BLASTX nr result

ID: Glycyrrhiza23_contig00012068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012068
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-l...   529   e-148
ref|XP_002307758.1| high mobility group family [Populus trichoca...   442   e-121
gb|ABK95398.1| unknown [Populus trichocarpa]                          441   e-121
ref|XP_002510615.1| transcription factor, putative [Ricinus comm...   417   e-114
gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...   411   e-112

>ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-like [Glycine max]
          Length = 322

 Score =  529 bits (1363), Expect = e-148
 Identities = 261/334 (78%), Positives = 285/334 (85%)
 Frame = -3

Query: 1216 MSSVARSNGSGGGDDGKHYPLPLASHNDVVYDPTLFWDTLRRFHFVMGTKFMIPVIGGKE 1037
            MSS AR+ G   G++GKHYP PLA H  VV D TLFWDTLRRFHFVMGTKFMIPVIGGKE
Sbjct: 1    MSSAARTPG---GEEGKHYPAPLAPHEGVVKDSTLFWDTLRRFHFVMGTKFMIPVIGGKE 57

Query: 1036 LDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFRFSATTTSASFVLRKHYFSLLYHYEQVH 857
            LDLHVLYVEVTRRSGYEKVVAEKKWREVGSVF+F+ATTTSASFVLRKHYFSLLYHYEQVH
Sbjct: 58   LDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFAATTTSASFVLRKHYFSLLYHYEQVH 117

Query: 856  FFKVRGPVYTPSADAFSGSSPSWKPELAIVQFSPKPLNYGPESESHAEVLRVDNSCLLGT 677
            FFK RGP+YTPSADAFSG+SPSW+PELAIV++SPKP++  PES +       D SCL G 
Sbjct: 118  FFKARGPIYTPSADAFSGNSPSWRPELAIVEYSPKPMDNSPESRAE------DTSCLSGN 171

Query: 676  GTIEGKFDCGYIVSVKLGSEVLKGVLYHPEQQLVPGSPSVLQHDSAIVPFDXXXXXXXXX 497
            GTIEGKFDCGY+VSVKLGSEVL+GVLYHPEQ + P  PS+ +H+SAIVP +         
Sbjct: 172  GTIEGKFDCGYLVSVKLGSEVLRGVLYHPEQLVPP--PSIPKHESAIVPIN-RKPHRSGR 228

Query: 496  XXXXXXKWDPNYPKPNRSGYNFFFAEKHYKLKELYPNREREFTKMIGQSWNSLSPEERMV 317
                  +WDPNYPKPNRSGYNFFFAEKHY LK LYPNREREFTKMIGQSWNSLSPEERMV
Sbjct: 229  RKKNKRRWDPNYPKPNRSGYNFFFAEKHYTLKTLYPNREREFTKMIGQSWNSLSPEERMV 288

Query: 316  YQNIGLRDKERYKRELTEYKEKMKVRQSEELGRP 215
            YQNIGLRDKERYKRELTEYKEKMK+RQ+ E+GRP
Sbjct: 289  YQNIGLRDKERYKRELTEYKEKMKLRQTSEVGRP 322


>ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
            gi|222857207|gb|EEE94754.1| high mobility group family
            [Populus trichocarpa]
          Length = 329

 Score =  442 bits (1137), Expect = e-121
 Identities = 225/319 (70%), Positives = 256/319 (80%)
 Frame = -3

Query: 1180 GDDGKHYPLPLASHNDVVYDPTLFWDTLRRFHFVMGTKFMIPVIGGKELDLHVLYVEVTR 1001
            G + KHYP PLASH DVV DP++FWDTLRRFHFVMGTKFMIPVIGGKELDL VLYVE T 
Sbjct: 12   GMENKHYPAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQVLYVETTN 71

Query: 1000 RSGYEKVVAEKKWREVGSVFRFSATTTSASFVLRKHYFSLLYHYEQVHFFKVRGPVYTPS 821
            R GY+KVVAEKKWREVGSVF FSATTTSASFVL+KHYFSLLYHYEQVHFFK++GPV TP 
Sbjct: 72   RGGYDKVVAEKKWREVGSVFCFSATTTSASFVLKKHYFSLLYHYEQVHFFKIQGPVSTP- 130

Query: 820  ADAFSGSSPSWKPELAIVQFSPKPLNYGPESESHAEVLRVDNSCLLGTGTIEGKFDCGYI 641
            A AF   SPS K ELAIV++SP+P+   P+  + +      +S    +GTIEGKFDCGY+
Sbjct: 131  AVAFPLGSPSSKTELAIVEYSPEPIRDCPDPSTES------SSSFSASGTIEGKFDCGYL 184

Query: 640  VSVKLGSEVLKGVLYHPEQQLVPGSPSVLQHDSAIVPFDXXXXXXXXXXXXXXXKWDPNY 461
            VSV+LGSEVL GVLYHP+QQ +  S S+ Q+D AIVP+                  DP+Y
Sbjct: 185  VSVQLGSEVLHGVLYHPDQQDL--SNSIPQYDGAIVPYTPNRRRRRRRSRRSG---DPSY 239

Query: 460  PKPNRSGYNFFFAEKHYKLKELYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERY 281
            PKPNRSGYNFFFAEKHYKLK LYPNREREFTKMIGQSW+SLS EERMVYQNIGL+DKERY
Sbjct: 240  PKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERY 299

Query: 280  KRELTEYKEKMKVRQSEEL 224
            KREL EYKEK+++RQ+ E+
Sbjct: 300  KRELKEYKEKLQLRQAMEV 318


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  441 bits (1134), Expect = e-121
 Identities = 224/317 (70%), Positives = 255/317 (80%)
 Frame = -3

Query: 1174 DGKHYPLPLASHNDVVYDPTLFWDTLRRFHFVMGTKFMIPVIGGKELDLHVLYVEVTRRS 995
            + KHYP PLASH DVV DP++FWDTLRRFHFVMGTKFMIPVIGGKELDL VLYVE T R 
Sbjct: 2    ENKHYPAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQVLYVETTNRG 61

Query: 994  GYEKVVAEKKWREVGSVFRFSATTTSASFVLRKHYFSLLYHYEQVHFFKVRGPVYTPSAD 815
            GY+KVVAEKKWREVGSVF FSATTTSASFVL+KHYFSLLYHYEQVHFFK++GPV TP A 
Sbjct: 62   GYDKVVAEKKWREVGSVFCFSATTTSASFVLKKHYFSLLYHYEQVHFFKIQGPVSTP-AV 120

Query: 814  AFSGSSPSWKPELAIVQFSPKPLNYGPESESHAEVLRVDNSCLLGTGTIEGKFDCGYIVS 635
            AF   SPS K ELAIV++SP+P+   P+  + +      +S    +GTIEGKFDCGY+VS
Sbjct: 121  AFPLGSPSSKTELAIVEYSPEPIRDCPDPSTES------SSSFSASGTIEGKFDCGYLVS 174

Query: 634  VKLGSEVLKGVLYHPEQQLVPGSPSVLQHDSAIVPFDXXXXXXXXXXXXXXXKWDPNYPK 455
            V+LGSEVL GVLYHP+QQ +  S S+ Q+D AIVP+                  DP+YPK
Sbjct: 175  VQLGSEVLHGVLYHPDQQDL--SNSIPQYDGAIVPYTPNRRRRRRRSRRSG---DPSYPK 229

Query: 454  PNRSGYNFFFAEKHYKLKELYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKR 275
            PNRSGYNFFFAEKHYKLK LYPNREREFTKMIGQSW+SLS EERMVYQNIGL+DKERYKR
Sbjct: 230  PNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKR 289

Query: 274  ELTEYKEKMKVRQSEEL 224
            EL EYKEK+++RQ+ E+
Sbjct: 290  ELKEYKEKLQLRQAMEV 306


>ref|XP_002510615.1| transcription factor, putative [Ricinus communis]
            gi|223551316|gb|EEF52802.1| transcription factor,
            putative [Ricinus communis]
          Length = 338

 Score =  417 bits (1071), Expect = e-114
 Identities = 206/318 (64%), Positives = 247/318 (77%), Gaps = 3/318 (0%)
 Frame = -3

Query: 1168 KHYPLPLASHNDVVYDPTLFWDTLRRFHFVMGTKFMIPVIGGKELDLHVLYVEVTRRSGY 989
            +HYP PLASH+ +V DP  FWDTLRRFH +M TKFMIPVIGG+ELDLH+LYVE T+R GY
Sbjct: 18   RHYPTPLASHDKIVEDPITFWDTLRRFHSLMSTKFMIPVIGGRELDLHILYVEATKRGGY 77

Query: 988  EKVVAEKKWREVGSVFRFSATTTSASFVLRKHYFSLLYHYEQVHFFKVRGPVYTPSADAF 809
            EKVVA+KKWREVGSVF+FS TTTSASFVLRKHYF LLYHYEQVHFFKV+GP+ + SA AF
Sbjct: 78   EKVVADKKWREVGSVFKFSPTTTSASFVLRKHYFGLLYHYEQVHFFKVQGPM-SSSAAAF 136

Query: 808  SGSSPSWKPELAIVQFSPKPLNYGPESESHAEVLRVDNSCLLGTGTIEGKFDCGYIVSVK 629
             G+S  ++PELAIV++SP+ + + PE  S        +S     GTI+GKFDCGY+VSV+
Sbjct: 137  PGNSTLFRPELAIVEYSPEVIKHRPEPPSEG------SSSFSALGTIDGKFDCGYLVSVR 190

Query: 628  LGSEVLKGVLYHPEQQLVPGSPSVLQHDSAIVPFD---XXXXXXXXXXXXXXXKWDPNYP 458
            +GSEVL GVLYHP+Q     S     +D+A++P+                     DP+YP
Sbjct: 191  VGSEVLSGVLYHPDQPQHSFSSISQCNDNALIPYTGSRRRDHSARRRRRRSRRAGDPSYP 250

Query: 457  KPNRSGYNFFFAEKHYKLKELYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYK 278
            KPNRSGYNFFFAEKHYKLK LYPNREREFTK+IGQSW++LS EERMVYQNIGL+DKERYK
Sbjct: 251  KPNRSGYNFFFAEKHYKLKSLYPNREREFTKIIGQSWSNLSAEERMVYQNIGLKDKERYK 310

Query: 277  RELTEYKEKMKVRQSEEL 224
            REL EYKE++K+R++ EL
Sbjct: 311  RELKEYKERLKLRETMEL 328


>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score =  411 bits (1057), Expect = e-112
 Identities = 214/326 (65%), Positives = 247/326 (75%), Gaps = 1/326 (0%)
 Frame = -3

Query: 1216 MSSVARSNGSGGGDDGKHYPLPLASHNDVVYDPTLFWDTLRRFHFVMGTKFMIPVIGGKE 1037
            MS  AR+    GG D KHYP PLA+H++V+ DP +FWDTLRRFHF+M TKFMIPVIGGKE
Sbjct: 1    MSPPARTKTWNGGLD-KHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKE 59

Query: 1036 LDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFRFSATTTSASFVLRKHYFSLLYHYEQVH 857
            LDLHVLY EVTRR G+EKVVAEKKWREVGSVF+FS TTTSASFVLRKHY SLLYHYEQV+
Sbjct: 60   LDLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVY 119

Query: 856  FFKVRGPVYTPSADAFSGSSPSWKPELAIVQFSPKPLNYGPESESHAEVLRVDNSCLLGT 677
             F  +GP+  P A  FS  SP+ + ELA+V+++PK  ++ P   S              T
Sbjct: 120  LFGRQGPICVPQA-PFSFGSPTSENELALVEYTPKTTSFSPGPPSEV------------T 166

Query: 676  GTIEGKFDCGYIVSVKLGSEVLKGVLYHPEQQLVPGSPSVLQHDSAIVPF-DXXXXXXXX 500
            GTI+GKFDCGY+V+VKLGSEVL+GVLYHPEQ   P S       +AIVP+          
Sbjct: 167  GTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP--PPSDLRPLSTNAIVPYTGGRHRHSGR 224

Query: 499  XXXXXXXKWDPNYPKPNRSGYNFFFAEKHYKLKELYPNREREFTKMIGQSWNSLSPEERM 320
                   K DPN+PKPNRSGYNFFFAEKHYKLK LYPNREREFTKMIG+SWN+LSPEERM
Sbjct: 225  RHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERM 284

Query: 319  VYQNIGLRDKERYKRELTEYKEKMKV 242
            VYQNIGL+DKERY+REL EYKEKM++
Sbjct: 285  VYQNIGLKDKERYRRELKEYKEKMRM 310


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