BLASTX nr result

ID: Glycyrrhiza23_contig00012110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012110
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]         378   e-102
ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata] g...   372   e-100
ref|XP_002523500.1| abc transporter, putative [Ricinus communis]...   372   e-100
ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis ...   371   e-100
ref|XP_002886405.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata] g...   370   e-100

>gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]
          Length = 251

 Score =  378 bits (970), Expect = e-102
 Identities = 185/230 (80%), Positives = 206/230 (89%)
 Frame = -1

Query: 919 SMSIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALELTGANGSGKTTLLRMLAGF 740
           SM +RKPP PR+LLN+VSCMRNAQQ+LRHVNVS+HDGGAL LTG+NGSGKTT LRMLAGF
Sbjct: 22  SMPVRKPPLPRILLNDVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGF 81

Query: 739 SRPSAGEILWNGHNTQDSGIYQQYKLQINWLSLKDAITEKFTVLENVQWFELLEGKRGKS 560
           SRPSAG+ILWNGH+   SGI+ QYKLQ+NWLSLKDA+ EKFTVL+NVQWFE+LEGK GKS
Sbjct: 82  SRPSAGQILWNGHDISQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVLEGKHGKS 141

Query: 559 LPALELMGLGRLAREKPRMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDEGVKLLEY 380
           LPALELMGLGRLA++K RMLSMG           AIDRPIWLLDEPSVALD+EGV+LLEY
Sbjct: 142 LPALELMGLGRLAKDKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDNEGVRLLEY 201

Query: 379 IIAEHRKQGGIVIVATHLPIKIEDSMVLRLPPRFPRRMTFVDMLDRADIS 230
           IIAEHRK+GGIVIVATHLPI+IED+M LRLPPRFPRRMT VDMLDRADI+
Sbjct: 202 IIAEHRKKGGIVIVATHLPIQIEDAMNLRLPPRFPRRMTLVDMLDRADIA 251


>ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297332256|gb|EFH62674.1| ATNAP10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 229

 Score =  372 bits (954), Expect = e-100
 Identities = 183/229 (79%), Positives = 202/229 (88%)
 Frame = -1

Query: 916 MSIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALELTGANGSGKTTLLRMLAGFS 737
           MSIR+P  PRLLL NVSCMRNAQQ+LRHVNVSLHDGGAL LTG NGSGK+T LRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 736 RPSAGEILWNGHNTQDSGIYQQYKLQINWLSLKDAITEKFTVLENVQWFELLEGKRGKSL 557
           +PSAGEILWNGH+   SGI+QQYKLQ+NW+SLKDAI E+FTVL+NVQWFELLE K GK+ 
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 556 PALELMGLGRLAREKPRMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDEGVKLLEYI 377
           PALELMGLGRL +EK RMLSMG           AIDRPIWLLDEPSVALDDEGV+LLEYI
Sbjct: 121 PALELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 376 IAEHRKQGGIVIVATHLPIKIEDSMVLRLPPRFPRRMTFVDMLDRADIS 230
           IAEHRK+GGIVIVATHLPI+IED+M+LRLPPRFPR+MT +DMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHLPIEIEDAMILRLPPRFPRKMTLIDMLDRADIS 229


>ref|XP_002523500.1| abc transporter, putative [Ricinus communis]
           gi|223537207|gb|EEF38839.1| abc transporter, putative
           [Ricinus communis]
          Length = 229

 Score =  372 bits (954), Expect = e-100
 Identities = 181/229 (79%), Positives = 204/229 (89%)
 Frame = -1

Query: 916 MSIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALELTGANGSGKTTLLRMLAGFS 737
           MS+RKPP P +LL+NVSCMRNAQQ+LRHVNVS+HDGGAL LTG+NGSGKTT LRMLAGFS
Sbjct: 1   MSLRKPPLPCMLLDNVSCMRNAQQILRHVNVSIHDGGALVLTGSNGSGKTTFLRMLAGFS 60

Query: 736 RPSAGEILWNGHNTQDSGIYQQYKLQINWLSLKDAITEKFTVLENVQWFELLEGKRGKSL 557
           +PSAG+ILWNGH+  +SG++ QYKLQ+NWLSLKDAI EKFTVL+NVQWFE+LEGK+G S+
Sbjct: 61  KPSAGQILWNGHDVTESGVFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEILEGKQGNSM 120

Query: 556 PALELMGLGRLAREKPRMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDEGVKLLEYI 377
            ALELMGLGRLA++K RMLSMG           AIDRPIWLLDEPSVALDDEGV+LLEYI
Sbjct: 121 RALELMGLGRLAKDKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 376 IAEHRKQGGIVIVATHLPIKIEDSMVLRLPPRFPRRMTFVDMLDRADIS 230
           IAEHRK+GGIV VATHLPI+IED+M LRLPPRFPRRMT VDMLDRADIS
Sbjct: 181 IAEHRKKGGIVFVATHLPIEIEDAMYLRLPPRFPRRMTLVDMLDRADIS 229


>ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis thaliana]
           gi|47605542|sp|Q9C8T1.1|AB1I_ARATH RecName: Full=ABC
           transporter I family member 1; Short=ABC transporter
           ABCI.1; Short=AtABCI1; AltName: Full=Cytochrome c
           biogenesis ATP-binding export protein ccmA-like;
           AltName: Full=MRP-related protein 3; AltName:
           Full=Putative non-intrinsic ABC protein 10
           gi|12324363|gb|AAG52155.1|AC022355_16 hypothetical
           protein; 38474-39163 [Arabidopsis thaliana]
           gi|332195959|gb|AEE34080.1| ABC transporter I family
           member 1 [Arabidopsis thaliana]
          Length = 229

 Score =  371 bits (952), Expect = e-100
 Identities = 183/229 (79%), Positives = 201/229 (87%)
 Frame = -1

Query: 916 MSIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALELTGANGSGKTTLLRMLAGFS 737
           MSIR+P  PRLLL NVSCMRNAQQ+LRHVNVSLHDGGAL LTG NGSGK+T LRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 736 RPSAGEILWNGHNTQDSGIYQQYKLQINWLSLKDAITEKFTVLENVQWFELLEGKRGKSL 557
           +PSAGEILWNGH+   SGI+QQYKLQ+NW+SLKDAI E+FTVL+NVQWFELLE K GK+ 
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 556 PALELMGLGRLAREKPRMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDEGVKLLEYI 377
           PALELMGLGRL +EK RMLSMG           AIDRPIWLLDEPSVALDDEGV+LLEYI
Sbjct: 121 PALELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 376 IAEHRKQGGIVIVATHLPIKIEDSMVLRLPPRFPRRMTFVDMLDRADIS 230
           IAEHRK+GGIVIVATHLPI IED+M+LRLPPRFPR+MT +DMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHLPIDIEDAMILRLPPRFPRKMTLIDMLDRADIS 229


>ref|XP_002886405.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297837061|ref|XP_002886412.1| ATNAP10 [Arabidopsis
           lyrata subsp. lyrata] gi|297332246|gb|EFH62664.1|
           ATNAP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297332253|gb|EFH62671.1| ATNAP10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 229

 Score =  370 bits (950), Expect = e-100
 Identities = 182/229 (79%), Positives = 201/229 (87%)
 Frame = -1

Query: 916 MSIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALELTGANGSGKTTLLRMLAGFS 737
           MSIR+P  PRLLL NVSCMRNAQQ+LRHVNVSLHDGGAL LTG NGSGK+T LRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 736 RPSAGEILWNGHNTQDSGIYQQYKLQINWLSLKDAITEKFTVLENVQWFELLEGKRGKSL 557
           +PSAGEILWNGH+   SGI+QQYKLQ+NW+SLKDAI E+FTVL+NVQWFELLE K GK+ 
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 556 PALELMGLGRLAREKPRMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDEGVKLLEYI 377
           P LELMGLGRL +EK RMLSMG           AIDRPIWLLDEPSVALDDEGV+LLEYI
Sbjct: 121 PTLELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 376 IAEHRKQGGIVIVATHLPIKIEDSMVLRLPPRFPRRMTFVDMLDRADIS 230
           IAEHRK+GGIVIVATHLPI+IED+M+LRLPPRFPR+MT +DMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHLPIEIEDAMILRLPPRFPRKMTLIDMLDRADIS 229


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