BLASTX nr result

ID: Glycyrrhiza23_contig00012161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012161
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621628.1| Terminal ear1-like protein [Medicago truncat...   318   6e-85
gb|ABD32706.1| RNA-binding region RNP-1 (RNA recognition motif);...   305   9e-81
ref|XP_003626605.1| Polyadenylate-binding protein [Medicago trun...   305   9e-81
ref|XP_002304641.1| predicted protein [Populus trichocarpa] gi|2...   302   5e-80
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   283   4e-74

>ref|XP_003621628.1| Terminal ear1-like protein [Medicago truncatula]
           gi|355496643|gb|AES77846.1| Terminal ear1-like protein
           [Medicago truncatula]
          Length = 804

 Score =  318 bits (816), Expect = 6e-85
 Identities = 170/262 (64%), Positives = 189/262 (72%), Gaps = 1/262 (0%)
 Frame = -2

Query: 784 HIIRGSTGDDMDEXXXXXXXXXXXXXXXXXXXXGQKNSEILGGACNSQLGLCNTSIAGEN 605
           +II  S GDD+DE                     ++NSEI+ G  NS       SIAGEN
Sbjct: 133 YIICDSNGDDIDELDLFSSNGGFDLGDVENPSSIERNSEIISGVRNS-------SIAGEN 185

Query: 604 PYDEHPSRTLFVRNINNDVEDSELKALFEQFGDIHTFYTTCKHHGLVMISYYDIRAAQNA 425
            Y EHPSRTLFVRNI++DV+DS LKALFEQFGDIHTF  TCKH G  MISYYDIRAAQNA
Sbjct: 186 SYGEHPSRTLFVRNIDSDVKDSVLKALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNA 245

Query: 424 MRALRNRLFSCRKFDIHYSIPKDSPSKKDVNQSTLAVFLYDSSISNTELHRIFNVYGEIK 245
           MRAL NRLF  +KFDIHY IPKDSPS+  VNQ TL VFLYDSSISNTEL  I NVYG IK
Sbjct: 246 MRALNNRLFGRKKFDIHYPIPKDSPSRNGVNQGTLEVFLYDSSISNTELQHILNVYGGIK 305

Query: 244 EIREKPHGRHHKLIEFYDFRAAEAALHTLNRNDTTRKRFKVEPSQSRDSES-MIKQIHPE 68
           EI E P  + HKLIEFYDFRAA+AALH +NRNDTT KR KV+  QS +SES +I+ +HPE
Sbjct: 306 EIHENPRSQRHKLIEFYDFRAADAALHGINRNDTTMKRLKVDQMQSTNSESNIIQPMHPE 365

Query: 67  LEQKECSLCLHQKSPPLKSPTS 2
            +Q EC LCLHQKSP LK  TS
Sbjct: 366 FKQ-ECDLCLHQKSPLLKPTTS 386


>gb|ABD32706.1| RNA-binding region RNP-1 (RNA recognition motif); RNA recognition
           motif 2 [Medicago truncatula]
          Length = 722

 Score =  305 bits (780), Expect = 9e-81
 Identities = 160/227 (70%), Positives = 175/227 (77%)
 Frame = -2

Query: 682 QKNSEILGGACNSQLGLCNTSIAGENPYDEHPSRTLFVRNINNDVEDSELKALFEQFGDI 503
           +KN EIL  A N       TS A ENP  EHPSRTLFVRNI+++VEDSELKALFEQFGDI
Sbjct: 113 EKNCEILDKARN-------TSFAVENPSGEHPSRTLFVRNIDSEVEDSELKALFEQFGDI 165

Query: 502 HTFYTTCKHHGLVMISYYDIRAAQNAMRALRNRLFSCRKFDIHYSIPKDSPSKKDVNQST 323
            TF   CKH G  MISYYD+RAAQ AMRAL+N+LFSCRKFDIHYSIPKDSPS+K VNQ T
Sbjct: 166 DTFDRDCKHQGNAMISYYDMRAAQKAMRALQNQLFSCRKFDIHYSIPKDSPSRKGVNQGT 225

Query: 322 LAVFLYDSSISNTELHRIFNVYGEIKEIREKPHGRHHKLIEFYDFRAAEAALHTLNRNDT 143
           LAVFLYDSSISNTE+H IFNV+G+IKEI E PH  HHKLIEFY+F AAE ALH LNRNDT
Sbjct: 226 LAVFLYDSSISNTEIHNIFNVHGDIKEIHENPHSWHHKLIEFYNFEAAEKALHDLNRNDT 285

Query: 142 TRKRFKVEPSQSRDSESMIKQIHPELEQKECSLCLHQKSPPLKSPTS 2
           + KR KVEPSQS DSESMI+ I             HQKS P+K PTS
Sbjct: 286 SMKRLKVEPSQSTDSESMIQLI-------------HQKSSPIKPPTS 319


>ref|XP_003626605.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355501620|gb|AES82823.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 751

 Score =  305 bits (780), Expect = 9e-81
 Identities = 160/227 (70%), Positives = 175/227 (77%)
 Frame = -2

Query: 682 QKNSEILGGACNSQLGLCNTSIAGENPYDEHPSRTLFVRNINNDVEDSELKALFEQFGDI 503
           +KN EIL  A N       TS A ENP  EHPSRTLFVRNI+++VEDSELKALFEQFGDI
Sbjct: 105 EKNCEILDKARN-------TSFAVENPSGEHPSRTLFVRNIDSEVEDSELKALFEQFGDI 157

Query: 502 HTFYTTCKHHGLVMISYYDIRAAQNAMRALRNRLFSCRKFDIHYSIPKDSPSKKDVNQST 323
            TF   CKH G  MISYYD+RAAQ AMRAL+N+LFSCRKFDIHYSIPKDSPS+K VNQ T
Sbjct: 158 DTFDRDCKHQGNAMISYYDMRAAQKAMRALQNQLFSCRKFDIHYSIPKDSPSRKGVNQGT 217

Query: 322 LAVFLYDSSISNTELHRIFNVYGEIKEIREKPHGRHHKLIEFYDFRAAEAALHTLNRNDT 143
           LAVFLYDSSISNTE+H IFNV+G+IKEI E PH  HHKLIEFY+F AAE ALH LNRNDT
Sbjct: 218 LAVFLYDSSISNTEIHNIFNVHGDIKEIHENPHSWHHKLIEFYNFEAAEKALHDLNRNDT 277

Query: 142 TRKRFKVEPSQSRDSESMIKQIHPELEQKECSLCLHQKSPPLKSPTS 2
           + KR KVEPSQS DSESMI+ I             HQKS P+K PTS
Sbjct: 278 SMKRLKVEPSQSTDSESMIQLI-------------HQKSSPIKPPTS 311


>ref|XP_002304641.1| predicted protein [Populus trichocarpa] gi|222842073|gb|EEE79620.1|
           predicted protein [Populus trichocarpa]
          Length = 976

 Score =  302 bits (774), Expect = 5e-80
 Identities = 149/226 (65%), Positives = 172/226 (76%)
 Frame = -2

Query: 682 QKNSEILGGACNSQLGLCNTSIAGENPYDEHPSRTLFVRNINNDVEDSELKALFEQFGDI 503
           Q +SE  GGA N QLG CN S+AGE+PY EHPSRTLFVRNIN++VE+SEL+A+FEQ+GDI
Sbjct: 245 QIDSEFHGGASNGQLGACNLSVAGEHPYGEHPSRTLFVRNINSNVEESELRAIFEQYGDI 304

Query: 502 HTFYTTCKHHGLVMISYYDIRAAQNAMRALRNRLFSCRKFDIHYSIPKDSPSKKDVNQST 323
            T YT CKH G VMISYYDIRAA+NAM+AL+NR   CRK DIHYSIPKD+PS+KD NQ T
Sbjct: 305 RTLYTACKHRGFVMISYYDIRAAKNAMKALQNRPLRCRKLDIHYSIPKDNPSEKDFNQGT 364

Query: 322 LAVFLYDSSISNTELHRIFNVYGEIKEIREKPHGRHHKLIEFYDFRAAEAALHTLNRNDT 143
           LAVF  DSS+SN +L RIF VYGEIKEIRE PH  HHK +EFYD RAAEAALH LN++D 
Sbjct: 365 LAVFNLDSSVSNDDLRRIFGVYGEIKEIRETPHRNHHKFVEFYDVRAAEAALHALNKSDI 424

Query: 142 TRKRFKVEPSQSRDSESMIKQIHPELEQKECSLCLHQKSPPLKSPT 5
             KR K+E S       ++ QI PELEQ E    + Q SPP  S T
Sbjct: 425 AGKRIKLEASCPGGLRRLLHQIPPELEQDEFGPFVQQSSPPNNSTT 470


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  283 bits (723), Expect = 4e-74
 Identities = 145/260 (55%), Positives = 176/260 (67%)
 Frame = -2

Query: 784 HIIRGSTGDDMDEXXXXXXXXXXXXXXXXXXXXGQKNSEILGGACNSQLGLCNTSIAGEN 605
           ++++ S GDD+++                     Q+NSE  GG  N QLG  N S  GE+
Sbjct: 184 YVVQPSNGDDLEDIDLFSSVGGMDLGDDGSSAG-QRNSEYPGGMSNGQLGGSNGSAVGEH 242

Query: 604 PYDEHPSRTLFVRNINNDVEDSELKALFEQFGDIHTFYTTCKHHGLVMISYYDIRAAQNA 425
           PY EHPSRTLFVRNIN++VEDSEL+ LFEQ+GDI   YT CKH G VMISYYDIRAA+NA
Sbjct: 243 PYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIRALYTACKHRGFVMISYYDIRAARNA 302

Query: 424 MRALRNRLFSCRKFDIHYSIPKDSPSKKDVNQSTLAVFLYDSSISNTELHRIFNVYGEIK 245
           MRAL+N+    RK DIHYSIPKD+P +KDVNQ TL VF  D S++N EL +IF VYGEIK
Sbjct: 303 MRALQNKPLRRRKLDIHYSIPKDNPPEKDVNQGTLVVFNLDPSVTNDELLQIFGVYGEIK 362

Query: 244 EIREKPHGRHHKLIEFYDFRAAEAALHTLNRNDTTRKRFKVEPSQSRDSESMIKQIHPEL 65
           EIRE PH  HHK +EFYD RAAEAAL  LNR+D   KR K+EPS+   +  +++Q   EL
Sbjct: 363 EIRETPHRSHHKFVEFYDIRAAEAALRALNRSDIAGKRIKLEPSRPGGARRLMQQFPSEL 422

Query: 64  EQKECSLCLHQKSPPLKSPT 5
           E+ E  L L Q + P  S T
Sbjct: 423 EEDESGLYLQQNNTPNNSTT 442


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