BLASTX nr result

ID: Glycyrrhiza23_contig00012317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012317
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine...   153   2e-35
sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName:...   147   1e-33
ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|3...   144   6e-33
ref|XP_003601827.1| DNA topoisomerase [Medicago truncatula] gi|3...   129   2e-28
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              128   6e-28

>ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine max]
          Length = 1484

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/99 (78%), Positives = 80/99 (80%)
 Frame = -1

Query: 297 HVDYVTNQITAFVMXXXXXXXXXXXXXXXXXXNHLWVFVNALIDNPAFDSQTKETLTTRQ 118
           HVDYVTNQIT FVM                  NHLWVFVN+LIDNPAFDSQTKETLTTRQ
Sbjct: 324 HVDYVTNQITNFVMNKVNKKKKDANVKAHNVKNHLWVFVNSLIDNPAFDSQTKETLTTRQ 383

Query: 117 ASFGSKCDVPESMLKEVANSGIVDTLLSWADFKQSKDLK 1
           ASFGSKCD+PESMLKEVANSGIVDTLLSWADFKQSKDLK
Sbjct: 384 ASFGSKCDIPESMLKEVANSGIVDTLLSWADFKQSKDLK 422


>sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
           II; AltName: Full=PsTopII gi|2330651|emb|CAA74891.1|
           topoisomerase II [Pisum sativum]
          Length = 1462

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/99 (73%), Positives = 78/99 (78%)
 Frame = -1

Query: 297 HVDYVTNQITAFVMXXXXXXXXXXXXXXXXXXNHLWVFVNALIDNPAFDSQTKETLTTRQ 118
           HVDY+TNQIT ++M                  NHLWVFVN+LIDNPAFDSQTKETLTTRQ
Sbjct: 315 HVDYITNQITTYIMNKVNKKKKDANVKAHTVKNHLWVFVNSLIDNPAFDSQTKETLTTRQ 374

Query: 117 ASFGSKCDVPESMLKEVANSGIVDTLLSWADFKQSKDLK 1
           ASFGSKCDVPESMLK+V  SGIVDTLLSWADFKQSKDLK
Sbjct: 375 ASFGSKCDVPESMLKDVEKSGIVDTLLSWADFKQSKDLK 413


>ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|355488319|gb|AES69522.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 1567

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/99 (72%), Positives = 77/99 (77%)
 Frame = -1

Query: 297 HVDYVTNQITAFVMXXXXXXXXXXXXXXXXXXNHLWVFVNALIDNPAFDSQTKETLTTRQ 118
           HVDY+TNQIT ++M                  NHLWVFVNALIDNPAFDSQTKETLTT+ 
Sbjct: 328 HVDYITNQITTYIMNKVNKKKKDANVKAHTVKNHLWVFVNALIDNPAFDSQTKETLTTKP 387

Query: 117 ASFGSKCDVPESMLKEVANSGIVDTLLSWADFKQSKDLK 1
           ASFGSKCDVPESMLK+V  SGIVDTLLSWADFKQSKDLK
Sbjct: 388 ASFGSKCDVPESMLKDVEKSGIVDTLLSWADFKQSKDLK 426


>ref|XP_003601827.1| DNA topoisomerase [Medicago truncatula] gi|355490875|gb|AES72078.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 1345

 Score =  129 bits (324), Expect = 2e-28
 Identities = 66/99 (66%), Positives = 71/99 (71%)
 Frame = -1

Query: 297 HVDYVTNQITAFVMXXXXXXXXXXXXXXXXXXNHLWVFVNALIDNPAFDSQTKETLTTRQ 118
           HVDY+TNQI A VM                  NHLWVFVNALI+NPAFDSQTKETL T Q
Sbjct: 292 HVDYITNQIIAHVMYKVNKKKKDANVKAHTVKNHLWVFVNALINNPAFDSQTKETLMTSQ 351

Query: 117 ASFGSKCDVPESMLKEVANSGIVDTLLSWADFKQSKDLK 1
            SFGS CDVPESMLK+V  SGI+DTLLSWADF +SKD K
Sbjct: 352 PSFGSYCDVPESMLKDVEKSGIMDTLLSWADFNESKDFK 390


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/99 (63%), Positives = 74/99 (74%)
 Frame = -1

Query: 297 HVDYVTNQITAFVMXXXXXXXXXXXXXXXXXXNHLWVFVNALIDNPAFDSQTKETLTTRQ 118
           HVDYVTNQI  FVM                  NHLWVFVNALIDNPAFDSQTKETLT RQ
Sbjct: 322 HVDYVTNQIANFVMSIVNKKNKNANIKAHTVKNHLWVFVNALIDNPAFDSQTKETLTIRQ 381

Query: 117 ASFGSKCDVPESMLKEVANSGIVDTLLSWADFKQSKDLK 1
           +SFGSKC++ +  LK+V+ SG+V++LLSWAD+KQ+KDLK
Sbjct: 382 SSFGSKCELSQEFLKKVSKSGVVESLLSWADYKQNKDLK 420


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