BLASTX nr result

ID: Glycyrrhiza23_contig00012032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00012032
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555216.1| PREDICTED: pre-mRNA-splicing factor syf2-lik...   559   e-157
ref|NP_001241898.1| uncharacterized protein LOC100787714 [Glycin...   550   e-154
ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-lik...   493   e-137
ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   480   e-133
ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|2...   468   e-129

>ref|XP_003555216.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Glycine max]
          Length = 411

 Score =  559 bits (1440), Expect = e-157
 Identities = 281/357 (78%), Positives = 306/357 (85%), Gaps = 2/357 (0%)
 Frame = +1

Query: 34   KCSNPNPIPNXXXXXXXXXXXXXXXXXQQRNR*GLQGIIILLHDMSEERAVHPDCRNASN 213
            K SNPN IPN                  + +   LQG I L HDMS+ERAVHPDCRNASN
Sbjct: 69   KFSNPNSIPNSASC-------------SEIDSVSLQGKISL-HDMSDERAVHPDCRNASN 114

Query: 214  PFHECSDYCFRVIAEAKIRMQQQESEVAQASGGSGREHAIPDESYPDERLHDDRPKPEEN 393
            P+HECSDYCFRVIAEAKIR QQQESEV QASGG+  + AIPDESY ++ +H+ RP  EEN
Sbjct: 115  PYHECSDYCFRVIAEAKIRSQQQESEVGQASGGNNSKQAIPDESYVEKEIHNGRPDLEEN 174

Query: 394  SDSEPDQPAAEEMEGA--YPKLSGRQKKLMELRAKMNEAKKRNQIEIAAEKKRMESPTES 567
            SDS+PDQPA +E E    Y KLS RQKK MELR+KM EAKKRNQIEIAAEKKRME+PTES
Sbjct: 175  SDSDPDQPAVQEAEQEVDYTKLSARQKKWMELRSKMQEAKKRNQIEIAAEKKRMEAPTES 234

Query: 568  RGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQQAAEEKYKKWEKDPAPAGWDVFNQ 747
            RGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ+AAEEKYKKWEKDPAP GWDVFNQ
Sbjct: 235  RGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEEKYKKWEKDPAPFGWDVFNQ 294

Query: 748  KTLYNAYKKRTKKIDIDLEEYNRMKEADPEFYREASSLQYGKAPKTSEDKIDKMVQELKD 927
            KTLYNAYKKRTK +++D+EEYNRMKEADPEFYR+ASSLQYGKAPK SE+KID+MV+ELKD
Sbjct: 295  KTLYNAYKKRTKNVEVDVEEYNRMKEADPEFYRDASSLQYGKAPKISEEKIDRMVRELKD 354

Query: 928  RDEKRKSFSRRRKYHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 1098
            RDEKR SFSRRR++HEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 355  RDEKRNSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 411


>ref|NP_001241898.1| uncharacterized protein LOC100787714 [Glycine max]
            gi|255636854|gb|ACU18760.1| unknown [Glycine max]
          Length = 314

 Score =  550 bits (1418), Expect = e-154
 Identities = 271/314 (86%), Positives = 288/314 (91%), Gaps = 3/314 (0%)
 Frame = +1

Query: 166  MSEERAVHPDCRNASNPFHECSDYCFRVIAEAKIRMQQQESEVAQASGGSGREHAIPDES 345
            MS+ERAVHPDCRNASNP+HECSDYCFRVIAEAKIR QQQESEV QASGGS  + AIPDES
Sbjct: 1    MSDERAVHPDCRNASNPYHECSDYCFRVIAEAKIRSQQQESEVGQASGGSNSKQAIPDES 60

Query: 346  YPDERLHDDRPKPEENSDSEPDQPA---AEEMEGAYPKLSGRQKKLMELRAKMNEAKKRN 516
            Y  E +HDDRP  EENSDS+PDQPA   AE+ E  Y KLS RQKK MELRAKM EAKKRN
Sbjct: 61   YLGEEIHDDRPDLEENSDSDPDQPALQEAEQEEVDYTKLSARQKKWMELRAKMQEAKKRN 120

Query: 517  QIEIAAEKKRMESPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQQAAEEKY 696
            QIEIAAEKKRME+PTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ+AAEEKY
Sbjct: 121  QIEIAAEKKRMEAPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEEKY 180

Query: 697  KKWEKDPAPAGWDVFNQKTLYNAYKKRTKKIDIDLEEYNRMKEADPEFYREASSLQYGKA 876
            KKWEKDPAP GWDVFNQKTLYNAYKKRTK +++D+EEYNRMKEAD EFYR+AS LQYGKA
Sbjct: 181  KKWEKDPAPFGWDVFNQKTLYNAYKKRTKNVEVDVEEYNRMKEADSEFYRDASCLQYGKA 240

Query: 877  PKTSEDKIDKMVQELKDRDEKRKSFSRRRKYHEEKDIDSINDRNEHFNKKIERAFGKYTL 1056
            PK SE+KIDKMVQELK+RDEKR SFSRRR++HEEKDIDSINDRNEHFNKKIERAFGKYTL
Sbjct: 241  PKISEEKIDKMVQELKNRDEKRNSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTL 300

Query: 1057 EIKNNLERGTALPD 1098
            EIKNNLERGTALPD
Sbjct: 301  EIKNNLERGTALPD 314


>ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Cucumis sativus]
            gi|449489629|ref|XP_004158369.1| PREDICTED:
            pre-mRNA-splicing factor syf2-like [Cucumis sativus]
          Length = 310

 Score =  493 bits (1268), Expect = e-137
 Identities = 239/312 (76%), Positives = 270/312 (86%), Gaps = 1/312 (0%)
 Frame = +1

Query: 166  MSEERAVHPDCRNASNPFHECSDYCFRVIAEAKIRMQQQESEVAQASGGSGREHAIPDES 345
            MS+E  VHPDCRNASNP+HECS+YCF+VIAE K R Q+ E E  QA   SG    +P + 
Sbjct: 1    MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPETVQAGRSSGSSSFVPPDE 60

Query: 346  YPDERLHDDRPKPEENSDSEPDQPAAEE-MEGAYPKLSGRQKKLMELRAKMNEAKKRNQI 522
            Y D  LHD++P  E +SD + D+ + EE +EG + KL+GR+KKL E+R KMNEA+K NQ 
Sbjct: 61   YED--LHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQT 118

Query: 523  EIAAEKKRMESPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQQAAEEKYKK 702
             IAAEKK+ME P+ESRG+SKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ+AAE KYKK
Sbjct: 119  AIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKK 178

Query: 703  WEKDPAPAGWDVFNQKTLYNAYKKRTKKIDIDLEEYNRMKEADPEFYREASSLQYGKAPK 882
            WEKDPAP GWDVFNQKTLYNAYKKRTK ++IDLEEYN+MKE+DPEFYREASSLQYGKAPK
Sbjct: 179  WEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPK 238

Query: 883  TSEDKIDKMVQELKDRDEKRKSFSRRRKYHEEKDIDSINDRNEHFNKKIERAFGKYTLEI 1062
             SEDKID MV+ELKDRDEKRKSFSRRRK+HE+KDIDSINDRNEHFNKKIERAFG+YTLEI
Sbjct: 239  ISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEI 298

Query: 1063 KNNLERGTALPD 1098
            KNNLERGTALPD
Sbjct: 299  KNNLERGTALPD 310


>ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 1 [Vitis vinifera]
            gi|297744598|emb|CBI37860.3| unnamed protein product
            [Vitis vinifera]
          Length = 313

 Score =  480 bits (1235), Expect = e-133
 Identities = 234/316 (74%), Positives = 266/316 (84%), Gaps = 5/316 (1%)
 Frame = +1

Query: 166  MSEERAVHPDCRNASNPFHECSDYCFRVIAEAKIRMQQQESEVAQASGGSGREH-----A 330
            M+ ER VHPDC NASNP+HEC +YCFR IAEAK +M ++ESEV +A  GSG  +      
Sbjct: 1    MAGERRVHPDCINASNPYHECVEYCFRKIAEAKAQMDKKESEVMEAGSGSGGGNDQYISG 60

Query: 331  IPDESYPDERLHDDRPKPEENSDSEPDQPAAEEMEGAYPKLSGRQKKLMELRAKMNEAKK 510
            +PD+   D+  HD+   PEE SD + DQP  E  E  + +L+GRQKKL ELR KMNEA+K
Sbjct: 61   VPDQ---DKNTHDEGTDPEERSDDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARK 117

Query: 511  RNQIEIAAEKKRMESPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQQAAEE 690
             NQ  + AEKK+ME+P ESRG+SKQKW+E+RKKKIGKLLD NGLDM KAYMLDTQ+ AE 
Sbjct: 118  ANQTAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAET 177

Query: 691  KYKKWEKDPAPAGWDVFNQKTLYNAYKKRTKKIDIDLEEYNRMKEADPEFYREASSLQYG 870
            KYKKWEKDPAP GWDVFNQKTLYNAYKKRTK I++D++EYN+MKEADPEFYREASSLQYG
Sbjct: 178  KYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYG 237

Query: 871  KAPKTSEDKIDKMVQELKDRDEKRKSFSRRRKYHEEKDIDSINDRNEHFNKKIERAFGKY 1050
            KAPK SEDKIDKMV+ELKDRDEKR+SFSRRRK+HEEKDIDSINDRNEHFNKKIERAFGKY
Sbjct: 238  KAPKCSEDKIDKMVKELKDRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKY 297

Query: 1051 TLEIKNNLERGTALPD 1098
            TLEIKNNLERGTALPD
Sbjct: 298  TLEIKNNLERGTALPD 313


>ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|222848492|gb|EEE86039.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  468 bits (1204), Expect = e-129
 Identities = 228/311 (73%), Positives = 265/311 (85%)
 Frame = +1

Query: 166  MSEERAVHPDCRNASNPFHECSDYCFRVIAEAKIRMQQQESEVAQASGGSGREHAIPDES 345
            M++ER VHPDC NASNP+HEC +YCF  IAEAK R + +E+EV QA GG G   +   E 
Sbjct: 1    MADERRVHPDCINASNPYHECVEYCFIKIAEAKARAEIKETEVVQAKGGIGWSSSQAPEQ 60

Query: 346  YPDERLHDDRPKPEENSDSEPDQPAAEEMEGAYPKLSGRQKKLMELRAKMNEAKKRNQIE 525
               E L ++RP   E+S+ + D+   + +EG   +L+GR+KKL ELR KMNEA+K NQ  
Sbjct: 61   --GEELDEERPD-HEHSEDDDDRAVLDNVEGDVTQLTGRKKKLFELRLKMNEARKANQTA 117

Query: 526  IAAEKKRMESPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQQAAEEKYKKW 705
            + +EKK+ME+P+ESRG+SKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ+AAE KYKKW
Sbjct: 118  MVSEKKKMEAPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEVKYKKW 177

Query: 706  EKDPAPAGWDVFNQKTLYNAYKKRTKKIDIDLEEYNRMKEADPEFYREASSLQYGKAPKT 885
            EKDPAP GWDVFNQKTLYNAYKKRTK +D+DLEEYN+MKEADPEFYREASSLQYGKAPKT
Sbjct: 178  EKDPAPFGWDVFNQKTLYNAYKKRTKNVDVDLEEYNKMKEADPEFYREASSLQYGKAPKT 237

Query: 886  SEDKIDKMVQELKDRDEKRKSFSRRRKYHEEKDIDSINDRNEHFNKKIERAFGKYTLEIK 1065
            SE+KI++MV+ELKDRDE RKSFSRRR++ +EKDIDSINDRNEHFNKKIERAFGKYTLEIK
Sbjct: 238  SEEKIERMVKELKDRDENRKSFSRRRRFRDEKDIDSINDRNEHFNKKIERAFGKYTLEIK 297

Query: 1066 NNLERGTALPD 1098
            NNLERGTALPD
Sbjct: 298  NNLERGTALPD 308


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