BLASTX nr result

ID: Glycyrrhiza23_contig00012192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012192
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630913.1| F-box protein SKIP28 [Medicago truncatula] g...   270   1e-70
ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycin...   263   1e-68
gb|AFK41645.1| unknown [Lotus japonicus]                              258   5e-67
ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   246   1e-63
gb|ACU20467.1| unknown [Glycine max]                                  246   1e-63

>ref|XP_003630913.1| F-box protein SKIP28 [Medicago truncatula]
           gi|355524935|gb|AET05389.1| F-box protein SKIP28
           [Medicago truncatula]
          Length = 320

 Score =  270 bits (689), Expect = 1e-70
 Identities = 115/139 (82%), Positives = 124/139 (89%)
 Frame = +2

Query: 11  QKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQCRGCN 190
           Q+P+YYHKRGS+S FK  ENQRIIDLE CPKCFEVRMVYDCPK DC RKE   AQCRGC 
Sbjct: 182 QQPIYYHKRGSVSAFKHNENQRIIDLEKCPKCFEVRMVYDCPKVDCNRKELCQAQCRGCI 241

Query: 191 FCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTSSDSS 370
           FCIPRCE+CG CV SEE+E+ ACGD LCLECWL+LPKCNFCNKPYCKQHTNWWCTSS+SS
Sbjct: 242 FCIPRCENCGGCVGSEELEDVACGDFLCLECWLQLPKCNFCNKPYCKQHTNWWCTSSESS 301

Query: 371 FLCKVCDENSHGYTYNDVL 427
           FLC+VCDENSHGYTY DVL
Sbjct: 302 FLCRVCDENSHGYTYTDVL 320


>ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycine max]
           gi|255635560|gb|ACU18130.1| unknown [Glycine max]
          Length = 278

 Score =  263 bits (672), Expect = 1e-68
 Identities = 110/142 (77%), Positives = 125/142 (88%)
 Frame = +2

Query: 2   QTQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQCR 181
           Q QQ+P+YYH+R S SVFK++E+ R+IDLEICP+CFEVRMVYDCPK  C R+E P A CR
Sbjct: 137 QKQQQPVYYHERCSFSVFKQEESWRLIDLEICPRCFEVRMVYDCPKEHCTRREWPLAPCR 196

Query: 182 GCNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTSS 361
           GCNFCIPRCE+CG C+ S EVEEGAC D+ CLECWL+LPKC+FCNKPYCKQHTNWWCTSS
Sbjct: 197 GCNFCIPRCENCGGCIESGEVEEGACEDIFCLECWLQLPKCSFCNKPYCKQHTNWWCTSS 256

Query: 362 DSSFLCKVCDENSHGYTYNDVL 427
           DSS +CKVCDENSHGYTY DVL
Sbjct: 257 DSSLICKVCDENSHGYTYTDVL 278


>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  258 bits (658), Expect = 5e-67
 Identities = 108/142 (76%), Positives = 119/142 (83%)
 Frame = +2

Query: 2   QTQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQCR 181
           Q  QKP YYHKRGS +VF R+ENQRIIDLE CPKCFEV MVYDCPK +C ++E P  QCR
Sbjct: 181 QQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQCR 240

Query: 182 GCNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTSS 361
           GC FCIPRCE+CG CV SEE EE AC D+LCLECWL+LPKCNFCNKPYCKQH NWWC+S 
Sbjct: 241 GCKFCIPRCENCGGCVGSEEEEEAACADILCLECWLQLPKCNFCNKPYCKQHENWWCSSL 300

Query: 362 DSSFLCKVCDENSHGYTYNDVL 427
           D  FLC+VCDE+SHGYTY DVL
Sbjct: 301 DPIFLCRVCDEHSHGYTYTDVL 322


>ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP28-like [Glycine
           max]
          Length = 313

 Score =  246 bits (629), Expect = 1e-63
 Identities = 104/142 (73%), Positives = 123/142 (86%)
 Frame = +2

Query: 2   QTQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQCR 181
           + QQ+P+YYHKR + SVFK++E++R+IDLEICP+CFEVRMVYDCPKG C R+E P A CR
Sbjct: 174 EEQQEPVYYHKRCNFSVFKQEESRRLIDLEICPRCFEVRMVYDCPKGHCTRREWPLAPCR 233

Query: 182 GCNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTSS 361
           GCNFCIP+CE+CG C+ S EVEEG C D+ CLECWL++PKC+FCNKPYCKQH N  CTSS
Sbjct: 234 GCNFCIPKCENCGGCIESGEVEEGDCEDIFCLECWLQIPKCSFCNKPYCKQHIN--CTSS 291

Query: 362 DSSFLCKVCDENSHGYTYNDVL 427
           DSS +CKVCDENSHGYTY DVL
Sbjct: 292 DSSLICKVCDENSHGYTYTDVL 313


>gb|ACU20467.1| unknown [Glycine max]
          Length = 152

 Score =  246 bits (629), Expect = 1e-63
 Identities = 104/142 (73%), Positives = 123/142 (86%)
 Frame = +2

Query: 2   QTQQKPLYYHKRGSLSVFKRKENQRIIDLEICPKCFEVRMVYDCPKGDCKRKECPHAQCR 181
           + QQ+P+YYHKR + SVFK++E++R+IDLEICP+CFEVRMVYDCPKG C R+E P A CR
Sbjct: 13  EEQQEPVYYHKRCNFSVFKQEESRRLIDLEICPRCFEVRMVYDCPKGHCTRREWPLAPCR 72

Query: 182 GCNFCIPRCEDCGRCVVSEEVEEGACGDVLCLECWLKLPKCNFCNKPYCKQHTNWWCTSS 361
           GCNFCIP+CE+CG C+ S EVEEG C D+ CLECWL++PKC+FCNKPYCKQH N  CTSS
Sbjct: 73  GCNFCIPKCENCGGCIESGEVEEGDCEDIFCLECWLQIPKCSFCNKPYCKQHIN--CTSS 130

Query: 362 DSSFLCKVCDENSHGYTYNDVL 427
           DSS +CKVCDENSHGYTY DVL
Sbjct: 131 DSSLICKVCDENSHGYTYTDVL 152


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