BLASTX nr result

ID: Glycyrrhiza23_contig00012224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012224
         (1779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40774.1| unknown [Lotus japonicus]                              184   5e-44
ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   181   4e-43
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-42
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   177   6e-42
ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing fac...   175   3e-41

>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  184 bits (468), Expect = 5e-44
 Identities = 89/105 (84%), Positives = 92/105 (87%), Gaps = 2/105 (1%)
 Frame = -3

Query: 1771 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 1592
            MSRVY+GNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAF+EFDD+RDALDAIHALDG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 1591 KNGWRVELSHNSK--XXXXXXXXXXXGEDLKCYECGEPGHFAREC 1463
            KNGWRVELSHNSK             GEDLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine max]
          Length = 176

 Score =  181 bits (460), Expect = 4e-43
 Identities = 88/103 (85%), Positives = 90/103 (87%)
 Frame = -3

Query: 1771 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 1592
            MSRVY+GNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAFIEFDDRRDALDAI ALDG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 1591 KNGWRVELSHNSKXXXXXXXXXXXGEDLKCYECGEPGHFAREC 1463
            KNGWRVELSHNSK           GED KCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSK-GGGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
            predicted protein [Populus trichocarpa]
          Length = 179

 Score =  179 bits (453), Expect = 3e-42
 Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 3/106 (2%)
 Frame = -3

Query: 1771 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 1592
            MSRVY+GNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EFDDRRDA+DAI ALDG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60

Query: 1591 KNGWRVELSHNSK---XXXXXXXXXXXGEDLKCYECGEPGHFAREC 1463
            KNGWRVELSHNSK              GED KCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 184

 Score =  177 bits (450), Expect = 6e-42
 Identities = 85/109 (77%), Positives = 91/109 (83%), Gaps = 6/109 (5%)
 Frame = -3

Query: 1771 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 1592
            M+RVY+GNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EFDDRRDA+DAI ALDG
Sbjct: 1    MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60

Query: 1591 KNGWRVELSHNSK------XXXXXXXXXXXGEDLKCYECGEPGHFAREC 1463
            KNGWRVELSHNSK                 GED+KCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFAREC 109


>ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
            sativus]
          Length = 188

 Score =  175 bits (444), Expect = 3e-41
 Identities = 86/112 (76%), Positives = 91/112 (81%), Gaps = 9/112 (8%)
 Frame = -3

Query: 1771 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 1592
            M+RVYIGNLDPRV+ERDLEDEFR++GVLRSVWVARRPPGYAFIEFDDRRDALDAI ALDG
Sbjct: 1    MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 1591 KNGWRVELSHNSK---------XXXXXXXXXXXGEDLKCYECGEPGHFAREC 1463
            KNGWRVELSHNSK                    G+DLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFAREC 112


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