BLASTX nr result

ID: Glycyrrhiza23_contig00012300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012300
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602801.1| Thylakoid lumenal 17.9 kDa protein [Medicago...   316   6e-84
ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   309   6e-82
ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protei...   305   1e-80
gb|AFK42399.1| unknown [Lotus japonicus]                              303   5e-80
ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|2...   277   3e-72

>ref|XP_003602801.1| Thylakoid lumenal 17.9 kDa protein [Medicago truncatula]
           gi|355491849|gb|AES73052.1| Thylakoid lumenal 17.9 kDa
           protein [Medicago truncatula]
          Length = 216

 Score =  316 bits (809), Expect = 6e-84
 Identities = 153/167 (91%), Positives = 159/167 (95%), Gaps = 1/167 (0%)
 Frame = -3

Query: 750 HAIPSLNSQSPPTSL-TTPFSQSKNLQLGLENGKIRPCPSTNPGCVSTNPKSSSFAFPWL 574
           HAIPSLNSQ PPT+L TTPFSQSKNLQLGLENGKIRPCPS NPGC+STNPKSSSF FPW 
Sbjct: 50  HAIPSLNSQPPPTTLSTTPFSQSKNLQLGLENGKIRPCPSINPGCISTNPKSSSFDFPWT 109

Query: 573 IPENSTDNAIQKLREAILETQKNVKFQLVEDTPDGQYLQAEVDGRFDRDVLEFLVKGDVV 394
           +PENS DNAIQ+LREAILETQKNVKFQ VEDTPDGQYLQAEVDG+FDRDVLEFLVKGDVV
Sbjct: 110 VPENSVDNAIQRLREAILETQKNVKFQPVEDTPDGQYLQAEVDGKFDRDVLEFLVKGDVV 169

Query: 393 AFRCMAAKVTYVYPFTTALGDSKGQEARLKQINDQLGWYAPSFDSME 253
           AFRCMAAKVTY+YPFTTA GDSKGQEARLKQINDQLGWYAPSFDSME
Sbjct: 170 AFRCMAAKVTYIYPFTTAFGDSKGQEARLKQINDQLGWYAPSFDSME 216


>ref|XP_003526952.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 223

 Score =  309 bits (792), Expect = 6e-82
 Identities = 158/211 (74%), Positives = 167/211 (79%), Gaps = 3/211 (1%)
 Frame = -3

Query: 876 ACSSNINTIPKLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---HAIPSLNSQSPPTSL 706
           A SS INT PKLK                                HAIPSLNSQ PP SL
Sbjct: 12  ASSSYINTAPKLKTTHTPNLVLGQRVLPNLLSLALAVTLASPLPSHAIPSLNSQPPPISL 71

Query: 705 TTPFSQSKNLQLGLENGKIRPCPSTNPGCVSTNPKSSSFAFPWLIPENSTDNAIQKLREA 526
           TTPFSQSKNL+LGLENGKIRPCPS NPGC+STNPKSSSF+FPWLIP NS+D+AIQKLREA
Sbjct: 72  TTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFSFPWLIPSNSSDDAIQKLREA 131

Query: 525 ILETQKNVKFQLVEDTPDGQYLQAEVDGRFDRDVLEFLVKGDVVAFRCMAAKVTYVYPFT 346
           IL+TQKNVKFQ VEDTPDGQYLQAEVDG F RD+LEFLVKGDVVA+RC+A KVTYVYPFT
Sbjct: 132 ILKTQKNVKFQPVEDTPDGQYLQAEVDGGFGRDILEFLVKGDVVAYRCVAMKVTYVYPFT 191

Query: 345 TALGDSKGQEARLKQINDQLGWYAPSFDSME 253
           TA GDSKGQEARLKQINDQLGWYAPSFDSME
Sbjct: 192 TAFGDSKGQEARLKQINDQLGWYAPSFDSME 222


>ref|XP_003523151.1| PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 221

 Score =  305 bits (781), Expect = 1e-80
 Identities = 147/166 (88%), Positives = 156/166 (93%)
 Frame = -3

Query: 750 HAIPSLNSQSPPTSLTTPFSQSKNLQLGLENGKIRPCPSTNPGCVSTNPKSSSFAFPWLI 571
           +AIPSLNSQSPP S TTPFSQSKNL+LGLENGKIRPCPS NPGC+STNPKSSSFAFPWLI
Sbjct: 55  YAIPSLNSQSPPISFTTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFAFPWLI 114

Query: 570 PENSTDNAIQKLREAILETQKNVKFQLVEDTPDGQYLQAEVDGRFDRDVLEFLVKGDVVA 391
           P NS D+AIQKLREAIL+TQKNVKFQ VED+PDGQYLQAEVDG F RDV+EFLVKGDVVA
Sbjct: 115 PSNSLDDAIQKLREAILKTQKNVKFQPVEDSPDGQYLQAEVDGGFGRDVIEFLVKGDVVA 174

Query: 390 FRCMAAKVTYVYPFTTALGDSKGQEARLKQINDQLGWYAPSFDSME 253
           +RC+A KVTYVYPFTTALGDSKGQEARLKQIND LGWYAPSFDSME
Sbjct: 175 YRCVAMKVTYVYPFTTALGDSKGQEARLKQINDHLGWYAPSFDSME 220


>gb|AFK42399.1| unknown [Lotus japonicus]
          Length = 214

 Score =  303 bits (775), Expect = 5e-80
 Identities = 153/202 (75%), Positives = 162/202 (80%)
 Frame = -3

Query: 858 NTIPKLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHAIPSLNSQSPPTSLTTPFSQSKN 679
           NTIPKLK                            S AIPSLNSQ P TSLTTPFSQ+KN
Sbjct: 13  NTIPKLKTINPSIGTKFLPNLLSLALAVTLTSPLPSSAIPSLNSQPPSTSLTTPFSQAKN 72

Query: 678 LQLGLENGKIRPCPSTNPGCVSTNPKSSSFAFPWLIPENSTDNAIQKLREAILETQKNVK 499
           L++GLENGKIR CPS NPGC+S+NPKSSSFAFPWLIPENS DN IQKLREAIL+TQKNVK
Sbjct: 73  LKVGLENGKIRTCPSINPGCISSNPKSSSFAFPWLIPENSLDNPIQKLREAILKTQKNVK 132

Query: 498 FQLVEDTPDGQYLQAEVDGRFDRDVLEFLVKGDVVAFRCMAAKVTYVYPFTTALGDSKGQ 319
           F LVEDTPDGQY+QAEVD  FDRDVLEFLVKG+VVA+RCMA KVTYVYPFTTA GDSKGQ
Sbjct: 133 FLLVEDTPDGQYMQAEVDAGFDRDVLEFLVKGEVVAYRCMATKVTYVYPFTTAFGDSKGQ 192

Query: 318 EARLKQINDQLGWYAPSFDSME 253
           EARLKQINDQLGWYAPSFDSME
Sbjct: 193 EARLKQINDQLGWYAPSFDSME 214


>ref|XP_002322266.1| predicted protein [Populus trichocarpa] gi|222869262|gb|EEF06393.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  277 bits (708), Expect = 3e-72
 Identities = 132/165 (80%), Positives = 149/165 (90%)
 Frame = -3

Query: 747 AIPSLNSQSPPTSLTTPFSQSKNLQLGLENGKIRPCPSTNPGCVSTNPKSSSFAFPWLIP 568
           AIPSLNSQ P  S TTPFSQSKNLQ+GLENGKIRPCPSTNPGCVSTNP+SSSF+FPW IP
Sbjct: 52  AIPSLNSQPPLLSPTTPFSQSKNLQIGLENGKIRPCPSTNPGCVSTNPQSSSFSFPWRIP 111

Query: 567 ENSTDNAIQKLREAILETQKNVKFQLVEDTPDGQYLQAEVDGRFDRDVLEFLVKGDVVAF 388
           EN T+NAIQKL EAIL+TQ+N K Q++EDTP+G+YLQAEVDG FD DVLEFLV+GDVVA+
Sbjct: 112 ENDTENAIQKLEEAILKTQRNAKIQVIEDTPNGKYLQAEVDGGFDPDVLEFLVRGDVVAY 171

Query: 387 RCMAAKVTYVYPFTTALGDSKGQEARLKQINDQLGWYAPSFDSME 253
           R MA KVTYVYPFTTA GDSKGQE R+K+I ++LGWYAPSFDSM+
Sbjct: 172 RTMATKVTYVYPFTTAFGDSKGQEERMKKILNELGWYAPSFDSMD 216


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