BLASTX nr result

ID: Glycyrrhiza23_contig00011990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00011990
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago trun...   365   5e-99
ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   333   2e-89
ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   325   6e-87
ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   297   2e-78
ref|XP_004134969.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   292   6e-77

>ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago truncatula]
           gi|355497702|gb|AES78905.1| Tyrosyl-DNA
           phosphodiesterase [Medicago truncatula]
          Length = 849

 Score =  365 bits (938), Expect = 5e-99
 Identities = 186/257 (72%), Positives = 210/257 (81%), Gaps = 6/257 (2%)
 Frame = -2

Query: 754 MSSSHSQVGYLVPLNQNLEEAASAS--KLAVSDGTNVIGRNNLAVSDKRLSRKHLTITAS 581
           MS SHSQ+GYL+PLN N EE   AS  KL +SDGTN+IGRNN+ V+DKRLSRKHLTITAS
Sbjct: 1   MSFSHSQIGYLIPLNPNSEEKEKASTPKLTISDGTNIIGRNNVPVNDKRLSRKHLTITAS 60

Query: 580 TDGTANLHVEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEK 401
            DGTANLHVEGTNPVVVNSGNKRRKLNSK+TA I DGD+IELIPGH++FKYQV  R    
Sbjct: 61  ADGTANLHVEGTNPVVVNSGNKRRKLNSKQTAAIFDGDVIELIPGHYLFKYQVSQR---- 116

Query: 400 GSSSGVHNEAHD-GIETLSVKRGRNAVAQKAGH---CEEAIRDFHVADDQMPCTFRLLRV 233
            S     N+ H+ G  + + +  + AV QK G    CEE IRDF VADDQ+PCTFRLLRV
Sbjct: 117 -SPKVADNKHHERGKNSATQRHDKIAVTQKHGSSRSCEEPIRDFRVADDQIPCTFRLLRV 175

Query: 232 KELPPWANTSCVSISDVIQGDILVAILSNYMVDIDWLIPACPTLSKVPHVLVIHGESDER 53
           + LPPWANTSCVSISDVIQGDILVA+LSNYMVD+DWL+PACP LSKVPHVLV+HGESDER
Sbjct: 176 QGLPPWANTSCVSISDVIQGDILVAVLSNYMVDVDWLVPACPALSKVPHVLVLHGESDER 235

Query: 52  VDYMKRNKPANWILHKP 2
           V  +KR+KP NWILHKP
Sbjct: 236 VACIKRSKPKNWILHKP 252


>ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 1 [Glycine
           max]
          Length = 610

 Score =  333 bits (855), Expect = 2e-89
 Identities = 173/248 (69%), Positives = 192/248 (77%), Gaps = 3/248 (1%)
 Frame = -2

Query: 736 QVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTITASTDGTANLH 557
           QVGYLVPLN+N +E AS  K AVSDG NVIGRNN+ V DKRLSRKHLT+TAS +G+A+L 
Sbjct: 6   QVGYLVPLNRNFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLL 65

Query: 556 VEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEKGSSSGVHN 377
           VEGTNP+VVNSGNKRRKLN KE ATI +GDIIELIPGHH+FKYQVL              
Sbjct: 66  VEGTNPIVVNSGNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-------------- 111

Query: 376 EAHDGIETLSVKRGRNAVAQKAG---HCEEAIRDFHVADDQMPCTFRLLRVKELPPWANT 206
                        GRNA A+K+    +  EAIR+FHV  DQ+P TFRLL V+ LPPWANT
Sbjct: 112 ------------GGRNADARKSSGEDNSVEAIRNFHVPSDQIPSTFRLLHVQGLPPWANT 159

Query: 205 SCVSISDVIQGDILVAILSNYMVDIDWLIPACPTLSKVPHVLVIHGESDERVDYMKRNKP 26
           SCVSI DVIQGDI VAILSNYMVDIDWL+PACP LSKVPHVLVIHGESD RVDY+KR+KP
Sbjct: 160 SCVSIGDVIQGDIKVAILSNYMVDIDWLVPACPALSKVPHVLVIHGESDGRVDYIKRSKP 219

Query: 25  ANWILHKP 2
           ANWILHKP
Sbjct: 220 ANWILHKP 227


>ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 2 [Glycine
           max]
          Length = 599

 Score =  325 bits (834), Expect = 6e-87
 Identities = 169/245 (68%), Positives = 185/245 (75%)
 Frame = -2

Query: 736 QVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTITASTDGTANLH 557
           QVGYLVPLN+N +E AS  K AVSDG NVIGRNN+ V DKRLSRKHLT+TAS +G+A+L 
Sbjct: 6   QVGYLVPLNRNFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLL 65

Query: 556 VEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEKGSSSGVHN 377
           VEGTNP+VVNSGNKRRKLN KE ATI +GDIIELIPGHH+FKYQ          SSG  N
Sbjct: 66  VEGTNPIVVNSGNKRRKLNPKEEATICNGDIIELIPGHHLFKYQ----------SSGEDN 115

Query: 376 EAHDGIETLSVKRGRNAVAQKAGHCEEAIRDFHVADDQMPCTFRLLRVKELPPWANTSCV 197
                                     EAIR+FHV  DQ+P TFRLL V+ LPPWANTSCV
Sbjct: 116 SV------------------------EAIRNFHVPSDQIPSTFRLLHVQGLPPWANTSCV 151

Query: 196 SISDVIQGDILVAILSNYMVDIDWLIPACPTLSKVPHVLVIHGESDERVDYMKRNKPANW 17
           SI DVIQGDI VAILSNYMVDIDWL+PACP LSKVPHVLVIHGESD RVDY+KR+KPANW
Sbjct: 152 SIGDVIQGDIKVAILSNYMVDIDWLVPACPALSKVPHVLVIHGESDGRVDYIKRSKPANW 211

Query: 16  ILHKP 2
           ILHKP
Sbjct: 212 ILHKP 216


>ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 959

 Score =  297 bits (761), Expect = 2e-78
 Identities = 153/270 (56%), Positives = 187/270 (69%), Gaps = 14/270 (5%)
 Frame = -2

Query: 769  SELRGMSSSHSQVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTI 590
            S L  + S   +VGYLVPL++NLE   S  K+ +S+G N IGR+N+ VS+KR+SRKH+T+
Sbjct: 307  SNLFSVFSCGKKVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITL 366

Query: 589  TASTDGTANLHVEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRG 410
            T STDG+A L V+GTNPVV+NSG+ R+KL  +E+  I DGD+IELIPGH+ FKY      
Sbjct: 367  TTSTDGSAKLLVDGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKYASHCFN 426

Query: 409  GEKGSSS----GVHNEAHDGIETLSVKRGR----------NAVAQKAGHCEEAIRDFHVA 272
               GS       V   AHD I     KR             +   K  +  EAIR+FH+ 
Sbjct: 427  SRPGSEDLGQKRVRQVAHDKISERVAKRAEMGSPLENMQSGSSKSKEANSVEAIRNFHIP 486

Query: 271  DDQMPCTFRLLRVKELPPWANTSCVSISDVIQGDILVAILSNYMVDIDWLIPACPTLSKV 92
            DD++P TFRLL VK LPPWANTSCV I+D+IQGDIL A+LSNYMVDIDWLIPACPTL+K+
Sbjct: 487  DDRLPMTFRLLSVKGLPPWANTSCVRITDIIQGDILFAVLSNYMVDIDWLIPACPTLAKI 546

Query: 91   PHVLVIHGESDERVDYMKRNKPANWILHKP 2
            P VLVIHGE D  +D MKR KPANWILHKP
Sbjct: 547  PQVLVIHGEGDGTLDNMKRKKPANWILHKP 576


>ref|XP_004134969.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 613

 Score =  292 bits (748), Expect = 6e-77
 Identities = 150/245 (61%), Positives = 182/245 (74%)
 Frame = -2

Query: 736 QVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTITASTDGTANLH 557
           QVGYLVPL++NLE   S  K+ +S+G N IGR+N+ VS+KR+SRKH+T+T STDG+A L 
Sbjct: 5   QVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITLTTSTDGSAKLL 64

Query: 556 VEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEKGSSSGVHN 377
           VEGTNPVV+NSG+ R+KL  +E+  I DGD+IELIPGH+ FKY           +S   N
Sbjct: 65  VEGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKY-----------ASHCFN 113

Query: 376 EAHDGIETLSVKRGRNAVAQKAGHCEEAIRDFHVADDQMPCTFRLLRVKELPPWANTSCV 197
            +  G E L  KR R     +  +  EAIR+FH+ DD++P TFRLL VK LPPWANTSCV
Sbjct: 114 -SRPGSEDLGQKRVR-----QEANSVEAIRNFHIPDDRLPMTFRLLSVKGLPPWANTSCV 167

Query: 196 SISDVIQGDILVAILSNYMVDIDWLIPACPTLSKVPHVLVIHGESDERVDYMKRNKPANW 17
            I+D+IQGDIL A+LSNYMVDIDWLIPACP L+KVP VLVIHGE D  +D MKR KPANW
Sbjct: 168 RITDIIQGDILFAVLSNYMVDIDWLIPACPALAKVPQVLVIHGEGDGTLDNMKRKKPANW 227

Query: 16  ILHKP 2
           ILHKP
Sbjct: 228 ILHKP 232


Top