BLASTX nr result

ID: Glycyrrhiza23_contig00012252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012252
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR...   390   e-106
ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like prot...   374   e-101
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   273   6e-71
ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   250   3e-64
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              250   3e-64

>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 619

 Score =  390 bits (1001), Expect = e-106
 Identities = 192/240 (80%), Positives = 213/240 (88%), Gaps = 1/240 (0%)
 Frame = -1

Query: 937  IPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALRLSYLFTKLCSILKIFPVVTESG 758
            IPSAI+YLNNHFFAPVD+EIPD+ATV +G+IHG+ ALRLSYLF KLCSILKI P VTESG
Sbjct: 380  IPSAISYLNNHFFAPVDLEIPDQATVKEGKIHGLTALRLSYLFMKLCSILKISPNVTESG 439

Query: 757  NKHLAPELEDFTNVFHPFSANIQEACND-DVGVWTNNTRKVSCEHLVFLWGFKFGMTAGM 581
            NKHLAPELEDFTNVFHPFS  IQ++ N  DVG+WTNNT+KVSCEHLVFLWGFK G+TAGM
Sbjct: 440  NKHLAPELEDFTNVFHPFSTPIQDSFNGGDVGMWTNNTKKVSCEHLVFLWGFKIGITAGM 499

Query: 580  LKSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDFLDVMNSEEISGGLKELVADGT 401
            LKS+L +SHDIFS +FDVKLVDKSCAIVVFWQ G+SK FLD++NSEEI G LKELV+DG 
Sbjct: 500  LKSLLRSSHDIFSREFDVKLVDKSCAIVVFWQSGVSKRFLDILNSEEIRGDLKELVSDGM 559

Query: 400  RVSCYETYRTMCRLGLWEMDLAESLERALESSRRDTEIDSGRKSSEIHWCNDNVINLDDL 221
            RV+ YETY T+CRLGLWEMDLAESLERALESS  D E +  RKSSEIHW NDNVINLDDL
Sbjct: 560  RVTSYETYNTICRLGLWEMDLAESLERALESSCCDIESNCERKSSEIHWYNDNVINLDDL 619


>ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like protein [Medicago
           truncatula] gi|355497742|gb|AES78945.1| Poly(A)-specific
           ribonuclease PARN-like protein [Medicago truncatula]
          Length = 513

 Score =  374 bits (960), Expect = e-101
 Identities = 183/240 (76%), Positives = 209/240 (87%), Gaps = 1/240 (0%)
 Frame = -1

Query: 937 IPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALRLSYLFTKLCSILKIFPVVTESG 758
           I +A++Y+N HF A V+MEIPD+ T+NKG+I G++ALRLSYLF KLCS+LKI PVVTESG
Sbjct: 275 IRNALSYMNTHFLALVEMEIPDQDTINKGKIDGLDALRLSYLFMKLCSVLKISPVVTESG 334

Query: 757 NKHLAPELEDFTNVFHPFSANIQEA-CNDDVGVWTNNTRKVSCEHLVFLWGFKFGMTAGM 581
           N+ LAP+LEDFTNVFH  SANIQE+ CN+DV VWTNNTRK +CEHLVFLWGFKFGMTAGM
Sbjct: 335 NRQLAPQLEDFTNVFHSCSANIQESSCNEDVSVWTNNTRKANCEHLVFLWGFKFGMTAGM 394

Query: 580 LKSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDFLDVMNSEEISGGLKELVADGT 401
           LKSVL  SHDIF  +FDVK VDKSCA VVFW+PGLSKDFL+VMN E+ISGGLKELV+DG 
Sbjct: 395 LKSVLRESHDIFLEEFDVKFVDKSCAFVVFWEPGLSKDFLNVMNDEQISGGLKELVSDGL 454

Query: 400 RVSCYETYRTMCRLGLWEMDLAESLERALESSRRDTEIDSGRKSSEIHWCNDNVINLDDL 221
           RV+ YETYRTMCRLGLWE+DLAESLE++LE S  DT+I S RK  EI WCNDNVINLDDL
Sbjct: 455 RVTGYETYRTMCRLGLWEIDLAESLEKSLECSLNDTDIHSERK-PEIPWCNDNVINLDDL 513


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1|
            ribonuclease, putative [Ricinus communis]
          Length = 624

 Score =  273 bits (697), Expect = 6e-71
 Identities = 131/240 (54%), Positives = 175/240 (72%), Gaps = 1/240 (0%)
 Frame = -1

Query: 937  IPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALRLSYLFTKLCSILKIFPVVTESG 758
            IP A +YL N FFAPVDMEIP  A VN+G+IHG N +R+  LF KLC ILK+ P   +S 
Sbjct: 385  IPMATSYLKNWFFAPVDMEIPFPAMVNEGKIHGHNVMRICQLFAKLCYILKLAPNSIQSN 444

Query: 757  NKHLAPELEDFTNVFHPFSANIQEACNDDVGVWTNNTRKVSCEHLVFLWGFKFGMTAGML 578
             K+LA  +E + N+F P+    QE  ++DV +WTNNTRKVSC+ LVFLWGF++ M+AGML
Sbjct: 445  EKNLASAIEAYVNIFSPYFPGPQEPTDEDVRIWTNNTRKVSCQDLVFLWGFRYRMSAGML 504

Query: 577  KSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDFLDVM-NSEEISGGLKELVADGT 401
            KS+L  SH +FS +FDV+ VDKSCAIVVFW+PGLS   LDV+  S EI G L+E+V++G 
Sbjct: 505  KSLLQQSHKVFSEEFDVRFVDKSCAIVVFWEPGLSNTLLDVLKGSSEIVGPLREMVSEGV 564

Query: 400  RVSCYETYRTMCRLGLWEMDLAESLERALESSRRDTEIDSGRKSSEIHWCNDNVINLDDL 221
            R + Y+TY  +CRLGLW  +LA+SL++AL  +   ++ DS   SS  +WC++ +INLD+L
Sbjct: 565  RAASYDTYNRVCRLGLWHENLADSLDKALADTDHPSDSDSVTSSSNTYWCHEWMINLDEL 624


>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  250 bits (639), Expect = 3e-64
 Identities = 123/242 (50%), Positives = 172/242 (71%), Gaps = 3/242 (1%)
 Frame = -1

Query: 937 IPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALRLSYLFTKLCSILKIFPVVTESG 758
           + +A + L   FF P+DMEIP +A+ N+ +IHG N L++S+L   LCSILKI P + +S 
Sbjct: 275 LSAAASCLKRRFFVPIDMEIPHQAS-NEDKIHGHNVLKISHLLANLCSILKITPEMIQSD 333

Query: 757 NKHLAPELEDFTNVFHPFSANIQEACNDDVGVWTNNTRKVSCEHLVFLWGFKFGMTAGML 578
             HLA  LE + N+FHP S N ++  +  + VWT++TRKVS E LVF+WGF+  M+AG L
Sbjct: 334 GGHLASALEGYANIFHPHSTNTEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGL 393

Query: 577 KSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDFLDVMNSEEISGGLKELVADGTR 398
           K +L  SH +FS +FDV++VD SCAIVVFWQ GLS+ FL+ ++S  ISG L+E+V++G R
Sbjct: 394 KRLLQGSHSVFSEEFDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWISGLLREMVSEGLR 453

Query: 397 VSCYETYRTMCRLGLWEMDLAESLERALESSRRDTEIDSGRK---SSEIHWCNDNVINLD 227
            + YETY+  CRLG WE DLA+SL++ALE    ++E DS  K    S+I+W  D++INLD
Sbjct: 454 AAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIYWSRDSIINLD 513

Query: 226 DL 221
           +L
Sbjct: 514 EL 515


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  250 bits (639), Expect = 3e-64
 Identities = 123/242 (50%), Positives = 172/242 (71%), Gaps = 3/242 (1%)
 Frame = -1

Query: 937  IPSAITYLNNHFFAPVDMEIPDRATVNKGEIHGINALRLSYLFTKLCSILKIFPVVTESG 758
            + +A + L   FF P+DMEIP +A+ N+ +IHG N L++S+L   LCSILKI P + +S 
Sbjct: 6218 LSAAASCLKRRFFVPIDMEIPHQAS-NEDKIHGHNVLKISHLLANLCSILKITPEMIQSD 6276

Query: 757  NKHLAPELEDFTNVFHPFSANIQEACNDDVGVWTNNTRKVSCEHLVFLWGFKFGMTAGML 578
              HLA  LE + N+FHP S N ++  +  + VWT++TRKVS E LVF+WGF+  M+AG L
Sbjct: 6277 GGHLASALEGYANIFHPHSTNTEDPIDGGIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGL 6336

Query: 577  KSVLGTSHDIFSGDFDVKLVDKSCAIVVFWQPGLSKDFLDVMNSEEISGGLKELVADGTR 398
            K +L  SH +FS +FDV++VD SCAIVVFWQ GLS+ FL+ ++S  ISG L+E+V++G R
Sbjct: 6337 KRLLQGSHSVFSEEFDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWISGLLREMVSEGLR 6396

Query: 397  VSCYETYRTMCRLGLWEMDLAESLERALESSRRDTEIDSGRK---SSEIHWCNDNVINLD 227
             + YETY+  CRLG WE DLA+SL++ALE    ++E DS  K    S+I+W  D++INLD
Sbjct: 6397 AAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIYWSRDSIINLD 6456

Query: 226  DL 221
            +L
Sbjct: 6457 EL 6458


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