BLASTX nr result

ID: Glycyrrhiza23_contig00012075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012075
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820...   307   2e-81
gb|AFK47791.1| unknown [Lotus japonicus]                              293   3e-77
ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 k...   291   2e-76
gb|AFK38763.1| unknown [Medicago truncatula]                          237   3e-61
gb|AFK48583.1| unknown [Lotus japonicus]                              220   4e-55

>ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820296 [Glycine max]
          Length = 275

 Score =  307 bits (787), Expect = 2e-81
 Identities = 168/265 (63%), Positives = 194/265 (73%), Gaps = 15/265 (5%)
 Frame = -2

Query: 959 STMAETRLIV----PSVKNTRRSQFPSSLGIFS---SNKSFFYDKLPSQPLRLSVLKLDA 801
           +T  E +LIV    P+ K+ RRS   SSL I     + KSFFYD+LPSQPLRL+VLKLD 
Sbjct: 2   ATEHEKQLIVAKPNPNTKSPRRSSTSSSLAIIDGIFARKSFFYDRLPSQPLRLTVLKLDG 61

Query: 800 SSFDIQVSKTATVAELKDAVEAVFSHMPQKGPAKISWPHVWGQFCLCYDGQKLIAEEDYL 621
           S F IQVSKTATVAELKDAVEAVFSH+P KGPAKISW HVWGQFCLCYDGQKL+ E+D L
Sbjct: 62  SCFHIQVSKTATVAELKDAVEAVFSHVPHKGPAKISWAHVWGQFCLCYDGQKLVTEKDNL 121

Query: 620 KNYGIKDGDQLRFVRHVSNNCGXXXXXXXXXXXVHLKQHRRSSQVNNCEPKENCXXXXXX 441
           +NYGIKDGDQLRF+RHV+NNC            V+LKQHRRSSQV+  +PK NC      
Sbjct: 122 RNYGIKDGDQLRFIRHVTNNC-CVQRKRLKKRVVYLKQHRRSSQVDGYQPKGNC---DDD 177

Query: 440 XXXXXXEVTQNGKIKPHIEEEG--------VGKSKLTGFIGVVFSYTPLAIVRKTTTKSR 285
                 E T NGKIK HIEEE         VGK+KL GF+G +FSYTPLA+VR+T TKS+
Sbjct: 178 EIGSDDEATDNGKIKHHIEEEEEEEREEECVGKNKLAGFLGELFSYTPLAVVRRTRTKSK 237

Query: 284 ILIPSTIPRCLLGSFRKIRRIVCFG 210
           I  P+T+P+C+LGSFRKIR IVCFG
Sbjct: 238 IW-PTTMPKCILGSFRKIRSIVCFG 261


>gb|AFK47791.1| unknown [Lotus japonicus]
          Length = 269

 Score =  293 bits (751), Expect = 3e-77
 Identities = 162/259 (62%), Positives = 185/259 (71%), Gaps = 11/259 (4%)
 Frame = -2

Query: 953 MAETRLIVPS----VKNTRRSQFP--SSLGIFSSNKSFFYDKLPSQPLRLSVLKLDASSF 792
           MAET LI+ +    +K+ +  QF   S +    + KSF Y KLPSQP RLSVLKLD SSF
Sbjct: 1   MAETSLILTTTTEKIKSRKLLQFSTISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSF 60

Query: 791 DIQVSKTATVAELKDAVEAVFSHMPQKGPAKISWPHVWGQFCLCYDGQKLIAEEDYLKNY 612
           DIQVSKTA++AELKDAVEAVFSHMP+KGPAKISWPHVWGQFCLCYDGQKL+ EEDYL+NY
Sbjct: 61  DIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNY 120

Query: 611 GIKDGDQLRFVRHVSNNCGXXXXXXXXXXXVHLKQHR-RSSQVNNCEPKENCXXXXXXXX 435
           GIKDGD+L F+RHVSNNC               K+ R RSSQVN+CEP+ENC        
Sbjct: 121 GIKDGDELHFMRHVSNNCTVRRKRPKKRVLRLKKRRRSRSSQVNSCEPEENCNDGEVSSD 180

Query: 434 XXXXEVTQNGKIKPHI----EEEGVGKSKLTGFIGVVFSYTPLAIVRKTTTKSRILIPST 267
                  +N K K  I    EEE VGK+KLTG +G +FS TPLA+VRK  +KSR    ST
Sbjct: 181 GEED--QENVKTKHCIGEEEEEEHVGKNKLTGIVGELFSCTPLAVVRKAKSKSRSW-SST 237

Query: 266 IPRCLLGSFRKIRRIVCFG 210
           IPRCLLGSFRKIRRIVCFG
Sbjct: 238 IPRCLLGSFRKIRRIVCFG 256


>ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula] gi|355477824|gb|AES59027.1| U11/U12 small
           nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula]
          Length = 266

 Score =  291 bits (745), Expect = 2e-76
 Identities = 155/258 (60%), Positives = 182/258 (70%), Gaps = 10/258 (3%)
 Frame = -2

Query: 953 MAETRL--IVPSVKN-----TRRSQFPSSLGIFSSNKSFFYDKLPSQPLRLSVLKLDASS 795
           MAET L  I+P++K      +  S   S L IFS+ KS  YDKLPS+PLRLSVLKLD +S
Sbjct: 1   MAETSLSLILPNMKKKTTLFSSSSSSSSPLPIFST-KSLLYDKLPSEPLRLSVLKLDGTS 59

Query: 794 FDIQVSKTATVAELKDAVEAVFSHMPQKGPAKISWPHVWGQFCLCYDGQKLIAEEDYLKN 615
           FD+ VSK AT+AELKDAVE VFS+MPQ GPAKISWPHVWGQFCLCYDGQKL+ E+DYLKN
Sbjct: 60  FDVHVSKNATIAELKDAVEGVFSYMPQHGPAKISWPHVWGQFCLCYDGQKLVTEKDYLKN 119

Query: 614 YGIKDGDQLRFVRHVSNNCGXXXXXXXXXXXVHLKQHRRSSQVNNCEPKENC---XXXXX 444
           YG+KD DQL F+RH SNNCG            HLKQHRR SQ N C+ KENC        
Sbjct: 120 YGVKDSDQLHFIRHASNNCG-ARRKRSKKRVFHLKQHRRLSQANYCKQKENCDADEDDDD 178

Query: 443 XXXXXXXEVTQNGKIKPHIEEEGVGKSKLTGFIGVVFSYTPLAIVRKTTTKSRILIPSTI 264
                  E  +N + K HIEE  V K+K+TGF+G + SYTPLA+VRKT  +++I  PSTI
Sbjct: 179 GDISSDEEALENAETKHHIEEVHVRKNKITGFVGELLSYTPLAVVRKTRAQNQI-FPSTI 237

Query: 263 PRCLLGSFRKIRRIVCFG 210
            RCL+G  RKI+RIVCFG
Sbjct: 238 SRCLIGGLRKIKRIVCFG 255


>gb|AFK38763.1| unknown [Medicago truncatula]
          Length = 226

 Score =  237 bits (604), Expect(2) = 3e-61
 Identities = 127/214 (59%), Positives = 147/214 (68%), Gaps = 10/214 (4%)
 Frame = -2

Query: 953 MAETRL--IVPSVKN-----TRRSQFPSSLGIFSSNKSFFYDKLPSQPLRLSVLKLDASS 795
           MAET L  I+P++K      +  S   S L IFS+ KS  YDKLPS+PLRLSVLKLD +S
Sbjct: 1   MAETSLSLILPNMKKKTTLFSSSSSSSSPLPIFST-KSLLYDKLPSEPLRLSVLKLDGTS 59

Query: 794 FDIQVSKTATVAELKDAVEAVFSHMPQKGPAKISWPHVWGQFCLCYDGQKLIAEEDYLKN 615
           FD+ VSK AT+AELKDAVE VFS+MPQ GPAKISWPHVWGQFCLCYDGQKL+ E+DYLKN
Sbjct: 60  FDVHVSKNATIAELKDAVEGVFSYMPQHGPAKISWPHVWGQFCLCYDGQKLVTEKDYLKN 119

Query: 614 YGIKDGDQLRFVRHVSNNCGXXXXXXXXXXXVHLKQHRRSSQVNNCEPKENC---XXXXX 444
           YG+KD DQL F+RH SNNCG            HLKQHRR SQ N C+ KENC        
Sbjct: 120 YGVKDSDQLHFIRHASNNCG-ARRKRSKKRVFHLKQHRRLSQANYCKQKENCDADEDDDD 178

Query: 443 XXXXXXXEVTQNGKIKPHIEEEGVGKSKLTGFIG 342
                  E  +N + K HIEE  V K+K+TGF+G
Sbjct: 179 GDISSDEEALENAETKHHIEEVHVRKNKITGFVG 212



 Score = 25.8 bits (55), Expect(2) = 3e-61
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 369 KEQVNWLHRSGVLIHPTGNCEKN 301
           K ++       V+IH TG+CEKN
Sbjct: 204 KNKITGFVGRAVIIHTTGSCEKN 226


>gb|AFK48583.1| unknown [Lotus japonicus]
          Length = 220

 Score =  220 bits (561), Expect = 4e-55
 Identities = 113/172 (65%), Positives = 130/172 (75%), Gaps = 7/172 (4%)
 Frame = -2

Query: 953 MAETRLIVPS----VKNTRRSQFP--SSLGIFSSNKSFFYDKLPSQPLRLSVLKLDASSF 792
           MAET LI+ +    +K+ +  QF   S +    + KSF Y KLPSQP RLSVLKLD SSF
Sbjct: 1   MAETSLILTTTTEKIKSRKLLQFSTISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSF 60

Query: 791 DIQVSKTATVAELKDAVEAVFSHMPQKGPAKISWPHVWGQFCLCYDGQKLIAEEDYLKNY 612
           DIQVSKTA++AELKDAVEAVFSHMP+KGPAKISWPHVWGQFCLCYDGQKL+ EEDYL+NY
Sbjct: 61  DIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNY 120

Query: 611 GIKDGDQLRFVRHVSNNCGXXXXXXXXXXXVHLKQHR-RSSQVNNCEPKENC 459
           GIKDGD+L F+ HVSNNC               K+ R RSSQVN+CEP+ENC
Sbjct: 121 GIKDGDELHFMCHVSNNCTVRRKRPKKRVLRLKKRRRSRSSQVNSCEPEENC 172


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