BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012253
         (1657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...   751   0.0  
ref|XP_003630096.1| Pentatricopeptide repeat-containing protein ...   749   0.0  
ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containi...   745   0.0  
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   674   0.0  
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   672   0.0  

>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Glycine max]
          Length = 503

 Score =  751 bits (1939), Expect = 0.0
 Identities = 385/494 (77%), Positives = 421/494 (85%), Gaps = 29/494 (5%)
 Frame = +3

Query: 156  ALLTRISCGGSGATRSKREKKTSDQSETRELVRLLKQKIS-DKEPLVKTLSKYVKLVRTE 332
            A L+RISCG     R KR KK++  SE +ELVRLL  KIS DKEPL+KTL+KYVK VRT+
Sbjct: 20   APLSRISCGA----RPKR-KKSNHNSEAQELVRLLTSKISNDKEPLLKTLNKYVKQVRTQ 74

Query: 333  HCFLLFEELGKDDKWLQCIEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRLAMWLFSE 512
            HCFLLFEEL K D WLQC+EVFRWMQKQRWYIADNG+YSKLISVMGKKGQTR+AMWLFSE
Sbjct: 75   HCFLLFEELAKHDNWLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSE 134

Query: 513  MRNTGCRPDTSVYNSLISAHLHSRDKKKALAKALGYFEKMKGYERCKPNIVTYNILLRAF 692
            MRNTGCRPDTSVYN+LI+AHLHSRDK KALAKA+GYF+KMKG ERCKPNIVTYNILLRAF
Sbjct: 135  MRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAF 194

Query: 693  AQARNVEGVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMESVLARMKSNRCKPDL 872
            AQARNVE VNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREME+VLARMKSN+CKPDL
Sbjct: 195  AQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDL 254

Query: 873  ITYNLLIDAYGKKQQFDKMEQVFKSLLHSKEKPTLPTFNSMILNYGKARLKDKAENVFKK 1052
            IT+NLLID+YGKKQ+F KMEQVFKSLL SKE+ +LPTFNSMILNYGKARLKDKAE+VFK+
Sbjct: 255  ITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFKR 314

Query: 1053 MTDMGYTPSFVTHESLIYMFGFCDCVSKAVELFDGLVESKVPVKVSTLNAMLDVYCINGL 1232
            MTDMGYTPSFVTHESLIYM+GFCDCVS+A +LFD LVESK  +KVSTLNAMLDVYCINGL
Sbjct: 315  MTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCINGL 374

Query: 1233 PQEADSLFQRARSIKIFPDASTYKLLYKAYTKANSKELLDKLLKHMDKVGIIPNKRFFLD 1412
            PQEADSLF+RA SIKI+PD+ST+KLLYKAYTKAN KELLDKLLKHMDK GI+PNKRFFLD
Sbjct: 375  PQEADSLFERANSIKIYPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVPNKRFFLD 434

Query: 1413 ALGAIESLPA----------------------------NSGSANAETASNSPQDLVKNQL 1508
            ALGA+ SLPA                            NS SANA T SN+PQ+  K   
Sbjct: 435  ALGAVASLPANSESANAATDSKTANSESANAATDSNTSNSKSANAATDSNNPQEFSK--- 491

Query: 1509 ET*LAIHTKNLLAH 1550
               LA H KN+LAH
Sbjct: 492  ---LATHVKNILAH 502


>ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355524118|gb|AET04572.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 635

 Score =  749 bits (1933), Expect = 0.0
 Identities = 380/448 (84%), Positives = 403/448 (89%)
 Frame = +3

Query: 144  PSHVALLTRISCGGSGATRSKREKKTSDQSETRELVRLLKQKISDKEPLVKTLSKYVKLV 323
            P ++ + TRISC  S  TR  R K+T+DQSET+ELVRLL +KISDKEPL+KTL+KYVKLV
Sbjct: 22   PPYITIPTRISCV-SNPTRINR-KQTTDQSETQELVRLLTRKISDKEPLLKTLNKYVKLV 79

Query: 324  RTEHCFLLFEELGKDDKWLQCIEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRLAMWL 503
            RTEHCFLLFEELGK DKWLQC+EVFRWMQ+QRWYIADNGVYSKLISVMGKKGQ RLAMWL
Sbjct: 80   RTEHCFLLFEELGKHDKWLQCLEVFRWMQRQRWYIADNGVYSKLISVMGKKGQIRLAMWL 139

Query: 504  FSEMRNTGCRPDTSVYNSLISAHLHSRDKKKALAKALGYFEKMKGYERCKPNIVTYNILL 683
            FSEMRNTGCRPDTSVYNSLISAHLHSRDK KAL KALGYFEKMK  ERCKPNIVTYNILL
Sbjct: 140  FSEMRNTGCRPDTSVYNSLISAHLHSRDKSKALVKALGYFEKMKTTERCKPNIVTYNILL 199

Query: 684  RAFAQARNVEGVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMESVLARMKSNRCK 863
            RAFAQAR+V  VN LFKDLDES VSPDIYTFNGVMD YGKNGMIREMESVL RMKSN+ K
Sbjct: 200  RAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIREMESVLVRMKSNQVK 259

Query: 864  PDLITYNLLIDAYGKKQQFDKMEQVFKSLLHSKEKPTLPTFNSMILNYGKARLKDKAENV 1043
             DLITYNLLID+YGKKQQFDKMEQVFKSL  SKEKPTLPTFNSMILNYGKARLKDKAENV
Sbjct: 260  LDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDKAENV 319

Query: 1044 FKKMTDMGYTPSFVTHESLIYMFGFCDCVSKAVELFDGLVESKVPVKVSTLNAMLDVYCI 1223
            F+ MTDMGYTPSFVTHESLI+M+G C CVS AVELFD L+ESKVP+KVSTLNAMLDVYCI
Sbjct: 320  FQNMTDMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLDVYCI 379

Query: 1224 NGLPQEADSLFQRARSIKIFPDASTYKLLYKAYTKANSKELLDKLLKHMDKVGIIPNKRF 1403
            NGL QEADSLF RA+SIKIFPDA+TYKLLYKAYTKANSKELLDKLLK MDK  +IPNKRF
Sbjct: 380  NGLQQEADSLFTRAKSIKIFPDATTYKLLYKAYTKANSKELLDKLLKQMDKDSVIPNKRF 439

Query: 1404 FLDALGAIESLPANSGSANAETASNSPQ 1487
            FLDALGAI S    SGSANA T S+ PQ
Sbjct: 440  FLDALGAIGSSTEKSGSANAGTGSSRPQ 467


>ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Glycine max]
          Length = 580

 Score =  745 bits (1923), Expect = 0.0
 Identities = 373/444 (84%), Positives = 407/444 (91%), Gaps = 2/444 (0%)
 Frame = +3

Query: 156  ALLTRISCGGSGATRSKREKKTSDQSETRELVRLLKQKI--SDKEPLVKTLSKYVKLVRT 329
            A L+RISCGG    R  + KK++  SE +ELVRLL  KI  +DKE L+KTL+KYVK VRT
Sbjct: 80   APLSRISCGGP---RPPKSKKSNLNSEAQELVRLLTSKIRSNDKEVLLKTLNKYVKQVRT 136

Query: 330  EHCFLLFEELGKDDKWLQCIEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRLAMWLFS 509
            +HCFLLFEELGK D WLQC+EVFRWMQKQRWYIADNG+YSKLISVMGKKGQTR+AMWLFS
Sbjct: 137  QHCFLLFEELGKHDNWLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFS 196

Query: 510  EMRNTGCRPDTSVYNSLISAHLHSRDKKKALAKALGYFEKMKGYERCKPNIVTYNILLRA 689
            EMRNTGCRPDTSVYN+LI+AHL SRDK KALAKA+GYF+KMKG ERCKPNIVTYNILLRA
Sbjct: 197  EMRNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYFQKMKGMERCKPNIVTYNILLRA 256

Query: 690  FAQARNVEGVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMESVLARMKSNRCKPD 869
            FAQARNVE VNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREME+VLARMKSN+CKPD
Sbjct: 257  FAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPD 316

Query: 870  LITYNLLIDAYGKKQQFDKMEQVFKSLLHSKEKPTLPTFNSMILNYGKARLKDKAENVFK 1049
            LIT+NLLID+YGKKQ F KMEQVFKSLLHSKE+P+LPTFNSMILNYGKARLKDKAE+VFK
Sbjct: 317  LITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMILNYGKARLKDKAEDVFK 376

Query: 1050 KMTDMGYTPSFVTHESLIYMFGFCDCVSKAVELFDGLVESKVPVKVSTLNAMLDVYCING 1229
            KMTDMGYT SFVTHES+IYM+GFCDCVS+A +LFD LVESKV +KVSTLNAMLDVYC+NG
Sbjct: 377  KMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLFDELVESKVHIKVSTLNAMLDVYCLNG 436

Query: 1230 LPQEADSLFQRARSIKIFPDASTYKLLYKAYTKANSKELLDKLLKHMDKVGIIPNKRFFL 1409
            LPQEADSLF+RA SIKI PD+ST+KLLYKAYTKAN KELLDKLLKHMDK GIIPNKRFFL
Sbjct: 437  LPQEADSLFERAISIKIHPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIIPNKRFFL 496

Query: 1410 DALGAIESLPANSGSANAETASNS 1481
            DALGA+ SLPANS SANA T SN+
Sbjct: 497  DALGAVASLPANSESANAATDSNT 520


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  674 bits (1740), Expect = 0.0
 Identities = 332/439 (75%), Positives = 390/439 (88%), Gaps = 4/439 (0%)
 Frame = +3

Query: 165  TRISCGGSGATRSKREK-KTSDQSETRELVR-LLKQKISDKEPLVKTLSKYVKLVRTEHC 338
            T I+C    +TR ++++   S++SET +LVR +L+   SDK PLV+TL KYV++VRTEHC
Sbjct: 43   THITCV---STRPRKKRFPISEESETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHC 99

Query: 339  FLLFEELGKDDKWLQCIEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRLAMWLFSEMR 518
            FLLFEELG+ DKWLQC+EVFRWMQKQRWYIAD+GVYSKLISVMGKKGQTR+AMWLFSEMR
Sbjct: 100  FLLFEELGRRDKWLQCLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMR 159

Query: 519  NTGCRPDTSVYNSLISAHLHSRDKKKALAKALGYFEKMKGYERCKPNIVTYNILLRAFAQ 698
            N+GCRPD+SVYN+LI+AHLHS+DK KAL KALGYFEKMKG +RC+PN+VTYNILLRAFAQ
Sbjct: 160  NSGCRPDSSVYNALITAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQ 219

Query: 699  ARNVEGVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMESVLARMKSNRCKPDLIT 878
            ARNV  VN+LFKDLD+SIVSPDIYT+NGVMDAYGKNGMIREMESVL+RMKSN+CKPD+IT
Sbjct: 220  ARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIIT 279

Query: 879  YNLLIDAYGKKQQFDKMEQVFKSLLHSKEKPTLPTFNSMILNYGKARLKDKAENVFKKMT 1058
            +NLLID+YGKKQ FDKMEQVFKSLLHSKE+PTLPTFNSMI NYGKAR K+ AE+V +KMT
Sbjct: 280  FNLLIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMT 339

Query: 1059 DMGYTPSFVTHESLIYMFGFCDCVSKAVELFDGLVESKVPVKVSTLNAMLDVYCINGLPQ 1238
             M YTP+F+T+ESLI M+GFCD VSKA E+FD ++ES   VKVSTLNAMLDVYC+NGLP 
Sbjct: 340  KMKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPM 399

Query: 1239 EADSLFQRARSIKIFPDASTYKLLYKAYTKANSKELLDKLLKHMDKVGIIPNKRFFLDAL 1418
            EAD LF  AR++ + PD++TYKLLYKAYTKAN K+L+ KLLKHMD+ GIIPNKRFFLDAL
Sbjct: 400  EADLLFDNARNVGLLPDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDAL 459

Query: 1419 GAIESLPANSGSA--NAET 1469
            GA +SLPA+SG+   NA+T
Sbjct: 460  GAFKSLPASSGNQQNNAKT 478


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Vitis vinifera]
            gi|296082481|emb|CBI21486.3| unnamed protein product
            [Vitis vinifera]
          Length = 489

 Score =  672 bits (1735), Expect = 0.0
 Identities = 327/445 (73%), Positives = 382/445 (85%)
 Frame = +3

Query: 165  TRISCGGSGATRSKREKKTSDQSETRELVRLLKQKISDKEPLVKTLSKYVKLVRTEHCFL 344
            T +SC  +   R    K   D+SE  ELVR+L +    + PL+ TL+KYVK++RTEHCF 
Sbjct: 46   TVVSCVSTRPRRKPGPKP--DKSEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFR 103

Query: 345  LFEELGKDDKWLQCIEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRLAMWLFSEMRNT 524
            LFEELGK DKWLQC+EVFRWMQKQRWYIADNGVYSKLISVMGKKGQTR+AMWLFSEMRN+
Sbjct: 104  LFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNS 163

Query: 525  GCRPDTSVYNSLISAHLHSRDKKKALAKALGYFEKMKGYERCKPNIVTYNILLRAFAQAR 704
            GCRPDTSVYN+LI+AHLHSRDK KAL KALGYF+KMKG ERCKPNIVTYNILLRAFAQA+
Sbjct: 164  GCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQ 223

Query: 705  NVEGVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMESVLARMKSNRCKPDLITYN 884
            NV   N+LFK+L+ESIVSPDI+TFNGVMDAYGKNGMI+EMESVL+RMKSN+CKPD+IT+N
Sbjct: 224  NVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 283

Query: 885  LLIDAYGKKQQFDKMEQVFKSLLHSKEKPTLPTFNSMILNYGKARLKDKAENVFKKMTDM 1064
            +LID+YG++Q+FDKMEQVFKSLL SKEKPTLPTFNSMI NYGKARLK+KAENVFKKMTDM
Sbjct: 284  VLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDM 343

Query: 1065 GYTPSFVTHESLIYMFGFCDCVSKAVELFDGLVESKVPVKVSTLNAMLDVYCINGLPQEA 1244
            GY P+F+T+ESLI M+GFCDC+S+A E+FD ++ SK  +KVSTLNAML+VYC+NGLP EA
Sbjct: 344  GYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEA 403

Query: 1245 DSLFQRARSIKIFPDASTYKLLYKAYTKANSKELLDKLLKHMDKVGIIPNKRFFLDALGA 1424
            D L +RAR  + FP +STYKLLYKAYTKA+ KELL+KLLK MD  GI+PNKRFFL+ALGA
Sbjct: 404  DLLLERARKNRPFPGSSTYKLLYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGA 463

Query: 1425 IESLPANSGSANAETASNSPQDLVK 1499
              S PA+  SA + T    P++  K
Sbjct: 464  FGSSPASQESAGSTTGLTRPRNSAK 488