BLASTX nr result

ID: Glycyrrhiza23_contig00012078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012078
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556332.1| PREDICTED: structural maintenance of chromos...   580   e-163
ref|XP_003599445.1| Structural maintenance of chromosomes protei...   550   e-154
ref|XP_003613413.1| Structural maintenance of chromosomes protei...   510   e-142
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...   497   e-138
ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   496   e-138

>ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like
            [Glycine max]
          Length = 1059

 Score =  580 bits (1496), Expect = e-163
 Identities = 292/330 (88%), Positives = 308/330 (93%), Gaps = 7/330 (2%)
 Frame = +3

Query: 3    RFRNAIKIKDLLVEAVGYRRSFVEQRMAFIEFDAKIGEMEANLKQHENFAVQASLHFENC 182
            RF NA++IKDLLVEAV YRR F+EQRMAFIEFDAKI EMEANLKQHE FA+QASLHF+NC
Sbjct: 718  RFHNAMEIKDLLVEAVSYRRIFIEQRMAFIEFDAKIVEMEANLKQHEKFALQASLHFDNC 777

Query: 183  KKEAENCRQRLTELLNNAKSIARLTPELEKEFLEMPTTIEDLEAAIQDTISQANSILFVN 362
            KKE+ENCRQ LT+ L  AKSIARLTPEL+KEFLEMPTTIEDLEAAIQDT S+ANSILFVN
Sbjct: 778  KKESENCRQDLTDSLKYAKSIARLTPELKKEFLEMPTTIEDLEAAIQDTTSEANSILFVN 837

Query: 363  HNILEQYEDRQRQIEELAAKLEADKKESRRCRAELDNIKGKWLPTLRNLVAQINETFSCN 542
            HNILEQYEDRQ+QIE+LAAKLEADKKES RC AEL+NIKGKWLPTLRNLVA+INETFS N
Sbjct: 838  HNILEQYEDRQQQIEDLAAKLEADKKESTRCLAELNNIKGKWLPTLRNLVAKINETFSFN 897

Query: 543  FQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGERSVSTIVYLVSL 722
            FQEMAVAGEVSLDE DMDFDQFGILIKVKFRENG+L+NLSAHHQSGGERSVSTIVYLVSL
Sbjct: 898  FQEMAVAGEVSLDERDMDFDQFGILIKVKFRENGQLQNLSAHHQSGGERSVSTIVYLVSL 957

Query: 723  QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACS 902
            QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACS
Sbjct: 958  QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACS 1017

Query: 903  ILNVMNGPWIEQPSK-------VWTTGERW 971
            ILNVMNGPWIEQPSK       VWT G+RW
Sbjct: 1018 ILNVMNGPWIEQPSKGYSLCESVWTAGDRW 1047


>ref|XP_003599445.1| Structural maintenance of chromosomes protein [Medicago truncatula]
            gi|355488493|gb|AES69696.1| Structural maintenance of
            chromosomes protein [Medicago truncatula]
          Length = 751

 Score =  550 bits (1418), Expect = e-154
 Identities = 290/364 (79%), Positives = 303/364 (83%), Gaps = 41/364 (11%)
 Frame = +3

Query: 3    RFRNAIKIKDLLVEAVGYRRSFVEQRMAFIEFDAKIGEMEANLKQHENFAVQASLHFENC 182
            R  NAIKIKDLLVEA GYRRSF EQRMAFIEFDAKIGE EA+LKQHEN A+QAS HF NC
Sbjct: 376  RLHNAIKIKDLLVEAAGYRRSFAEQRMAFIEFDAKIGEAEASLKQHENIALQASSHFNNC 435

Query: 183  ------------------------KKEAENCRQRLTELLNNAKSIARLTPELEKEFLEMP 290
                                    KKEAE CRQ+LT+LLN AKSIARLTP+LEKEFLEMP
Sbjct: 436  EKLFKCLFVDFVRCNYVPNSCFAAKKEAEECRQKLTDLLNYAKSIARLTPDLEKEFLEMP 495

Query: 291  TTIEDLEAAIQDTISQANSILFVNHNILEQYEDRQRQIEELAAKLEADKKESRRCRAELD 470
            TTIE+LEAAIQDT SQANSILFVN+NILEQYE RQRQIE+LA KL+ADKKES RC AELD
Sbjct: 496  TTIEELEAAIQDTTSQANSILFVNNNILEQYEARQRQIEDLAKKLDADKKESTRCLAELD 555

Query: 471  NIKGKWLPTLRNLVAQINETFSCNFQEMAVAGEVSLD----EHDMDFDQFGILIKVKFRE 638
            NIKGKWLPTLRNLVAQINETFS NFQ+MAVAGEVSL     EHDMDFDQFGI IKVKFRE
Sbjct: 556  NIKGKWLPTLRNLVAQINETFSQNFQQMAVAGEVSLGLADYEHDMDFDQFGIHIKVKFRE 615

Query: 639  NGKLENLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQG-------------MD 779
            +G+LE LSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQG             MD
Sbjct: 616  SGQLEVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGWLVFRINSFWFNRMD 675

Query: 780  PINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTT 959
            PINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWT 
Sbjct: 676  PINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTA 735

Query: 960  GERW 971
            G+RW
Sbjct: 736  GDRW 739


>ref|XP_003613413.1| Structural maintenance of chromosomes protein [Medicago truncatula]
            gi|355514748|gb|AES96371.1| Structural maintenance of
            chromosomes protein [Medicago truncatula]
          Length = 750

 Score =  510 bits (1314), Expect = e-142
 Identities = 271/377 (71%), Positives = 297/377 (78%), Gaps = 54/377 (14%)
 Frame = +3

Query: 3    RFRNAIKIKDLLVEAVGYRRSFVEQRMAFIEFDAKIGEMEANLKQHENFAVQASLHFENC 182
            RF NAIK+KDLLVEA  Y RS+V Q MAFIEF AKIG+MEANLKQHENFA QAS HF   
Sbjct: 362  RFHNAIKVKDLLVEAARYGRSYVVQGMAFIEFAAKIGDMEANLKQHENFARQASEHFNKS 421

Query: 183  KKEAENCRQRLTELLNNAKSIARLTPELEKEFLEMPTTIEDLEAAIQDTISQANSILFVN 362
            KKEAE C+Q+LT+LLNNAKSIA LTP+L+KEFLEMPTTIE+LEAAIQDT SQANS+LF+N
Sbjct: 422  KKEAEECKQKLTDLLNNAKSIAPLTPDLQKEFLEMPTTIEELEAAIQDTTSQANSMLFMN 481

Query: 363  HNILEQYEDRQR-----------------------QIEELAAKLEADKKESRRCRAELDN 473
             +IL+QYEDRQR                       QIE+LA KL+ DKKE+ +CR+EL+ 
Sbjct: 482  PHILQQYEDRQRQVLFILVFFVGYFHVPSIFTVTIQIEDLAKKLDMDKKEATKCRSELET 541

Query: 474  IK------------------GKWLPTLRNLVAQINETFSCNFQEMAVAGEVSLDEHDMDF 599
            IK                   KWLPTLRNLVAQINETFS NFQ+MAVAGEVSLDEHDM++
Sbjct: 542  IKKGRRGPKWIGSTDTVDELEKWLPTLRNLVAQINETFSRNFQQMAVAGEVSLDEHDMNY 601

Query: 600  DQFGILIKVKFRENGKLENLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQ--- 770
            DQFGILIKVKFRENG+L+ LSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQ   
Sbjct: 602  DQFGILIKVKFRENGQLKVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGWL 661

Query: 771  ----------GMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMN 920
                      GMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMN
Sbjct: 662  FVEVNSFWINGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMN 721

Query: 921  GPWIEQPSKVWTTGERW 971
            GPWIEQPSK   +G+RW
Sbjct: 722  GPWIEQPSKACASGDRW 738


>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
            vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
            product [Vitis vinifera]
          Length = 1051

 Score =  497 bits (1280), Expect = e-138
 Identities = 245/323 (75%), Positives = 284/323 (87%)
 Frame = +3

Query: 3    RFRNAIKIKDLLVEAVGYRRSFVEQRMAFIEFDAKIGEMEANLKQHENFAVQASLHFENC 182
            R++  I+IK+LL+E+V Y+R+F E+ M  IEFDAKI E+E  +KQ E FA+QASLHFENC
Sbjct: 717  RYQCVIEIKNLLIESVSYKRTFAEKHMTSIEFDAKIRELEVGIKQQERFAMQASLHFENC 776

Query: 183  KKEAENCRQRLTELLNNAKSIARLTPELEKEFLEMPTTIEDLEAAIQDTISQANSILFVN 362
            KKE E+ RQ+L     +A+SIA +TP LEK FLEMP TIEDLEAAIQDTISQANSILF+N
Sbjct: 777  KKEVEDHRQQLAAAKRHAESIAVITPVLEKAFLEMPATIEDLEAAIQDTISQANSILFLN 836

Query: 363  HNILEQYEDRQRQIEELAAKLEADKKESRRCRAELDNIKGKWLPTLRNLVAQINETFSCN 542
            HNILE+YE+ Q++IE ++ KLEAD+KE R   AE+D +K  WL TLRNLVAQINETFS N
Sbjct: 837  HNILEEYEECQQKIEAISTKLEADEKELRMYLAEIDALKENWLTTLRNLVAQINETFSRN 896

Query: 543  FQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGERSVSTIVYLVSL 722
            FQ+MAVAGEVSLDEHD+DFDQFGILIKVKFR+ G+L+ LSAHHQSGGERSV+TI+YLVSL
Sbjct: 897  FQDMAVAGEVSLDEHDIDFDQFGILIKVKFRQAGELQVLSAHHQSGGERSVATILYLVSL 956

Query: 723  QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACS 902
            QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS+PNTPQCFLLTPKLLPDL+YSEACS
Sbjct: 957  QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACS 1016

Query: 903  ILNVMNGPWIEQPSKVWTTGERW 971
            ILN+MNGPWIEQPSKVW+ G+ W
Sbjct: 1017 ILNIMNGPWIEQPSKVWSNGDCW 1039


>ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes
            protein 5-like [Cucumis sativus]
          Length = 1053

 Score =  496 bits (1277), Expect = e-138
 Identities = 244/323 (75%), Positives = 281/323 (86%)
 Frame = +3

Query: 3    RFRNAIKIKDLLVEAVGYRRSFVEQRMAFIEFDAKIGEMEANLKQHENFAVQASLHFENC 182
            RF  AI+IK+LL+EAV YR+S  +  M+ IE +AKI E+E NLKQHE  A+QAS+ FE C
Sbjct: 719  RFHCAIEIKNLLLEAVSYRQSLTKNHMSSIEIEAKIRELEVNLKQHEKVALQASVQFEYC 778

Query: 183  KKEAENCRQRLTELLNNAKSIARLTPELEKEFLEMPTTIEDLEAAIQDTISQANSILFVN 362
            KKE E+  Q+L+     A+SIA +TPELEKEFLEMPTTIE+LEAAIQD ISQANSILF+N
Sbjct: 779  KKEVEDYLQQLSAAKKYAESIAAITPELEKEFLEMPTTIEELEAAIQDNISQANSILFLN 838

Query: 363  HNILEQYEDRQRQIEELAAKLEADKKESRRCRAELDNIKGKWLPTLRNLVAQINETFSCN 542
            HN+LE+YE RQRQI  +A KLEADK E R+C AE+D +KG WLPTLR LV+QINETFS N
Sbjct: 839  HNVLEEYEHRQRQINIIARKLEADKHELRKCMAEVDELKGNWLPTLRKLVSQINETFSRN 898

Query: 543  FQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGKLENLSAHHQSGGERSVSTIVYLVSL 722
            FQEMAVAGEV LDEHDMDFDQFGILIKVKFR++G+L+ LSAHHQSGGERSVSTI+YLVSL
Sbjct: 899  FQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSL 958

Query: 723  QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACS 902
            QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS+ NTPQCFLLTPKLLP+L+YSEAC+
Sbjct: 959  QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACT 1018

Query: 903  ILNVMNGPWIEQPSKVWTTGERW 971
            ILN+MNGPWIEQPS+ W+ G+ W
Sbjct: 1019 ILNIMNGPWIEQPSRAWSNGDSW 1041


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