BLASTX nr result

ID: Glycyrrhiza23_contig00012328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012328
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...   252   2e-65
ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containin...   231   7e-59
ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...   177   7e-43

>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 713

 Score =  252 bits (644), Expect = 2e-65
 Identities = 126/174 (72%), Positives = 147/174 (84%)
 Frame = -2

Query: 531 IRGSSCSFLHIKDTGNNTDQEAEGDLVTAYQKRELKLEEGVKENVERSRTNEEEASPSQH 352
           IRGSSCSFLHIKDTG+NTDQEAE D V+ YQKR+LK+EEGV+ENVERSR NE+EA+PS H
Sbjct: 238 IRGSSCSFLHIKDTGDNTDQEAEADSVSTYQKRQLKVEEGVRENVERSRMNEQEATPSWH 297

Query: 351 PSHEKEKFPMRDSLFPENRFAFNASNNYYGPNLSSYLSRAEGMAAIRNQPMYKGYTPTVL 172
           PS EK+KFP RD+LFP+NRF F+AS+NY  PNLS   + A+GMA  RNQ MYKGYT T+L
Sbjct: 298 PSQEKQKFPPRDNLFPDNRFPFSASDNYLSPNLSLNSTCADGMATPRNQHMYKGYTSTLL 357

Query: 171 SHSPNSSGVSQLPATSVSLSHRILGQSGCSLPFGSSLGASYLDSQKLLNSEKEY 10
           SHSPNSS V+Q  A+S+SLSHRIL QSG SLPF SSLGAS +DS K LN++KEY
Sbjct: 358 SHSPNSSLVTQFAASSMSLSHRILAQSGRSLPFSSSLGASNVDSLKFLNTDKEY 411


>ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 521

 Score =  231 bits (588), Expect = 7e-59
 Identities = 117/174 (67%), Positives = 141/174 (81%)
 Frame = -2

Query: 531 IRGSSCSFLHIKDTGNNTDQEAEGDLVTAYQKRELKLEEGVKENVERSRTNEEEASPSQH 352
           IRGSSCSFLHIKDTG N DQEAE DLVT +QKR+LK+EEGV+ENVERSR N++EA+PS H
Sbjct: 230 IRGSSCSFLHIKDTGANIDQEAEADLVTTHQKRQLKVEEGVRENVERSRMNQQEATPSWH 289

Query: 351 PSHEKEKFPMRDSLFPENRFAFNASNNYYGPNLSSYLSRAEGMAAIRNQPMYKGYTPTVL 172
           PS EK+KFP+RD+L PENRF F+AS+NY+  NLS   +RA+GMA +RNQ MYK YT T+L
Sbjct: 290 PSQEKQKFPLRDNLVPENRFPFSASDNYFSSNLSLTSTRADGMATLRNQHMYKRYTSTLL 349

Query: 171 SHSPNSSGVSQLPATSVSLSHRILGQSGCSLPFGSSLGASYLDSQKLLNSEKEY 10
           SHSPNSS VSQ PA+S+ LS +IL QSG SL F      S +DS+K LN++KEY
Sbjct: 350 SHSPNSSLVSQFPASSMPLSQQILAQSGRSLSF------SNVDSKKFLNTDKEY 397


>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355482671|gb|AES63874.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 892

 Score =  177 bits (450), Expect = 7e-43
 Identities = 92/124 (74%), Positives = 100/124 (80%)
 Frame = -2

Query: 531 IRGSSCSFLHIKDTGNNTDQEAEGDLVTAYQKRELKLEEGVKENVERSRTNEEEASPSQH 352
           IRGSSCSFLH+KD+ NNTDQ AEGD+VTA+QKRELKLE+GVKEN       EEEASPS H
Sbjct: 463 IRGSSCSFLHVKDSVNNTDQGAEGDVVTAHQKRELKLEKGVKEN-------EEEASPSWH 515

Query: 351 PSHEKEKFPMRDSLFPENRFAFNASNNYYGPNLSSYLSRAEGMAAIRNQPMYKGYTPTVL 172
           PSHEKEKF MRDSLFPEN+ AFN SNNY+  NLSSY SRAE M AIRNQ MY+GYT T  
Sbjct: 516 PSHEKEKFLMRDSLFPENKSAFNTSNNYFSSNLSSYSSRAEEMIAIRNQHMYRGYTSTKD 575

Query: 171 SHSP 160
             SP
Sbjct: 576 FSSP 579


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