BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012203
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicag...   559   e-157
ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   550   e-154
ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   502   e-140
gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [A...   478   e-132
ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsi...   476   e-132

>ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
            gi|355486974|gb|AES68177.1| Formamidopyrimidine-DNA
            glycosylase [Medicago truncatula]
          Length = 424

 Score =  559 bits (1441), Expect = e-157
 Identities = 304/432 (70%), Positives = 323/432 (74%), Gaps = 28/432 (6%)
 Frame = -2

Query: 1406 MPELPEVEAARRAVEDNCVGKKIVKCVVADDPKVIDGVSRSEFEASVLGKTIVAARRKGK 1227
            MPELPEVEAARRAVE+NC+GKKI KC+VADD KVIDGVSR EFEASV+GK IVAARRKGK
Sbjct: 1    MPELPEVEAARRAVEENCIGKKITKCIVADDNKVIDGVSREEFEASVVGKKIVAARRKGK 60

Query: 1226 NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 1047
            NMWLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRSA+ DEDEWPSKYSKFFIQLDDGLEL
Sbjct: 61   NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDEDEWPSKYSKFFIQLDDGLEL 120

Query: 1046 SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 867
            SFTDKRRFARVRLLKDPTSVPPISELGPDAL + MTL+EFTE L KKKTEIKALLLDQ Y
Sbjct: 121  SFTDKRRFARVRLLKDPTSVPPISELGPDALFDFMTLDEFTERLHKKKTEIKALLLDQSY 180

Query: 866  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKA-------------- 729
            ISGIGNWVADEVLYQARIHPRQ+ASSLSGESCSTLYKCIKEVI+ A              
Sbjct: 181  ISGIGNWVADEVLYQARIHPRQIASSLSGESCSTLYKCIKEVIQFAVEVDADCSRFPLEW 240

Query: 728  --------------VEVGADSSQYPTSWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYV 591
                          VEVGADSSQYPT+WIFHSREKKPGKAFVDGK I+FITAGGRTTAYV
Sbjct: 241  LFHFRWGKKPGKISVEVGADSSQYPTNWIFHSREKKPGKAFVDGKTIEFITAGGRTTAYV 300

Query: 590  PELQKLSGSQDVKETGXXXXXXXXXXXSVNDDNNDDIEKPTEVEDENXXXXXXXXXXXXX 411
            PELQKLSGSQ +KETG           SV+DDNND         DEN             
Sbjct: 301  PELQKLSGSQVLKETG-KLRGKASKKSSVDDDNNDG-------ADENLESLKSKKGTKAG 352

Query: 410  XXXXXXXXXXXXXESXXXXXXXXXXXXXXXXNEQVEKKPGQVTNRKQAKGEKQSKKRVQG 231
                         ES                ++  +KKPG  TNRKQAKGEKQSKK VQG
Sbjct: 353  AKAKKPSKRKKTEESDDDNDGDAGTDNYDDSDQVEKKKPGSGTNRKQAKGEKQSKKSVQG 412

Query: 230  SQNGRSTRSKAK 195
            +Q+ RSTRSKAK
Sbjct: 413  NQSSRSTRSKAK 424


>ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
          Length = 399

 Score =  550 bits (1417), Expect = e-154
 Identities = 294/405 (72%), Positives = 314/405 (77%), Gaps = 1/405 (0%)
 Frame = -2

Query: 1406 MPELPEVEAARRAVEDNCVGKKIVKCVVADDPKVIDGVSRSEFEASVLGKTIVAARRKGK 1227
            MPELPEVEAARRAVE NCVGK+I KCVVADD KVI GVS S+F+ASVLGK IVAA RKGK
Sbjct: 1    MPELPEVEAARRAVEYNCVGKRITKCVVADDSKVIHGVSPSDFQASVLGKLIVAAHRKGK 60

Query: 1226 NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 1047
            NMWLQLDSPPFPSFQFGMAGAIYIKG AVT YKRSA+KDEDEWPSKYSK FI+LDDGLEL
Sbjct: 61   NMWLQLDSPPFPSFQFGMAGAIYIKGAAVTNYKRSAVKDEDEWPSKYSKIFIELDDGLEL 120

Query: 1046 SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 867
            SFTDKRRFA+VRLLKDPTSVPPISELGPDAL EPMTLE+FTESL KKKTEIKALLLDQ +
Sbjct: 121  SFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMTLEKFTESLHKKKTEIKALLLDQSF 180

Query: 866  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 687
            ISGIGNWVADEVLYQARIHPRQVASSLS ESCS L KCIKEVIEKA+EVGA+SSQYPT+W
Sbjct: 181  ISGIGNWVADEVLYQARIHPRQVASSLSNESCSNLSKCIKEVIEKAIEVGAESSQYPTNW 240

Query: 686  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXS 507
            IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGS DVKETG            
Sbjct: 241  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSLDVKETGKPNKRQASKKVR 300

Query: 506  VNDDNNDDIEKPTEVEDENXXXXXXXXXXXXXXXXXXXXXXXXXXESXXXXXXXXXXXXX 327
            V+DD     EKPT  E ++                           S             
Sbjct: 301  VDDDT----EKPTNGEVDDLGSVKSKKGTKAGAKGRKPSKKKKSGGS--DEDKDSSDVGT 354

Query: 326  XXXNEQVEKK-PGQVTNRKQAKGEKQSKKRVQGSQNGRSTRSKAK 195
               ++QVEKK PG V +RKQA GEKQS +RVQ +Q   S + KAK
Sbjct: 355  DYDSDQVEKKNPGNVASRKQAGGEKQSNRRVQSNQTSWSAKRKAK 399


>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis vinifera]
          Length = 403

 Score =  502 bits (1293), Expect = e-140
 Identities = 262/403 (65%), Positives = 305/403 (75%), Gaps = 6/403 (1%)
 Frame = -2

Query: 1406 MPELPEVEAARRAVEDNCVGKKIVKCVVADDPKVIDGVSRSEFEASVLGKTIVAARRKGK 1227
            MPELPEVEAARRAVE++CVGKKI K V+A+D KVIDGVS S+FEAS+LGKTIV+A RKGK
Sbjct: 1    MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60

Query: 1226 NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 1047
            NMWLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRSA+KD DEWPSKYSK FI+LDDGLEL
Sbjct: 61   NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120

Query: 1046 SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 867
            SFTDKRRFA+VRLL+DP SVPPISELGPDAL EPMT++EF +SL KKK  IKALLLDQ Y
Sbjct: 121  SFTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSY 180

Query: 866  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 687
            I+GIGNW+ADEVLY ARIHP QVASSL+ ESC TL++CIK+VIEKA+EVGADSSQ+P++W
Sbjct: 181  IAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVIEKAMEVGADSSQFPSNW 240

Query: 686  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXS 507
            IFHSREKKPGKAFVDGKKIDFI+AGGRTTAYVPELQKLSG+Q  K +             
Sbjct: 241  IFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQKLSGTQAAKASVKPRKQTPMRKKE 300

Query: 506  VNDDNNDD---IEKPTEVEDENXXXXXXXXXXXXXXXXXXXXXXXXXXESXXXXXXXXXX 336
             ND+++DD   +++P   E++N                          ES          
Sbjct: 301  ENDEDDDDDDALDEPASEEEKNTKRAKSKKGQNPKGGGKKPPAKRKVEESDNDSDDNDDN 360

Query: 335  XXXXXXNEQV---EKKPGQVTNRKQAKGEKQSKKRVQGSQNGR 216
                  +E     +KK  +VT  KQ K EK +KK+V+ S  G+
Sbjct: 361  NDDDDDDEDKDGDQKKAKRVTKNKQTKVEKTTKKKVEKSHKGK 403


>gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana]
          Length = 390

 Score =  478 bits (1229), Expect = e-132
 Identities = 235/319 (73%), Positives = 272/319 (85%)
 Frame = -2

Query: 1406 MPELPEVEAARRAVEDNCVGKKIVKCVVADDPKVIDGVSRSEFEASVLGKTIVAARRKGK 1227
            MPELPEVEAARRA+E+NC+GKKI + ++ADD KVI G+S S+F+ S+LGKTI++ARRKGK
Sbjct: 1    MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 1226 NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 1047
            N+WL+LDSPPFPSFQFGMAGAIYIKGVAVTKYKRSA+KD +EWPSKYSKFF++LDDGLEL
Sbjct: 61   NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 1046 SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 867
            SFTDKRRFA+VRLL +PTSV PISELGPDAL EPMT++EF ESL KKK  IK LLLDQGY
Sbjct: 121  SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 866  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 687
            ISGIGNW+ADEVLYQARIHP Q ASSLS E C  L+  IKEVIEKAVEV ADSSQ+P++W
Sbjct: 181  ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSNW 240

Query: 686  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXS 507
            IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G +D ++              
Sbjct: 241  IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYG-KDAEKAAKVRPAKRGVKPK 299

Query: 506  VNDDNNDDIEKPTEVEDEN 450
             +D + ++ E+ TE EDE+
Sbjct: 300  EDDGDGEEDEQETEKEDES 318


>ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
            gi|5903053|gb|AAD55612.1|AC008016_22 Identical to
            gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA
            glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
            comes from this gene [Arabidopsis thaliana]
            gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana]
            gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis
            thaliana] gi|332194693|gb|AEE32814.1|
            formamidopyrimidine-DNA glycosylase [Arabidopsis
            thaliana]
          Length = 390

 Score =  476 bits (1226), Expect = e-132
 Identities = 235/319 (73%), Positives = 271/319 (84%)
 Frame = -2

Query: 1406 MPELPEVEAARRAVEDNCVGKKIVKCVVADDPKVIDGVSRSEFEASVLGKTIVAARRKGK 1227
            MPELPEVEAARRA+E+NC+GKKI + ++ADD KVI G+S S+F+ S+LGKTI++ARRKGK
Sbjct: 1    MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 1226 NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 1047
            N+WL+LDSPPFPSFQFGMAGAIYIKGVAVTKYKRSA+KD +EWPSKYSKFF++LDDGLEL
Sbjct: 61   NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 1046 SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 867
            SFTDKRRFA+VRLL +PTSV PISELGPDAL EPMT++EF ESL KKK  IK LLLDQGY
Sbjct: 121  SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 866  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 687
            ISGIGNW+ADEVLYQARIHP Q ASSLS E C  L+  IKEVIEKAVEV ADSSQ+P+ W
Sbjct: 181  ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSYW 240

Query: 686  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXS 507
            IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G +D ++              
Sbjct: 241  IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYG-KDAEKAAKVRPAKRGVKPK 299

Query: 506  VNDDNNDDIEKPTEVEDEN 450
             +D + ++ E+ TE EDE+
Sbjct: 300  EDDGDGEEDEQETEKEDES 318