGVV+PKKI+K +DIKP P+LWHEDN  R QQGRER+QVPGAI G QLGEAAH
Sbjct: 706  GHIPKPPDGVVIPKKIIKDIDIKPSPVLWHEDNVGRGQQGRERSQVPGAITGSQLGEAAH 765

Query: 1240 RLVKNSLRL--NNTSHGLSEQFPGHHTMNRLRSTGASGSGKYYGEDTSGYYGNYYNHQGI 1067
            RLVKN+L +  NNTSHG+ EQ P  HT NR +S G S  GKY GE+T+ YYG  +NH G 
Sbjct: 766  RLVKNTLNIKWNNTSHGVLEQPPVRHTTNRFQSAGPSRYGKYSGENTNSYYGE-HNHHGA 824

Query: 1066 ITRPRFPVSSNGGQYDRQNFRMQDRSQHYDQFHNMKTGFYASTIDEGMRPRSSAVPSPKA 887
            +TR R+PVSSN GQ DRQNFR QDR +H +QF N+KTGF                     
Sbjct: 825  MTRHRYPVSSNAGQVDRQNFRTQDRPRHQEQFQNVKTGF--------------------- 863

Query: 886  PAMMLSRLPNSGHTNIPQHQFVQNVGPPIPPPKWISKAPDTNGIYARHQEAALG 725
                 S L N G   I       N GPP+ P KW +KAP  NG+Y R QEAA G
Sbjct: 864  -----SALTNGG--RIETCTIEANSGPPVRPLKWNTKAP-INGVYPRRQEAASG 909


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