BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012167
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron sp...   324   1e-86
ref|XP_003618343.1| Chloroplastic group IIA intron splicing faci...   292   5e-77
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              246   5e-63
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   246   5e-63
ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp...   237   3e-60

>ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 1028

 Score =  324 bits (831), Expect = 1e-86
 Identities = 192/315 (60%), Positives = 215/315 (68%), Gaps = 39/315 (12%)
 Frame = -3

Query: 830  GILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKL 651
            GILVAVERV KG+AIIVYRGKNYS P  LRPQTLLNK+QALKRSIEAQR ESLKL +L L
Sbjct: 631  GILVAVERVRKGFAIIVYRGKNYSVPVCLRPQTLLNKRQALKRSIEAQRRESLKLRILTL 690

Query: 650  DKNINELKRQMVKDE-ANSKQIAEELRSDMATDRHEACSDSINCNSPKEAS--------- 501
            DK INELK Q+V+DE ANSKQ+AE  R DMATD HEACS+ IN +SPKEAS         
Sbjct: 691  DKEINELKLQIVEDEEANSKQMAEASRLDMATDEHEACSNFINWHSPKEASGDNQQAIQE 750

Query: 500  -----------------------------VDNQQAIQEQPVELIDSGGARQSEPESSAGL 408
                                         +DNQQAIQE PVELID G   Q EPES   L
Sbjct: 751  EPVELIDSGGAHQGEPENSISWNSSIEASIDNQQAIQEHPVELIDGGATHQDEPESWPSL 810

Query: 407  IHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAPVIKGSSNELPSTSLYLS 228
            IHKE Q DEV+DSV DT   +SN K ME             APVI  S   LPS S++LS
Sbjct: 811  IHKETQSDEVSDSVTDTELHISNRKGMESSNSLSKNDREPLAPVIYMS---LPSRSVHLS 867

Query: 227  NRERLLLRKQALKIKKRSVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQE 48
             +ERLLLRKQALKI K+ VLAIGKSNI++GV + I  HF+KHP A+VNVKGRAKGTSVQE
Sbjct: 868  TKERLLLRKQALKI-KQPVLAIGKSNIVSGVVQTIKAHFEKHPLAVVNVKGRAKGTSVQE 926

Query: 47   VVSELEQATGAVLVS 3
            +V +LEQ TGA+LVS
Sbjct: 927  LVFKLEQETGALLVS 941


>ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355493358|gb|AES74561.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 1096

 Score =  292 bits (748), Expect = 5e-77
 Identities = 184/368 (50%), Positives = 218/368 (59%), Gaps = 92/368 (25%)
 Frame = -3

Query: 830  GILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKL 651
            GILVAVERVNKGYAIIVYRGKNYSRP +LRP+TLLNKKQALKRSIEAQR E+LKLHVLKL
Sbjct: 626  GILVAVERVNKGYAIIVYRGKNYSRPDSLRPRTLLNKKQALKRSIEAQRREALKLHVLKL 685

Query: 650  DKNINELKRQMVKDEANSKQIAEELRSDMATDR--HEACSDS------------------ 531
            DKNINELK QMVKDEA+S+QIA+ELRSD+AT+    EA  D+                  
Sbjct: 686  DKNINELKHQMVKDEASSEQIAKELRSDLATENSPEEASVDNQQPIQEQHIELIGSGGEC 745

Query: 530  ----------------INCNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSAGLIHK 399
                               NS +EASVDNQQ IQEQ +ELID+G   Q EPES  GL+H+
Sbjct: 746  QGEPESLTGLVHQERQATKNSLEEASVDNQQPIQEQHIELIDTGEECQGEPESLTGLVHQ 805

Query: 398  EKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXSAPVIKGSSNELPSTSLY----- 234
            E+QLDEV+D VVDTGH VS NKA E            SAPVI  +SNE PS+ ++     
Sbjct: 806  ERQLDEVDDFVVDTGHSVSTNKASEGSIISFKSDPEPSAPVINENSNEFPSSLVHPKRQL 865

Query: 233  --------------------------------------------LSNRERLLLRKQAL-- 192
                                                         S+R   L  ++ L  
Sbjct: 866  DEVSDSVVDTGHSVSTNDAMEASIISFKRDPEPSAPVINKSPIEFSSRSSSLSNRERLLL 925

Query: 191  -----KIKKRSVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQ 27
                 ++KK  ++ IGKSNI+ G+ +AI    ++HPF IVNVKGRAKGTSV E+VS LE+
Sbjct: 926  RKQALRMKKIPIVPIGKSNIVAGLEEAIKNLLRRHPFVIVNVKGRAKGTSVHELVSILEE 985

Query: 26   ATGAVLVS 3
            ATGAVLVS
Sbjct: 986  ATGAVLVS 993


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  246 bits (628), Expect = 5e-63
 Identities = 150/303 (49%), Positives = 198/303 (65%), Gaps = 27/303 (8%)
 Frame = -3

Query: 830  GILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKL 651
            GILVAVERV+KGYAII+YRGKNY RP++LRPQTLLNK++ALKRS+EAQR ESLKLHVL+L
Sbjct: 675  GILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRL 734

Query: 650  DKNINELKRQMV---KD-EANSKQIAEELRSDMATDRHEACSDSINCNSPKEASVDNQQA 483
             +NI+ELK Q+V   KD E NSKQ+ ++ R  +A +R+ A    I+ +   ++S D+ Q 
Sbjct: 735  TRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARERYGADVILIHSSDGMDSSRDSLQT 794

Query: 482  IQEQP----VELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXX 315
                       + DS    ++ PE S+  + KE + + + D + + G C + ++ +    
Sbjct: 795  SHNDKRIDFPSMCDSD-TDEANPEPSSESVLKEIETNVLTD-MNEEGECTTCSEDLVSQG 852

Query: 314  XXXXXXXXXSAPVIKGS-------------------SNELPSTSLYLSNRERLLLRKQAL 192
                         ++ S                   SNE+P  +  LSNRERLLLRKQAL
Sbjct: 853  ETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQAL 912

Query: 191  KIKKRSVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAV 12
            ++KKR V+A+G+SNI+TGVAK I  HFQKHP AIVNVKGRAKGTSVQEV+ +LEQATGAV
Sbjct: 913  RMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAV 972

Query: 11   LVS 3
            LVS
Sbjct: 973  LVS 975


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  246 bits (628), Expect = 5e-63
 Identities = 150/303 (49%), Positives = 198/303 (65%), Gaps = 27/303 (8%)
 Frame = -3

Query: 830  GILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKL 651
            GILVAVERV+KGYAII+YRGKNY RP++LRPQTLLNK++ALKRS+EAQR ESLKLHVL+L
Sbjct: 675  GILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRL 734

Query: 650  DKNINELKRQMV---KD-EANSKQIAEELRSDMATDRHEACSDSINCNSPKEASVDNQQA 483
             +NI+ELK Q+V   KD E NSKQ+ ++ R  +A +R+ A    I+ +   ++S D+ Q 
Sbjct: 735  TRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLARERYGADVILIHSSDGMDSSRDSLQT 794

Query: 482  IQEQP----VELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXX 315
                       + DS    ++ PE S+  + KE + + + D + + G C + ++ +    
Sbjct: 795  SHNDKRIDFPSMCDSD-TDEANPEPSSESVLKEIETNVLTD-MNEEGECTTCSEDLVSQG 852

Query: 314  XXXXXXXXXSAPVIKGS-------------------SNELPSTSLYLSNRERLLLRKQAL 192
                         ++ S                   SNE+P  +  LSNRERLLLRKQAL
Sbjct: 853  ETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQAL 912

Query: 191  KIKKRSVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAV 12
            ++KKR V+A+G+SNI+TGVAK I  HFQKHP AIVNVKGRAKGTSVQEV+ +LEQATGAV
Sbjct: 913  RMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAV 972

Query: 11   LVS 3
            LVS
Sbjct: 973  LVS 975


>ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 1027

 Score =  237 bits (604), Expect = 3e-60
 Identities = 137/216 (63%), Positives = 157/216 (72%), Gaps = 4/216 (1%)
 Frame = -3

Query: 638  NELKRQMVKDEANSKQIAEELRSDMATDRHEAC----SDSINCNSPKEASVDNQQAIQEQ 471
            N +     K+ +   Q A + +S    DR EA      +SI+ NSP+EASVDNQQAIQ Q
Sbjct: 760  NSINWNSPKEASVDNQQAIQGQSFELIDRSEAHHGEPENSIDWNSPEEASVDNQQAIQGQ 819

Query: 470  PVELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXX 291
            PVELID GGA Q EPES +GLI KE +LD  +DSVVDT HCVS +K ME           
Sbjct: 820  PVELIDGGGAHQDEPESWSGLIPKETKLDRDSDSVVDTQHCVSISKVMESSIVASESDPD 879

Query: 290  XSAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRSVLAIGKSNIMTGVAKAINTHF 111
             SA V   SSNELPS S+YLSNRERLLLRKQALK+KKR VL++GKSNI+TG+AKAI  HF
Sbjct: 880  LSALVRDMSSNELPSRSVYLSNRERLLLRKQALKMKKRPVLSVGKSNIVTGLAKAIKAHF 939

Query: 110  QKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 3
            QKHP AIVNVKGRAKGTS+QEVVS+LEQ TGAVLVS
Sbjct: 940  QKHPLAIVNVKGRAKGTSIQEVVSKLEQETGAVLVS 975



 Score =  182 bits (463), Expect = 6e-44
 Identities = 101/149 (67%), Positives = 113/149 (75%), Gaps = 11/149 (7%)
 Frame = -3

Query: 830  GILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKL 651
            GIL+AVERVNK YAIIVYRGKNYSRP++LRP+TLLNKKQALKRSIEAQRCESLKLHVLKL
Sbjct: 613  GILIAVERVNKSYAIIVYRGKNYSRPASLRPRTLLNKKQALKRSIEAQRCESLKLHVLKL 672

Query: 650  DKNINELKRQMVKD-EANSKQIAEELRS----------DMATDRHEACSDSINCNSPKEA 504
            D+NINELK QM KD EANSKQ + + +           D          +SIN N PKEA
Sbjct: 673  DRNINELKHQMAKDMEANSKQTSVDNQQAIQEQPVELIDSGGAHQAEPGNSINWNYPKEA 732

Query: 503  SVDNQQAIQEQPVELIDSGGARQSEPESS 417
            SVD QQ +QEQ VEL D GGA QSEP++S
Sbjct: 733  SVDYQQTMQEQSVELFDGGGAVQSEPQNS 761