BLASTX nr result

ID: Glycyrrhiza23_contig00012193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012193
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote...   133   2e-29
ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like...   124   6e-27
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...   105   4e-21
emb|CBI29242.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
           truncatula] gi|355513912|gb|AES95535.1| ATP-dependent
           DNA helicase RecQ family protein expressed [Medicago
           truncatula]
          Length = 685

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/85 (72%), Positives = 77/85 (90%)
 Frame = +1

Query: 22  MESSDLVEELHNIEAEIQDVQDQIRALIERQEKLYERKSELSDILEACKESEIQFNNDAT 201
           ME+ +++EELHN+EAEI+DVQ++IRALIE+QE+LYERKSEL+ IL+ACKESE Q NN A+
Sbjct: 1   MENYEVLEELHNVEAEIEDVQEKIRALIEKQERLYERKSELNSILDACKESENQVNNAAS 60

Query: 202 PSTVENWSGPFEWDSEADDLRLNIF 276
            S VENW+G FEWDS+ADDLRLNIF
Sbjct: 61  SSAVENWNGTFEWDSQADDLRLNIF 85


>ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Glycine max]
          Length = 695

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/85 (74%), Positives = 72/85 (84%)
 Frame = +1

Query: 22  MESSDLVEELHNIEAEIQDVQDQIRALIERQEKLYERKSELSDILEACKESEIQFNNDAT 201
           ME+++++EEL NIE EIQDVQ+QIRALIERQE LYERKSELS ILEACKES  + NN A 
Sbjct: 1   MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILEACKESGNEANN-AA 59

Query: 202 PSTVENWSGPFEWDSEADDLRLNIF 276
            S  ENWSG FEWDSEADD+RLN+F
Sbjct: 60  SSAAENWSGEFEWDSEADDVRLNVF 84


>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
           vinifera]
          Length = 711

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 66/81 (81%)
 Frame = +1

Query: 34  DLVEELHNIEAEIQDVQDQIRALIERQEKLYERKSELSDILEACKESEIQFNNDATPSTV 213
           DL+EEL N+E E+QDVQDQI+ L++RQEKL+ER+SEL  +LEACK S     + A+ + V
Sbjct: 6   DLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGSGSPVKDGASVA-V 64

Query: 214 ENWSGPFEWDSEADDLRLNIF 276
           ENWSGPF+WD++ADD+R NIF
Sbjct: 65  ENWSGPFDWDAQADDVRFNIF 85


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 66/81 (81%)
 Frame = +1

Query: 34  DLVEELHNIEAEIQDVQDQIRALIERQEKLYERKSELSDILEACKESEIQFNNDATPSTV 213
           DL+EEL N+E E+QDVQDQI+ L++RQEKL+ER+SEL  +LEACK S     + A+ + V
Sbjct: 6   DLLEELFNVELELQDVQDQIKNLLDRQEKLHERQSELKTLLEACKGSGSPVKDGASVA-V 64

Query: 214 ENWSGPFEWDSEADDLRLNIF 276
           ENWSGPF+WD++ADD+R NIF
Sbjct: 65  ENWSGPFDWDAQADDVRFNIF 85


>ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|222841821|gb|EEE79368.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/85 (60%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
 Frame = +1

Query: 31  SDLVEELHNIEAEIQDVQDQIRALIERQEKLYERKSELSDILEACKES---EIQFNNDAT 201
           +D++EEL NIE EI+DVQDQI+ L+ERQEKL+ER+SEL  +LEA K S        N + 
Sbjct: 5   ADVLEELLNIETEIEDVQDQIKLLLERQEKLHERQSELKFLLEAYKASGTGNSANENASR 64

Query: 202 PSTVENWSGPFEWDSEADDLRLNIF 276
            S++E+WSG FEWDS+ADD+RLNIF
Sbjct: 65  SSSLEDWSGSFEWDSQADDVRLNIF 89


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