BLASTX nr result

ID: Glycyrrhiza23_contig00012227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012227
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242472.1| uncharacterized protein LOC100800402 [Glycin...   410   e-112
ref|XP_003590890.1| F-box protein PP2-B1 [Medicago truncatula] g...   403   e-110
ref|XP_003590891.1| F-box family-like protein [Medicago truncatu...   393   e-107
gb|ACU23045.1| unknown [Glycine max]                                  381   e-103
ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula] g...   380   e-103

>ref|NP_001242472.1| uncharacterized protein LOC100800402 [Glycine max]
            gi|255632332|gb|ACU16524.1| unknown [Glycine max]
          Length = 254

 Score =  410 bits (1053), Expect = e-112
 Identities = 202/256 (78%), Positives = 222/256 (86%)
 Frame = -1

Query: 1022 MEFQALPEGCIAAILSRTTPVDACRFSVVSKAFRSAAESDSVWERFLPSDYSDLISLSPS 843
            MEFQ LPEGCIA+ILSRTTP D CRFSVVSK FRS AESD+VW+RFLPSDY  +IS SPS
Sbjct: 1    MEFQGLPEGCIASILSRTTPADVCRFSVVSKIFRSTAESDAVWKRFLPSDYHSIISQSPS 60

Query: 842  LANAPSKKALYLALSDRPIIIDQGKKSFQLDRKSGKKCYMLAARALTIIWGDTEHYWSWT 663
              N PSKK LYLALSDRPIIIDQGKKSFQL++KSGKKCYMLAARAL+IIWGDTE YW+WT
Sbjct: 61   PLNYPSKKELYLALSDRPIIIDQGKKSFQLEKKSGKKCYMLAARALSIIWGDTEQYWNWT 120

Query: 662  AMPESRFPEVAQLRDVCWLEIRGMINTIALSPNTQYAAYLVFKMIDARGFRNRPVELSVG 483
                SRFPEVA+LRDVCWLEIRG++NT+ LSPNTQYAAYLVFKMIDARGF NRPVELSV 
Sbjct: 121  TDTNSRFPEVAELRDVCWLEIRGVLNTLVLSPNTQYAAYLVFKMIDARGFHNRPVELSVN 180

Query: 482  TLCGNSSTKNVCLDPNMEGTNNRVEGLQRPSVRSSDSWLEIEMGEFFNSGLEDEEVQLSV 303
               G+ STK VCLDPN E  + RVEGLQRP+ R SD WLEIEMGEFFN+GL D+EVQ+SV
Sbjct: 181  VFGGHGSTKIVCLDPNEELPHRRVEGLQRPNAR-SDGWLEIEMGEFFNTGL-DDEVQMSV 238

Query: 302  LEIKGGNWKSGLFLEG 255
            +E KGGNWKSGLF+EG
Sbjct: 239  VETKGGNWKSGLFIEG 254


>ref|XP_003590890.1| F-box protein PP2-B1 [Medicago truncatula]
            gi|355479938|gb|AES61141.1| F-box protein PP2-B1
            [Medicago truncatula]
          Length = 265

 Score =  403 bits (1036), Expect = e-110
 Identities = 201/264 (76%), Positives = 229/264 (86%), Gaps = 3/264 (1%)
 Frame = -1

Query: 1019 EFQALPEGCIAAILSRTTPVDACRFSVVSKAFRSAAESDSVWERFLPSDYSDLISLSPSL 840
            E Q LPEGCIA I+SRTTPVDA R SVVSK FRSA++SD+VW +FLPSD S +IS SPSL
Sbjct: 3    EIQDLPEGCIATIVSRTTPVDAGRLSVVSKTFRSASDSDAVWNQFLPSDISSVISHSPSL 62

Query: 839  ANAPSKKALYLALSDRPIIIDQGKKSFQLDRKSGKKCYMLAARALTIIWGDTEHYWSWTA 660
            ANAP+KKALYLALSDRPIIID  KKSFQLDRKSGKKCYML+AR+L I+WGDT+HYW+W  
Sbjct: 63   ANAPTKKALYLALSDRPIIIDHDKKSFQLDRKSGKKCYMLSARSLAIVWGDTKHYWNWIP 122

Query: 659  MPESRFPEVAQLRDVCWLEIRGMINTIALSPNTQYAAYLVFKMIDARGFRNRPVELSVGT 480
            +P+SRFPEVA+L DVCWLEIRG+INTI LSP TQYAAY+VFKMIDA GF+NRPV+LSV  
Sbjct: 123  LPDSRFPEVAKLVDVCWLEIRGVINTIVLSPYTQYAAYVVFKMIDAWGFQNRPVDLSVCV 182

Query: 479  LCGNSSTKNVCLDPNME---GTNNRVEGLQRPSVRSSDSWLEIEMGEFFNSGLEDEEVQL 309
              G SSTK VCLDPN+E     +NR  GLQRPSVR SD WLEIEMGEFF+SG+E+EEVQ+
Sbjct: 183  EGGQSSTKIVCLDPNVEEEGRQHNRAVGLQRPSVR-SDGWLEIEMGEFFSSGIENEEVQM 241

Query: 308  SVLEIKGGNWKSGLFLEGIEVRPK 237
            ++LEIK GNWKSGLFLEGIE+RPK
Sbjct: 242  NLLEIKAGNWKSGLFLEGIEIRPK 265


>ref|XP_003590891.1| F-box family-like protein [Medicago truncatula]
            gi|355479939|gb|AES61142.1| F-box family-like protein
            [Medicago truncatula]
          Length = 341

 Score =  393 bits (1010), Expect = e-107
 Identities = 197/282 (69%), Positives = 232/282 (82%), Gaps = 3/282 (1%)
 Frame = -1

Query: 1019 EFQALPEGCIAAILSRTTPVDACRFSVVSKAFRSAAESDSVWERFLPSDYSDLISLSPSL 840
            E Q LPEGCIAAI+SRTTP+DA R SV SK FRSA++SD+VW +FLPSD S +IS SPSL
Sbjct: 3    EIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSL 62

Query: 839  ANAPSKKALYLALSDRPIIIDQGKKSFQLDRKSGKKCYMLAARALTIIWGDTEHYWSWTA 660
             N P+KK LYLALSDRP+IID  KKS QL+RKSGKKCYML+AR+L I+WGD   YW+W +
Sbjct: 63   TNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWIS 122

Query: 659  MPESRFPEVAQLRDVCWLEIRGMINTIALSPNTQYAAYLVFKMIDARGFRNRPVELSVGT 480
            MP+SRFPEVA+L DVCWLEI G+INTI LSPNTQYAAY+VFKMI+A GF+NRP +LSVG 
Sbjct: 123  MPDSRFPEVAKLVDVCWLEIHGVINTIVLSPNTQYAAYVVFKMINASGFQNRPADLSVGV 182

Query: 479  LCGNSSTKNVCLDPNMEG---TNNRVEGLQRPSVRSSDSWLEIEMGEFFNSGLEDEEVQL 309
              G SSTK VCLDPN+EG    ++RV+GLQRPSVR SD WLEIEMGEFFNSG+E+EEVQ+
Sbjct: 183  EGGQSSTKIVCLDPNVEGRPQLHDRVDGLQRPSVR-SDGWLEIEMGEFFNSGIENEEVQM 241

Query: 308  SVLEIKGGNWKSGLFLEGIEVRPKEDN*AIKDLV*FNSLNYA 183
            +V++ KGGNWK GL LEGIEVRPK +       +  +SLNYA
Sbjct: 242  NVIQTKGGNWKRGLVLEGIEVRPKYNT------INQHSLNYA 277


>gb|ACU23045.1| unknown [Glycine max]
          Length = 243

 Score =  381 bits (978), Expect = e-103
 Identities = 188/240 (78%), Positives = 209/240 (87%)
 Frame = -1

Query: 947 FSVVSKAFRSAAESDSVWERFLPSDYSDLISLSPSLANAPSKKALYLALSDRPIIIDQGK 768
           FSVVSK FRSAAESD+VW+RFLPSDY  +IS SPS  N PSKK LYLALSDRPIIIDQGK
Sbjct: 6   FSVVSKIFRSAAESDAVWKRFLPSDYHSIISQSPSPLNYPSKKELYLALSDRPIIIDQGK 65

Query: 767 KSFQLDRKSGKKCYMLAARALTIIWGDTEHYWSWTAMPESRFPEVAQLRDVCWLEIRGMI 588
           KSFQL++KSGKKCYMLAAR L+IIWGDTE YW+WT    SRFPEVA+LRDVCWLEIRG++
Sbjct: 66  KSFQLEKKSGKKCYMLAARVLSIIWGDTEQYWNWTTDTNSRFPEVAELRDVCWLEIRGVL 125

Query: 587 NTIALSPNTQYAAYLVFKMIDARGFRNRPVELSVGTLCGNSSTKNVCLDPNMEGTNNRVE 408
           NT+ LSPNTQYAAYLVFKMIDARGF NRPVELSV    G+ STK VCLDPN E  + RVE
Sbjct: 126 NTLVLSPNTQYAAYLVFKMIDARGFHNRPVELSVNVFGGHGSTKIVCLDPNEELPHRRVE 185

Query: 407 GLQRPSVRSSDSWLEIEMGEFFNSGLEDEEVQLSVLEIKGGNWKSGLFLEGIEVRPKEDN 228
           GLQRP+ R SD WLEIEMGEFFN+GL D+EVQ+SV+E KGGNWKSGLF+EGIEV+PKE+N
Sbjct: 186 GLQRPNAR-SDGWLEIEMGEFFNTGL-DDEVQMSVVETKGGNWKSGLFIEGIEVKPKEEN 243


>ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula]
            gi|355479928|gb|AES61131.1| F-box protein PP2-B1
            [Medicago truncatula]
          Length = 275

 Score =  380 bits (977), Expect = e-103
 Identities = 192/273 (70%), Positives = 221/273 (80%), Gaps = 10/273 (3%)
 Frame = -1

Query: 1016 FQALPEGCIAAILSRTTPVDACRFSVVSKAFRSAAESDSVWERFLPSDYSDLISLSPSLA 837
            F+ LPEGCIAA+LS TTPVDACR S +SK F SA++SD+VW RFLPSD S +IS  PSL+
Sbjct: 4    FEELPEGCIAAVLSSTTPVDACRLSFISKNFLSASDSDAVWNRFLPSDISSIISQFPSLS 63

Query: 836  NAPSKKALYLALSDRPIIIDQGKKSFQLDRKSGKKCYMLAARALTIIWGDTEHYWSWTAM 657
            N P+KK LY+ALSDRPIIID GKKSFQL+RKSGKKCYML+AR+L I WGDT+ YW+WT M
Sbjct: 64   NIPTKKDLYIALSDRPIIIDNGKKSFQLERKSGKKCYMLSARSLAITWGDTDQYWNWTVM 123

Query: 656  PESRFPEVAQLRDVCWLEIRGMINTIALSPNTQYAAYLVFKMIDARGFRNRPVELSVGTL 477
            PESRFPEVA+L  VCWLEIRG +NT+ALSPNT+Y  YLVFKMI+A GF   PVELSVG  
Sbjct: 124  PESRFPEVAELLHVCWLEIRGKLNTLALSPNTRYVTYLVFKMINAYGFEYFPVELSVGIE 183

Query: 476  CGNSSTKNVCL-DPNMEGTN---------NRVEGLQRPSVRSSDSWLEIEMGEFFNSGLE 327
             G+SSTK VCL DPN    +         NRV  LQRP+VR SD WLEIEMGEFF SGLE
Sbjct: 184  GGHSSTKIVCLADPNARRRHRSRIIVTEPNRVLRLQRPNVR-SDGWLEIEMGEFFISGLE 242

Query: 326  DEEVQLSVLEIKGGNWKSGLFLEGIEVRPKEDN 228
            DEEVQ+SV++IKGG+WK G F+EGIEVRPKED+
Sbjct: 243  DEEVQMSVIDIKGGHWKRGFFVEGIEVRPKEDH 275


Top